RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 LRRC3CA6NJW4 275 aa11.3□□□□□ -0.6
VRK3-209ENST00000594948 SYNGR2O43760 224 aa11.3□□□□□ -0.6
VRK3-209ENST00000594948 SERPINE2P07093 398 aa11.3□□□□□ -0.6
VRK3-209ENST00000594948 GPX4P36969 197 aaPredicted RBP11.3□□□□□ -0.6
VRK3-209ENST00000594948 FOLR3P41439 243 aa11.3□□□□□ -0.6
VRK3-209ENST00000594948 HBG1P69891 147 aa11.3□□□□□ -0.6
VRK3-209ENST00000594948 HBG2P69892 147 aa11.3□□□□□ -0.6
VRK3-209ENST00000594948 LRRC75BQ2VPJ9 315 aa11.3□□□□□ -0.6
VRK3-209ENST00000594948 ZNF468Q5VIY5 522 aaPredicted RBP11.3□□□□□ -0.6
VRK3-209ENST00000594948 CDCP2Q5VXM1 449 aa11.3□□□□□ -0.6
VRK3-209ENST00000594948 OR5R1Q8NH85 324 aa11.3□□□□□ -0.6
VRK3-209ENST00000594948 NEK7Q8TDX7 302 aa11.3□□□□□ -0.6
VRK3-209ENST00000594948 ABHD5Q8WTS1 349 aa11.3□□□□□ -0.6
VRK3-209ENST00000594948 FRZBQ92765 325 aa11.3□□□□□ -0.6
VRK3-209ENST00000594948 CLDN23Q96B33 292 aa11.3□□□□□ -0.6
VRK3-209ENST00000594948 WNT16Q9UBV4 365 aa11.3□□□□□ -0.6
VRK3-209ENST00000594948 TIMM9Q9Y5J7 89 aa11.3□□□□□ -0.6
VRK3-209ENST00000594948 ZFP36L1Q07352 338 aaKnown RBP11.29□□□□□ -0.6
VRK3-209ENST00000594948 TMEM41BQ5BJD5 291 aa11.29□□□□□ -0.6
VRK3-209ENST00000594948 LYSMD4Q5XG99 296 aa11.29□□□□□ -0.6
VRK3-209ENST00000594948 MOB1BQ7L9L4 216 aa11.29□□□□□ -0.6
VRK3-209ENST00000594948 P4HA3Q7Z4N8 544 aa11.29□□□□□ -0.6
VRK3-209ENST00000594948 OR10J5Q8NHC4 309 aa11.29□□□□□ -0.6
VRK3-209ENST00000594948 PYGO2Q9BRQ0 406 aa11.29□□□□□ -0.6
VRK3-209ENST00000594948 GPR61Q9BZJ8 451 aa11.29□□□□□ -0.6
VRK3-209ENST00000594948 PITPNC1Q9UKF7 332 aa11.29□□□□□ -0.6
VRK3-209ENST00000594948 KMT2EQ8IZD2 1858 aa11.29□□□□□ -0.6
VRK3-209ENST00000594948 A0A0G2JMM0 328 aa11.28□□□□□ -0.6
VRK3-209ENST00000594948 A0A1W2PPB8 328 aa11.28□□□□□ -0.6
VRK3-209ENST00000594948 A0A1W2PRS3 328 aa11.28□□□□□ -0.6
VRK3-209ENST00000594948 OR5B21A6NL26 309 aa11.28□□□□□ -0.6
VRK3-209ENST00000594948 KIR3DP1A8MWS1 328 aa11.28□□□□□ -0.6
VRK3-209ENST00000594948 FAM90A26D6RGX4 464 aa11.28□□□□□ -0.6
VRK3-209ENST00000594948 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.28□□□□□ -0.6
VRK3-209ENST00000594948 APLNRP35414 380 aa11.28□□□□□ -0.6
VRK3-209ENST00000594948 MDH2P40926 338 aaKnown RBP11.28□□□□□ -0.6
VRK3-209ENST00000594948 CXCL12P48061 93 aa11.28□□□□□ -0.6
VRK3-209ENST00000594948 GPM6AP51674 278 aa11.28□□□□□ -0.6
VRK3-209ENST00000594948 SSTP61278 116 aa11.28□□□□□ -0.6
VRK3-209ENST00000594948 PKIAP61925 76 aa11.28□□□□□ -0.6
VRK3-209ENST00000594948 TMEM267Q0VDI3 215 aaPredicted RBP11.28□□□□□ -0.6
VRK3-209ENST00000594948 ZNF726P1Q15940 193 aa11.28□□□□□ -0.6
VRK3-209ENST00000594948 C9orf152Q5JTZ5 239 aa11.28□□□□□ -0.6
VRK3-209ENST00000594948 DBX2Q6ZNG2 339 aa11.28□□□□□ -0.6
VRK3-209ENST00000594948 CENPVQ7Z7K6 275 aaPredicted RBP11.28□□□□□ -0.6
VRK3-209ENST00000594948 OR10V1Q8NGI7 309 aa11.28□□□□□ -0.6
VRK3-209ENST00000594948 IFI44Q8TCB0 444 aa11.28□□□□□ -0.6
VRK3-209ENST00000594948 PSMF1Q92530 271 aa11.28□□□□□ -0.6
VRK3-209ENST00000594948 HIST1H2AAQ96QV6 131 aa11.28□□□□□ -0.6
VRK3-209ENST00000594948 ZNF665Q9H7R5 613 aa11.28□□□□□ -0.6
VRK3-209ENST00000594948 PSENENQ9NZ42 101 aa11.28□□□□□ -0.6
VRK3-209ENST00000594948 OR14J1Q9UGF5 321 aa11.28□□□□□ -0.6
VRK3-209ENST00000594948 ZFP92A6NM28 416 aa11.28□□□□□ -0.6
VRK3-209ENST00000594948 CD300LBA8K4G0 201 aa11.28□□□□□ -0.6
VRK3-209ENST00000594948 PSG2P11465 335 aa11.28□□□□□ -0.6
VRK3-209ENST00000594948 GFRA1P56159 465 aa11.28□□□□□ -0.6
VRK3-209ENST00000594948 ARF1P84077 181 aaKnown RBP11.28□□□□□ -0.6
VRK3-209ENST00000594948 TCEAL6Q6IPX3 200 aa11.28□□□□□ -0.6
VRK3-209ENST00000594948 C5orf24Q7Z6I8 188 aa11.28□□□□□ -0.6
VRK3-209ENST00000594948 TGIF2LYQ8IUE0 185 aa11.28□□□□□ -0.6
VRK3-209ENST00000594948 BATF2Q8N1L9 274 aa11.28□□□□□ -0.6
VRK3-209ENST00000594948 ZNF845Q96IR2 970 aaPredicted RBP11.28□□□□□ -0.6
VRK3-209ENST00000594948 HS3ST6Q96QI5 342 aa11.28□□□□□ -0.6
VRK3-209ENST00000594948 GPHA2Q96T91 129 aa11.28□□□□□ -0.6
VRK3-209ENST00000594948 RSG1Q9BU20 258 aa11.28□□□□□ -0.6
VRK3-209ENST00000594948 PKIBQ9C010 78 aa11.28□□□□□ -0.6
VRK3-209ENST00000594948 SRD5A3Q9H8P0 318 aa11.28□□□□□ -0.6
VRK3-209ENST00000594948 LRFN1Q9P244 771 aa11.28□□□□□ -0.6
VRK3-209ENST00000594948 NAT8Q9UHE5 227 aa11.28□□□□□ -0.6
VRK3-209ENST00000594948 MPC1Q9Y5U8 109 aa11.28□□□□□ -0.6
VRK3-209ENST00000594948 NTN3O00634 580 aaPredicted RBP11.27□□□□□ -0.61
VRK3-209ENST00000594948 TNFSF12O43508 249 aa11.27□□□□□ -0.61
VRK3-209ENST00000594948 MRPL33O75394 65 aaKnown RBP11.27□□□□□ -0.61
VRK3-209ENST00000594948 WIPI1Q5MNZ9 446 aaPredicted RBP11.27□□□□□ -0.61
VRK3-209ENST00000594948 WDR25Q64LD2 544 aaPredicted RBP11.27□□□□□ -0.61
VRK3-209ENST00000594948 CYP2G1PQ6ZSU1 146 aa11.27□□□□□ -0.61
VRK3-209ENST00000594948 REC114Q7Z4M0 266 aa11.27□□□□□ -0.61
VRK3-209ENST00000594948 ZNF573Q86YE8 665 aa11.27□□□□□ -0.61
VRK3-209ENST00000594948 RNASE11Q8TAA1 199 aaKnown RBP11.27□□□□□ -0.61
VRK3-209ENST00000594948 RNASEH2CQ8TDP1 164 aaKnown RBP11.27□□□□□ -0.61
VRK3-209ENST00000594948 OR5P3Q8WZ94 311 aa11.27□□□□□ -0.61
VRK3-209ENST00000594948 WDR61Q9GZS3 305 aaKnown RBP11.27□□□□□ -0.61
VRK3-209ENST00000594948 LIN7CQ9NUP9 197 aaKnown RBP11.27□□□□□ -0.61
VRK3-209ENST00000594948 UFSP2Q9NUQ7 469 aa11.27□□□□□ -0.61
VRK3-209ENST00000594948 CACNG5Q9UF02 275 aa11.27□□□□□ -0.61
VRK3-209ENST00000594948 H3BP45 60 aa11.26□□□□□ -0.61
VRK3-209ENST00000594948 DVL1O14640 695 aa11.26□□□□□ -0.61
VRK3-209ENST00000594948 NXPH3O95157 252 aa11.26□□□□□ -0.61
VRK3-209ENST00000594948 IGKV1-39P01597 117 aa11.26□□□□□ -0.61
VRK3-209ENST00000594948 IGKV1D-39P04432 117 aa11.26□□□□□ -0.61
VRK3-209ENST00000594948 RFPL3SP0C7P2 107 aa11.26□□□□□ -0.61
VRK3-209ENST00000594948 PAX1P15863 534 aa11.26□□□□□ -0.61
VRK3-209ENST00000594948 COA6Q5JTJ3 125 aaKnown RBP11.26□□□□□ -0.61
VRK3-209ENST00000594948 GFI1BQ5VTD9 330 aa11.26□□□□□ -0.61
VRK3-209ENST00000594948 CDPF1Q6NVV7 123 aa11.26□□□□□ -0.61
VRK3-209ENST00000594948 Q6ZRM9 215 aa11.26□□□□□ -0.61
VRK3-209ENST00000594948 HAPLN4Q86UW8 402 aa11.26□□□□□ -0.61
VRK3-209ENST00000594948 OR10A7Q8NGE5 316 aa11.26□□□□□ -0.61
VRK3-209ENST00000594948 ABHD3Q8WU67 409 aa11.26□□□□□ -0.61
VRK3-209ENST00000594948 PRDM6Q9NQX0 595 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms