RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 OR10V1Q8NGI7 309 aa19.2■□□□□ 0.66
SRRM1-222ENST00000596378 LYPD6BQ8NI32 183 aa19.2■□□□□ 0.66
SRRM1-222ENST00000596378 OBP2BQ9NPH6 170 aa19.2■□□□□ 0.66
SRRM1-222ENST00000596378 TAAR3PQ9P1P4 343 aa19.2■□□□□ 0.66
SRRM1-222ENST00000596378 PURGQ9UJV8 347 aaKnown RBP19.2■□□□□ 0.66
SRRM1-222ENST00000596378 TFF1P04155 84 aa19.19■□□□□ 0.66
SRRM1-222ENST00000596378 CAMLGP49069 296 aa19.19■□□□□ 0.66
SRRM1-222ENST00000596378 TESK1Q15569 626 aa19.19■□□□□ 0.66
SRRM1-222ENST00000596378 TMEM182Q6ZP80 229 aaPredicted RBP19.19■□□□□ 0.66
SRRM1-222ENST00000596378 SPAG16Q8N0X2 631 aa19.19■□□□□ 0.66
SRRM1-222ENST00000596378 WDR31Q8NA23 367 aa19.19■□□□□ 0.66
SRRM1-222ENST00000596378 TMEM171Q8WVE6 324 aa19.19■□□□□ 0.66
SRRM1-222ENST00000596378 A0A1B0GV50 99 aa19.19■□□□□ 0.66
SRRM1-222ENST00000596378 FAM157AC9JC47 383 aa19.19■□□□□ 0.66
SRRM1-222ENST00000596378 WNT9BO14905 357 aa19.19■□□□□ 0.66
SRRM1-222ENST00000596378 MLNRO43193 412 aa19.19■□□□□ 0.66
SRRM1-222ENST00000596378 CST7O76096 145 aa19.19■□□□□ 0.66
SRRM1-222ENST00000596378 TSPAN15O95858 294 aa19.19■□□□□ 0.66
SRRM1-222ENST00000596378 PRH1P02810 166 aa19.19■□□□□ 0.66
SRRM1-222ENST00000596378 PVALBP20472 110 aaPredicted RBP19.19■□□□□ 0.66
SRRM1-222ENST00000596378 NFYBP25208 207 aa19.19■□□□□ 0.66
SRRM1-222ENST00000596378 TMEM252Q8N6L7 170 aa19.19■□□□□ 0.66
SRRM1-222ENST00000596378 LYRM2Q9NU23 88 aaPredicted RBP19.19■□□□□ 0.66
SRRM1-222ENST00000596378 CACFD1Q9UGQ2 172 aa19.19■□□□□ 0.66
SRRM1-222ENST00000596378 PPP1R3CQ9UQK1 317 aa19.19■□□□□ 0.66
SRRM1-222ENST00000596378 NBEAQ8NFP9 2946 aa19.19■□□□□ 0.66
SRRM1-222ENST00000596378 INTS1Q8N201 2190 aaKnown RBP19.19■□□□□ 0.66
SRRM1-222ENST00000596378 TRAV17A0A0B4J275 112 aa19.18■□□□□ 0.66
SRRM1-222ENST00000596378 CLEC18AA5D8T8 446 aa19.18■□□□□ 0.66
SRRM1-222ENST00000596378 ATP6V1G2-DDX39BF2Z307 99 aa19.18■□□□□ 0.66
SRRM1-222ENST00000596378 AQP7O14520 342 aa19.18■□□□□ 0.66
SRRM1-222ENST00000596378 VAMP2P63027 116 aa19.18■□□□□ 0.66
SRRM1-222ENST00000596378 Q8IYB0 196 aa19.18■□□□□ 0.66
SRRM1-222ENST00000596378 TMEM217Q8N7C4 229 aa19.18■□□□□ 0.66
SRRM1-222ENST00000596378 CLEC18CQ8NCF0 446 aa19.18■□□□□ 0.66
SRRM1-222ENST00000596378 ZNF318Q5VUA4 2279 aa19.18■□□□□ 0.66
SRRM1-222ENST00000596378 HSPA12AO43301 675 aa19.18■□□□□ 0.66
SRRM1-222ENST00000596378 MDH2P40926 338 aaKnown RBP19.18■□□□□ 0.66
SRRM1-222ENST00000596378 ID3Q02535 119 aa19.18■□□□□ 0.66
SRRM1-222ENST00000596378 DUXBA0A1W2PPF3 345 aa19.17■□□□□ 0.66
SRRM1-222ENST00000596378 CHST1O43916 411 aa19.17■□□□□ 0.66
SRRM1-222ENST00000596378 SNAPINO95295 136 aa19.17■□□□□ 0.66
SRRM1-222ENST00000596378 HOXC12P31275 282 aa19.17■□□□□ 0.66
SRRM1-222ENST00000596378 DVL1P1P54792 670 aaPredicted RBP19.17■□□□□ 0.66
SRRM1-222ENST00000596378 GPR146Q96CH1 333 aa19.17■□□□□ 0.66
SRRM1-222ENST00000596378 AKR1E2Q96JD6 320 aa19.17■□□□□ 0.66
SRRM1-222ENST00000596378 ESRP2Q9H6T0 727 aaKnown RBP19.17■□□□□ 0.66
SRRM1-222ENST00000596378 PLEKHF2Q9H8W4 249 aa19.17■□□□□ 0.66
SRRM1-222ENST00000596378 C19orf12Q9NSK7 152 aa19.17■□□□□ 0.66
SRRM1-222ENST00000596378 LUZP4Q9P127 313 aa19.17■□□□□ 0.66
SRRM1-222ENST00000596378 PSPNO60542 156 aa19.17■□□□□ 0.66
SRRM1-222ENST00000596378 IGKV3-15P01624 115 aa19.17■□□□□ 0.66
SRRM1-222ENST00000596378 SERPINE2P07093 398 aa19.17■□□□□ 0.66
SRRM1-222ENST00000596378 CBR1P16152 277 aa19.17■□□□□ 0.66
SRRM1-222ENST00000596378 ZNF146Q15072 292 aa19.17■□□□□ 0.66
SRRM1-222ENST00000596378 OR5C1Q8NGR4 320 aa19.17■□□□□ 0.66
SRRM1-222ENST00000596378 KCNS2Q9ULS6 477 aa19.17■□□□□ 0.66
SRRM1-222ENST00000596378 RBM7Q9Y580 266 aaKnown RBP19.17■□□□□ 0.66
SRRM1-222ENST00000596378 PTPRBP23467 1997 aa19.16■□□□□ 0.66
SRRM1-222ENST00000596378 CACNA1GO43497 2377 aa19.16■□□□□ 0.66
SRRM1-222ENST00000596378 SH2D1BO14796 132 aa19.16■□□□□ 0.66
SRRM1-222ENST00000596378 COX5AP20674 150 aa19.16■□□□□ 0.66
SRRM1-222ENST00000596378 SNCAP37840 140 aa19.16■□□□□ 0.66
SRRM1-222ENST00000596378 PPT1P50897 306 aa19.16■□□□□ 0.66
SRRM1-222ENST00000596378 TAAR6Q96RI8 345 aa19.16■□□□□ 0.66
SRRM1-222ENST00000596378 H3BP45 60 aa19.16■□□□□ 0.66
SRRM1-222ENST00000596378 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP19.16■□□□□ 0.66
SRRM1-222ENST00000596378 WDR1O75083 606 aa19.16■□□□□ 0.66
SRRM1-222ENST00000596378 HAND1O96004 215 aa19.16■□□□□ 0.66
SRRM1-222ENST00000596378 IGKV1-39P01597 117 aa19.16■□□□□ 0.66
SRRM1-222ENST00000596378 IGKV1D-39P04432 117 aa19.16■□□□□ 0.66
SRRM1-222ENST00000596378 ZNF16P17020 682 aaPredicted RBP19.16■□□□□ 0.66
SRRM1-222ENST00000596378 S100GP29377 79 aa19.16■□□□□ 0.66
SRRM1-222ENST00000596378 DYNLT3P51808 116 aa19.16■□□□□ 0.66
SRRM1-222ENST00000596378 FAM53AQ6NSI3 398 aaPredicted RBP19.16■□□□□ 0.66
SRRM1-222ENST00000596378 OPN3Q9H1Y3 402 aaPredicted RBP19.16■□□□□ 0.66
SRRM1-222ENST00000596378 TREM2Q9NZC2 230 aa19.16■□□□□ 0.66
SRRM1-222ENST00000596378 PITX3O75364 302 aa19.15■□□□□ 0.66
SRRM1-222ENST00000596378 CECR9P0C854 216 aa19.15■□□□□ 0.66
SRRM1-222ENST00000596378 PRAMEF6Q5VXH4 476 aa19.15■□□□□ 0.66
SRRM1-222ENST00000596378 Q6ZRM9 215 aa19.15■□□□□ 0.66
SRRM1-222ENST00000596378 MOB1BQ7L9L4 216 aa19.15■□□□□ 0.66
SRRM1-222ENST00000596378 FAM213BQ8TBF2 198 aa19.15■□□□□ 0.66
SRRM1-222ENST00000596378 IL22RA2Q969J5 263 aa19.15■□□□□ 0.66
SRRM1-222ENST00000596378 SARAFQ96BY9 339 aa19.15■□□□□ 0.66
SRRM1-222ENST00000596378 RNF115Q9Y4L5 304 aa19.15■□□□□ 0.66
SRRM1-222ENST00000596378 MGAQ8IWI9 3026 aa19.15■□□□□ 0.66
SRRM1-222ENST00000596378 NPIPB11E5RHQ5 1161 aa19.14■□□□□ 0.66
SRRM1-222ENST00000596378 WRBO00258 174 aa19.14■□□□□ 0.66
SRRM1-222ENST00000596378 ATP6V0CP27449 155 aa19.14■□□□□ 0.66
SRRM1-222ENST00000596378 FABP6P51161 128 aa19.14■□□□□ 0.66
SRRM1-222ENST00000596378 PAX9P55771 341 aa19.14■□□□□ 0.66
SRRM1-222ENST00000596378 ACSF3Q4G176 576 aaPredicted RBP19.14■□□□□ 0.66
SRRM1-222ENST00000596378 C11orf53Q8IXP5 236 aa19.14■□□□□ 0.66
SRRM1-222ENST00000596378 RNASE11Q8TAA1 199 aaKnown RBP19.14■□□□□ 0.66
SRRM1-222ENST00000596378 ABHD14AQ9BUJ0 271 aa19.14■□□□□ 0.66
SRRM1-222ENST00000596378 MSL2Q9HCI7 577 aa19.14■□□□□ 0.66
SRRM1-222ENST00000596378 UFSP2Q9NUQ7 469 aa19.14■□□□□ 0.66
SRRM1-222ENST00000596378 PRR33A8MZF0 331 aa19.14■□□□□ 0.65
SRRM1-222ENST00000596378 CEACAM6P40199 344 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms