RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 TRGV10A0A0A0MS01 117 aa12.18□□□□□ -0.46
SHKBP1-211ENST00000595945 A0A1B0GVG6 124 aa12.18□□□□□ -0.46
SHKBP1-211ENST00000595945 hADV38S2A0JD32 116 aa12.18□□□□□ -0.46
SHKBP1-211ENST00000595945 OR5H14A6NHG9 310 aa12.18□□□□□ -0.46
SHKBP1-211ENST00000595945 NDUFS8O00217 210 aa12.18□□□□□ -0.46
SHKBP1-211ENST00000595945 F2RL2O00254 374 aa12.18□□□□□ -0.46
SHKBP1-211ENST00000595945 GPR37O15354 613 aa12.18□□□□□ -0.46
SHKBP1-211ENST00000595945 HBZP02008 142 aa12.18□□□□□ -0.46
SHKBP1-211ENST00000595945 SSTR5P35346 364 aa12.18□□□□□ -0.46
SHKBP1-211ENST00000595945 MECP2P51608 486 aaKnown RBP12.18□□□□□ -0.46
SHKBP1-211ENST00000595945 RAG2P55895 527 aa12.18□□□□□ -0.46
SHKBP1-211ENST00000595945 TSPAN5P62079 268 aa12.18□□□□□ -0.46
SHKBP1-211ENST00000595945 C17orf58Q2M2W7 97 aa12.18□□□□□ -0.46
SHKBP1-211ENST00000595945 SCGB2B2Q4G0G5 96 aa12.18□□□□□ -0.46
SHKBP1-211ENST00000595945 AADACL3Q5VUY0 350 aa12.18□□□□□ -0.46
SHKBP1-211ENST00000595945 WDR25Q64LD2 544 aaPredicted RBP12.18□□□□□ -0.46
SHKBP1-211ENST00000595945 H1FOOQ8IZA3 346 aaPredicted RBP12.18□□□□□ -0.46
SHKBP1-211ENST00000595945 GINS4Q9BRT9 223 aa12.18□□□□□ -0.46
SHKBP1-211ENST00000595945 ZNF2Q9BSG1 426 aaPredicted RBP12.18□□□□□ -0.46
SHKBP1-211ENST00000595945 C20orf85Q9H1P6 137 aa12.18□□□□□ -0.46
SHKBP1-211ENST00000595945 BEX4Q9NWD9 120 aaPredicted RBP12.18□□□□□ -0.46
SHKBP1-211ENST00000595945 TAS2R3Q9NYW6 316 aa12.18□□□□□ -0.46
SHKBP1-211ENST00000595945 CALYQ9NYX4 217 aa12.18□□□□□ -0.46
SHKBP1-211ENST00000595945 LPAR3Q9UBY5 353 aa12.18□□□□□ -0.46
SHKBP1-211ENST00000595945 FLVCR2Q9UPI3 526 aa12.18□□□□□ -0.46
SHKBP1-211ENST00000595945 UBE2J1Q9Y385 318 aaPredicted RBP12.18□□□□□ -0.46
SHKBP1-211ENST00000595945 LINC00312Q9Y6C7 94 aa12.18□□□□□ -0.46
SHKBP1-211ENST00000595945 TRBV23-1A0A0A0MS06 115 aa12.17□□□□□ -0.46
SHKBP1-211ENST00000595945 KBTBD11-OT1A0A1B0GTJ5 212 aa12.17□□□□□ -0.46
SHKBP1-211ENST00000595945 ZNF729A6NN14 1252 aaPredicted RBP12.17□□□□□ -0.46
SHKBP1-211ENST00000595945 INMT-MINDY4F8WBC2 141 aa12.17□□□□□ -0.46
SHKBP1-211ENST00000595945 BET1O15155 118 aa12.17□□□□□ -0.46
SHKBP1-211ENST00000595945 HEXAP06865 529 aa12.17□□□□□ -0.46
SHKBP1-211ENST00000595945 H2AFB2P0C5Z0 115 aa12.17□□□□□ -0.46
SHKBP1-211ENST00000595945 FCGR2CP31995 323 aa12.17□□□□□ -0.46
SHKBP1-211ENST00000595945 NPY4RP50391 375 aa12.17□□□□□ -0.46
SHKBP1-211ENST00000595945 HTD2P86397 168 aa12.17□□□□□ -0.46
SHKBP1-211ENST00000595945 NLRC3Q7RTR2 1065 aa12.17□□□□□ -0.46
SHKBP1-211ENST00000595945 ZDHHC22Q8N966 263 aa12.17□□□□□ -0.46
SHKBP1-211ENST00000595945 ZNF565Q8N9K5 539 aa12.17□□□□□ -0.46
SHKBP1-211ENST00000595945 OR6F1Q8NGZ6 308 aa12.17□□□□□ -0.46
SHKBP1-211ENST00000595945 C8orf46Q8TAG6 207 aa12.17□□□□□ -0.46
SHKBP1-211ENST00000595945 UBALD1Q8TB05 177 aa12.17□□□□□ -0.46
SHKBP1-211ENST00000595945 ARL11Q969Q4 196 aa12.17□□□□□ -0.46
SHKBP1-211ENST00000595945 MOB3AQ96BX8 217 aa12.17□□□□□ -0.46
SHKBP1-211ENST00000595945 BPESC1Q9GZL8 116 aa12.17□□□□□ -0.46
SHKBP1-211ENST00000595945 FXYD6Q9H0Q3 95 aa12.17□□□□□ -0.46
SHKBP1-211ENST00000595945 NUDT15Q9NV35 164 aa12.17□□□□□ -0.46
SHKBP1-211ENST00000595945 OR1A1Q9P1Q5 309 aa12.17□□□□□ -0.46
SHKBP1-211ENST00000595945 CLN8Q9UBY8 286 aa12.17□□□□□ -0.46
SHKBP1-211ENST00000595945 GPR132Q9UNW8 380 aa12.17□□□□□ -0.46
SHKBP1-211ENST00000595945 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.17□□□□□ -0.463e-7■■□□□ 13.4
SHKBP1-211ENST00000595945 CCDC168Q8NDH2 2452 aa12.16□□□□□ -0.46
SHKBP1-211ENST00000595945 CREBBPQ92793 2442 aa12.16□□□□□ -0.46
SHKBP1-211ENST00000595945 ARPC1BO15143 372 aaKnown RBP12.16□□□□□ -0.46
SHKBP1-211ENST00000595945 SPINT2O43291 252 aa12.16□□□□□ -0.46
SHKBP1-211ENST00000595945 IGHV2-5P01817 119 aa12.16□□□□□ -0.46
SHKBP1-211ENST00000595945 AADACP22760 399 aa12.16□□□□□ -0.46
SHKBP1-211ENST00000595945 NFYAP23511 347 aaPredicted RBP12.16□□□□□ -0.46
SHKBP1-211ENST00000595945 FPR2P25090 351 aa12.16□□□□□ -0.46
SHKBP1-211ENST00000595945 IL2RGP31785 369 aa12.16□□□□□ -0.46
SHKBP1-211ENST00000595945 DLX6P56179 175 aa12.16□□□□□ -0.46
SHKBP1-211ENST00000595945 LMO4P61968 165 aa12.16□□□□□ -0.46
SHKBP1-211ENST00000595945 RPL31P62899 125 aaKnown RBP12.16□□□□□ -0.46
SHKBP1-211ENST00000595945 ZNF273Q14593 569 aa12.16□□□□□ -0.46
SHKBP1-211ENST00000595945 SURF2Q15527 256 aaPredicted RBP12.16□□□□□ -0.46
SHKBP1-211ENST00000595945 C11orf91Q3C1V1 193 aa12.16□□□□□ -0.46
SHKBP1-211ENST00000595945 TMEM200BQ69YZ2 307 aa12.16□□□□□ -0.46
SHKBP1-211ENST00000595945 LRRC75A-AS1Q8N1F1 130 aa12.16□□□□□ -0.46
SHKBP1-211ENST00000595945 OR10J5Q8NHC4 309 aa12.16□□□□□ -0.46
SHKBP1-211ENST00000595945 FAM168AQ92567 244 aa12.16□□□□□ -0.46
SHKBP1-211ENST00000595945 GALMQ96C23 342 aa12.16□□□□□ -0.46
SHKBP1-211ENST00000595945 MBD6Q96DN6 1003 aa12.16□□□□□ -0.46
SHKBP1-211ENST00000595945 PERPQ96FX8 193 aa12.16□□□□□ -0.46
SHKBP1-211ENST00000595945 TMPRSS13Q9BYE2 586 aa12.16□□□□□ -0.46
SHKBP1-211ENST00000595945 VSIG4Q9Y279 399 aa12.16□□□□□ -0.46
SHKBP1-211ENST00000595945 PRRC2AP48634 2157 aaKnown RBP12.15□□□□□ -0.46
SHKBP1-211ENST00000595945 TRAV6A0A075B6T7 132 aa12.15□□□□□ -0.46
SHKBP1-211ENST00000595945 A0A0B4J293 547 aa12.15□□□□□ -0.46
SHKBP1-211ENST00000595945 MEX3AA1L020 520 aaKnown RBP12.15□□□□□ -0.46
SHKBP1-211ENST00000595945 PPYP01298 95 aa12.15□□□□□ -0.46
SHKBP1-211ENST00000595945 ECI1P42126 302 aa12.15□□□□□ -0.46
SHKBP1-211ENST00000595945 UCP3P55916 312 aa12.15□□□□□ -0.46
SHKBP1-211ENST00000595945 LOXL3P58215 753 aa12.15□□□□□ -0.46
SHKBP1-211ENST00000595945 DSCR9P59020 149 aa12.15□□□□□ -0.46
SHKBP1-211ENST00000595945 CLEC2AQ6UVW9 174 aa12.15□□□□□ -0.46
SHKBP1-211ENST00000595945 LY6G5BQ8NDX9 201 aa12.15□□□□□ -0.46
SHKBP1-211ENST00000595945 OR52L2PQ8NGH6 319 aa12.15□□□□□ -0.46
SHKBP1-211ENST00000595945 CLDND2Q8NHS1 167 aa12.15□□□□□ -0.46
SHKBP1-211ENST00000595945 RFESDQ8TAC1 157 aa12.15□□□□□ -0.46
SHKBP1-211ENST00000595945 MARCH1Q8TCQ1 289 aa12.15□□□□□ -0.46
SHKBP1-211ENST00000595945 IL1F10Q8WWZ1 152 aa12.15□□□□□ -0.46
SHKBP1-211ENST00000595945 H1FXQ92522 213 aaKnown RBP12.15□□□□□ -0.46
SHKBP1-211ENST00000595945 PIMREGQ9BSJ6 248 aa12.15□□□□□ -0.46
SHKBP1-211ENST00000595945 RAB9BQ9NP90 201 aa12.15□□□□□ -0.46
SHKBP1-211ENST00000595945 OR2W1Q9Y3N9 320 aa12.15□□□□□ -0.46
SHKBP1-211ENST00000595945 KIAA1324LA8MWY0 1029 aaPredicted RBP12.14□□□□□ -0.47
SHKBP1-211ENST00000595945 A8MXK9 166 aa12.14□□□□□ -0.47
SHKBP1-211ENST00000595945 PEX14O75381 377 aa12.14□□□□□ -0.47
SHKBP1-211ENST00000595945 VSIG10L2P0DP72 767 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms