RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 TRAPPC2LQ9UL33 140 aa13.44□□□□□ -0.26
CCDC9-202ENST00000595659 PEX16Q9Y5Y5 336 aa13.44□□□□□ -0.26
CCDC9-202ENST00000595659 MCRIP1C9JLW8 97 aa13.43□□□□□ -0.26
CCDC9-202ENST00000595659 ORC5O43913 435 aa13.43□□□□□ -0.26
CCDC9-202ENST00000595659 GPX5O75715 221 aa13.43□□□□□ -0.26
CCDC9-202ENST00000595659 IGHG2P01859 326 aa13.43□□□□□ -0.26
CCDC9-202ENST00000595659 GNAO1P09471 354 aa13.43□□□□□ -0.26
CCDC9-202ENST00000595659 THBS3P49746 956 aa13.43□□□□□ -0.26
CCDC9-202ENST00000595659 MED21Q13503 144 aa13.43□□□□□ -0.26
CCDC9-202ENST00000595659 EBI3Q14213 229 aa13.43□□□□□ -0.26
CCDC9-202ENST00000595659 AWAT2Q6E213 333 aa13.43□□□□□ -0.26
CCDC9-202ENST00000595659 RAB12Q6IQ22 244 aa13.43□□□□□ -0.26
CCDC9-202ENST00000595659 LCNL1Q6ZST4 164 aa13.43□□□□□ -0.26
CCDC9-202ENST00000595659 FOXRED2Q8IWF2 684 aa13.43□□□□□ -0.26
CCDC9-202ENST00000595659 STPG2Q8N412 459 aa13.43□□□□□ -0.26
CCDC9-202ENST00000595659 DHRSXQ8N5I4 330 aa13.43□□□□□ -0.26
CCDC9-202ENST00000595659 LINC00311Q8N616 119 aa13.43□□□□□ -0.26
CCDC9-202ENST00000595659 TMEM104Q8NE00 496 aa13.43□□□□□ -0.26
CCDC9-202ENST00000595659 SETD9Q8NE22 299 aa13.43□□□□□ -0.26
CCDC9-202ENST00000595659 KLHL30-AS1Q8NEE0 82 aa13.43□□□□□ -0.26
CCDC9-202ENST00000595659 OR52M1Q8NGK5 317 aa13.43□□□□□ -0.26
CCDC9-202ENST00000595659 OR1L1Q8NH94 360 aa13.43□□□□□ -0.26
CCDC9-202ENST00000595659 RTN4IP1Q8WWV3 396 aaPredicted RBP13.43□□□□□ -0.26
CCDC9-202ENST00000595659 GNG12Q9UBI6 72 aa13.43□□□□□ -0.26
CCDC9-202ENST00000595659 IL3RAP26951 378 aa13.42□□□□□ -0.26
CCDC9-202ENST00000595659 ZNF134P52741 427 aa13.42□□□□□ -0.26
CCDC9-202ENST00000595659 SLC35B1P78383 322 aa13.42□□□□□ -0.26
CCDC9-202ENST00000595659 GPR176Q14439 515 aa13.42□□□□□ -0.26
CCDC9-202ENST00000595659 LAIR2Q6ISS4 152 aa13.42□□□□□ -0.26
CCDC9-202ENST00000595659 Q8N6K4 173 aa13.42□□□□□ -0.26
CCDC9-202ENST00000595659 Q8N9W7 124 aa13.42□□□□□ -0.26
CCDC9-202ENST00000595659 OR51D1Q8NGF3 324 aa13.42□□□□□ -0.26
CCDC9-202ENST00000595659 OR2T10Q8NGZ9 312 aa13.42□□□□□ -0.26
CCDC9-202ENST00000595659 ST6GALNAC6Q969X2 333 aa13.42□□□□□ -0.26
CCDC9-202ENST00000595659 SELENOIQ9C0D9 397 aa13.42□□□□□ -0.26
CCDC9-202ENST00000595659 PLSCR3Q9NRY6 295 aa13.42□□□□□ -0.26
CCDC9-202ENST00000595659 RCC2Q9P258 522 aaKnown RBP13.42□□□□□ -0.26
CCDC9-202ENST00000595659 UBE2QL1A1L167 161 aa13.41□□□□□ -0.26
CCDC9-202ENST00000595659 SPINT2O43291 252 aa13.41□□□□□ -0.26
CCDC9-202ENST00000595659 CRTAPO75718 401 aaPredicted RBP13.41□□□□□ -0.26
CCDC9-202ENST00000595659 DUS4LO95620 317 aaKnown RBP13.41□□□□□ -0.26
CCDC9-202ENST00000595659 HBZP02008 142 aa13.41□□□□□ -0.26
CCDC9-202ENST00000595659 RCC1P18754 421 aaPredicted RBP13.41□□□□□ -0.26
CCDC9-202ENST00000595659 CELP19835 753 aa13.41□□□□□ -0.26
CCDC9-202ENST00000595659 FSTP19883 344 aa13.41□□□□□ -0.26
CCDC9-202ENST00000595659 GPR12P47775 334 aa13.41□□□□□ -0.26
CCDC9-202ENST00000595659 CT45A1Q5HYN5 189 aa13.41□□□□□ -0.26
CCDC9-202ENST00000595659 AHSA2Q719I0 299 aa13.41□□□□□ -0.26
CCDC9-202ENST00000595659 IZUMO1Q8IYV9 350 aa13.41□□□□□ -0.26
CCDC9-202ENST00000595659 CT45A3Q8NHU0 189 aa13.41□□□□□ -0.26
CCDC9-202ENST00000595659 FAM46BQ96A09 425 aa13.41□□□□□ -0.26
CCDC9-202ENST00000595659 DERL3Q96Q80 235 aa13.41□□□□□ -0.26
CCDC9-202ENST00000595659 ABCG5Q9H222 651 aa13.41□□□□□ -0.26
CCDC9-202ENST00000595659 SPACA1Q9HBV2 294 aa13.41□□□□□ -0.26
CCDC9-202ENST00000595659 ZFP57Q9NU63 452 aa13.41□□□□□ -0.26
CCDC9-202ENST00000595659 MOSP00540 346 aa13.4□□□□□ -0.26
CCDC9-202ENST00000595659 RPLP1P05386 114 aaKnown RBP13.4□□□□□ -0.26
CCDC9-202ENST00000595659 MGMTP16455 207 aa13.4□□□□□ -0.26
CCDC9-202ENST00000595659 CAPGP40121 348 aa13.4□□□□□ -0.26
CCDC9-202ENST00000595659 F2RL1P55085 397 aa13.4□□□□□ -0.26
CCDC9-202ENST00000595659 RAB25P57735 213 aa13.4□□□□□ -0.26
CCDC9-202ENST00000595659 RCN1Q15293 331 aa13.4□□□□□ -0.26
CCDC9-202ENST00000595659 TGIF2LXQ8IUE1 241 aa13.4□□□□□ -0.26
CCDC9-202ENST00000595659 C8orf31Q8N9H6 132 aa13.4□□□□□ -0.26
CCDC9-202ENST00000595659 ZNF439Q8NDP4 499 aa13.4□□□□□ -0.26
CCDC9-202ENST00000595659 BPIFB6Q8NFQ5 453 aa13.4□□□□□ -0.26
CCDC9-202ENST00000595659 TFAP2CQ92754 450 aa13.4□□□□□ -0.26
CCDC9-202ENST00000595659 S1PR3Q99500 378 aa13.4□□□□□ -0.26
CCDC9-202ENST00000595659 EFCAB10A6NFE3 127 aa13.39□□□□□ -0.27
CCDC9-202ENST00000595659 AP4M1O00189 453 aa13.39□□□□□ -0.27
CCDC9-202ENST00000595659 MYL12BO14950 172 aa13.39□□□□□ -0.27
CCDC9-202ENST00000595659 CD1BP29016 333 aa13.39□□□□□ -0.27
CCDC9-202ENST00000595659 MYCNOSP40205 109 aa13.39□□□□□ -0.27
CCDC9-202ENST00000595659 EGFEM1PQ0D2K5 195 aa13.39□□□□□ -0.27
CCDC9-202ENST00000595659 INSL4Q14641 139 aa13.39□□□□□ -0.27
CCDC9-202ENST00000595659 GNMTQ14749 295 aa13.39□□□□□ -0.27
CCDC9-202ENST00000595659 C6orf183Q5T699 404 aa13.39□□□□□ -0.27
CCDC9-202ENST00000595659 SIGIRRQ6IA17 410 aa13.39□□□□□ -0.27
CCDC9-202ENST00000595659 C11orf87Q6NUJ2 197 aa13.39□□□□□ -0.27
CCDC9-202ENST00000595659 SLC25A48Q6ZT89 311 aaKnown RBP13.39□□□□□ -0.27
CCDC9-202ENST00000595659 ZNF695Q8IW36 515 aa13.39□□□□□ -0.27
CCDC9-202ENST00000595659 C8orf59Q8N0T1 100 aaPredicted RBP13.39□□□□□ -0.27
CCDC9-202ENST00000595659 PACRGLQ8N7B6 248 aa13.39□□□□□ -0.27
CCDC9-202ENST00000595659 OR52L2PQ8NGH6 319 aa13.39□□□□□ -0.27
CCDC9-202ENST00000595659 MRPS24Q96EL2 167 aaKnown RBP13.39□□□□□ -0.27
CCDC9-202ENST00000595659 P2RX4Q99571 388 aa13.39□□□□□ -0.27
CCDC9-202ENST00000595659 RASL11BQ9BPW5 248 aa13.39□□□□□ -0.27
CCDC9-202ENST00000595659 HSPB9Q9BQS6 159 aa13.39□□□□□ -0.27
CCDC9-202ENST00000595659 TAF9BQ9HBM6 251 aa13.39□□□□□ -0.27
CCDC9-202ENST00000595659 LIN7CQ9NUP9 197 aaKnown RBP13.39□□□□□ -0.27
CCDC9-202ENST00000595659 PSORS1C1Q9UIG5 152 aa13.39□□□□□ -0.27
CCDC9-202ENST00000595659 FUT3P21217 361 aa13.38□□□□□ -0.27
CCDC9-202ENST00000595659 TAS2R43P59537 309 aa13.38□□□□□ -0.27
CCDC9-202ENST00000595659 PNLIPRP3Q17RR3 467 aa13.38□□□□□ -0.27
CCDC9-202ENST00000595659 DEFB136Q30KP8 78 aa13.38□□□□□ -0.27
CCDC9-202ENST00000595659 NKAPLQ5M9Q1 402 aa13.38□□□□□ -0.27
CCDC9-202ENST00000595659 TEX38Q6PEX7 206 aa13.38□□□□□ -0.27
CCDC9-202ENST00000595659 LYPD6Q86Y78 171 aa13.38□□□□□ -0.27
CCDC9-202ENST00000595659 COMMD1Q8N668 190 aa13.38□□□□□ -0.27
CCDC9-202ENST00000595659 DPF1Q92782 380 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms