RNA–Protein interactions for RNA: ENST00000594724.5

USE1-205, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-205ENST00000594724 BLOC1S6Q9UL45 172 aa11.8□□□□□ -0.52
USE1-205ENST00000594724 AK6Q9Y3D8 172 aaKnown RBP11.8□□□□□ -0.52
USE1-205ENST00000594724 SH2D7A6NKC9 451 aaPredicted RBP11.79□□□□□ -0.52
USE1-205ENST00000594724 FAM90A9PA6NNJ1 464 aa11.79□□□□□ -0.52
USE1-205ENST00000594724 SLC22A1O15245 554 aa11.79□□□□□ -0.52
USE1-205ENST00000594724 GLAP06280 429 aa11.79□□□□□ -0.52
USE1-205ENST00000594724 RPS27AP62979 156 aaKnown RBP11.79□□□□□ -0.52
USE1-205ENST00000594724 UNC119Q13432 240 aa11.79□□□□□ -0.52
USE1-205ENST00000594724 P2RY14Q15391 338 aa11.79□□□□□ -0.52
USE1-205ENST00000594724 TRAM1Q15629 374 aa11.79□□□□□ -0.52
USE1-205ENST00000594724 TBCEQ15813 527 aaPredicted RBP11.79□□□□□ -0.52
USE1-205ENST00000594724 GAPTQ8N292 157 aa11.79□□□□□ -0.52
USE1-205ENST00000594724 OR56B4Q8NH76 319 aa11.79□□□□□ -0.52
USE1-205ENST00000594724 OR1L1Q8NH94 360 aa11.79□□□□□ -0.52
USE1-205ENST00000594724 KCNG3Q8TAE7 436 aa11.79□□□□□ -0.52
USE1-205ENST00000594724 FAM110DQ8TAY7 271 aaPredicted RBP11.79□□□□□ -0.52
USE1-205ENST00000594724 CFHR4Q92496 578 aa11.79□□□□□ -0.52
USE1-205ENST00000594724 RBM14Q96PK6 669 aaKnown RBP11.79□□□□□ -0.52
USE1-205ENST00000594724 NICN1Q9BSH3 213 aa11.79□□□□□ -0.52
USE1-205ENST00000594724 TMEM59Q9BXS4 323 aa11.79□□□□□ -0.52
USE1-205ENST00000594724 MMP27Q9H306 513 aa11.79□□□□□ -0.52
USE1-205ENST00000594724 LIN7BQ9HAP6 207 aa11.79□□□□□ -0.52
USE1-205ENST00000594724 ACOT13Q9NPJ3 140 aa11.79□□□□□ -0.52
USE1-205ENST00000594724 GFOD1Q9NXC2 390 aa11.79□□□□□ -0.52
USE1-205ENST00000594724 A0A1W2PPI3 338 aa11.78□□□□□ -0.52
USE1-205ENST00000594724 TMEM14DPA8MWL7 114 aa11.78□□□□□ -0.52
USE1-205ENST00000594724 SLC31A2O15432 143 aa11.78□□□□□ -0.52
USE1-205ENST00000594724 SPINT2O43291 252 aa11.78□□□□□ -0.52
USE1-205ENST00000594724 ARL6IP5O75915 188 aa11.78□□□□□ -0.52
USE1-205ENST00000594724 OR2F2O95006 317 aa11.78□□□□□ -0.52
USE1-205ENST00000594724 HBZP02008 142 aa11.78□□□□□ -0.52
USE1-205ENST00000594724 SNRNP70P08621 437 aaKnown RBP11.78□□□□□ -0.52
USE1-205ENST00000594724 CD28P10747 220 aa11.78□□□□□ -0.52
USE1-205ENST00000594724 PSMA1P25786 263 aaKnown RBP11.78□□□□□ -0.52
USE1-205ENST00000594724 CALRP27797 417 aaKnown RBP11.78□□□□□ -0.52
USE1-205ENST00000594724 CHATP28329 748 aa11.78□□□□□ -0.52
USE1-205ENST00000594724 VDAC2P45880 294 aaPredicted RBP11.78□□□□□ -0.52
USE1-205ENST00000594724 REG1BP48304 166 aa11.78□□□□□ -0.52
USE1-205ENST00000594724 QRFPP83859 136 aa11.78□□□□□ -0.52
USE1-205ENST00000594724 EMX1Q04741 257 aaPredicted RBP11.78□□□□□ -0.52
USE1-205ENST00000594724 HNF4GQ14541 408 aa11.78□□□□□ -0.52
USE1-205ENST00000594724 SSX1Q16384 188 aa11.78□□□□□ -0.52
USE1-205ENST00000594724 ABCA11PQ4W5N1 156 aa11.78□□□□□ -0.52
USE1-205ENST00000594724 C6orf183Q5T699 404 aa11.78□□□□□ -0.52
USE1-205ENST00000594724 ZNF367Q7RTV3 350 aa11.78□□□□□ -0.52
USE1-205ENST00000594724 C16orf82Q7Z2V1 217 aa11.78□□□□□ -0.52
USE1-205ENST00000594724 C6orf201Q7Z4U5 140 aa11.78□□□□□ -0.52
USE1-205ENST00000594724 LYG1Q8N1E2 194 aa11.78□□□□□ -0.52
USE1-205ENST00000594724 DRAM1Q8N682 238 aa11.78□□□□□ -0.52
USE1-205ENST00000594724 OR10V1Q8NGI7 309 aa11.78□□□□□ -0.52
USE1-205ENST00000594724 OR6M1Q8NGM8 313 aa11.78□□□□□ -0.52
USE1-205ENST00000594724 MRPL30Q8TCC3 161 aaKnown RBP11.78□□□□□ -0.52
USE1-205ENST00000594724 AKR1E2Q96JD6 320 aa11.78□□□□□ -0.52
USE1-205ENST00000594724 NEDD4LQ96PU5 975 aa11.78□□□□□ -0.52
USE1-205ENST00000594724 SULT4A1Q9BR01 284 aa11.78□□□□□ -0.52
USE1-205ENST00000594724 OCSTAMPQ9BR26 566 aa11.78□□□□□ -0.52
USE1-205ENST00000594724 FAAP24Q9BTP7 215 aa11.78□□□□□ -0.52
USE1-205ENST00000594724 PLGRKTQ9HBL7 147 aa11.78□□□□□ -0.52
USE1-205ENST00000594724 TAF9BQ9HBM6 251 aa11.78□□□□□ -0.52
USE1-205ENST00000594724 MGAM2Q2M2H8 2515 aa11.77□□□□□ -0.53
USE1-205ENST00000594724 A0A0A6YYD4 124 aa11.77□□□□□ -0.53
USE1-205ENST00000594724 SLC17A2O00624 439 aa11.77□□□□□ -0.53
USE1-205ENST00000594724 PEX14O75381 377 aa11.77□□□□□ -0.53
USE1-205ENST00000594724 CA11O75493 328 aa11.77□□□□□ -0.53
USE1-205ENST00000594724 BPNT1O95861 308 aa11.77□□□□□ -0.53
USE1-205ENST00000594724 AMY1AP04745 511 aa11.77□□□□□ -0.53
USE1-205ENST00000594724 AMY2AP04746 511 aa11.77□□□□□ -0.53
USE1-205ENST00000594724 CSF1P09603 554 aa11.77□□□□□ -0.53
USE1-205ENST00000594724 FAM106CPP0CH98 169 aa11.77□□□□□ -0.53
USE1-205ENST00000594724 RAB7AP51149 207 aa11.77□□□□□ -0.53
USE1-205ENST00000594724 HES1Q14469 280 aa11.77□□□□□ -0.53
USE1-205ENST00000594724 C2orf68Q2NKX9 166 aa11.77□□□□□ -0.53
USE1-205ENST00000594724 MOB3BQ86TA1 216 aa11.77□□□□□ -0.53
USE1-205ENST00000594724 THNSL2Q86YJ6 484 aa11.77□□□□□ -0.53
USE1-205ENST00000594724 LINC00311Q8N616 119 aa11.77□□□□□ -0.53
USE1-205ENST00000594724 WNT10AQ9GZT5 417 aa11.77□□□□□ -0.53
USE1-205ENST00000594724 GNG12Q9UBI6 72 aa11.77□□□□□ -0.53
USE1-205ENST00000594724 IGHV3-72A0A0B4J1Y9 119 aa11.76□□□□□ -0.53
USE1-205ENST00000594724 IGHV1-3A0A0C4DH29 117 aa11.76□□□□□ -0.53
USE1-205ENST00000594724 CCRL2O00421 344 aa11.76□□□□□ -0.53
USE1-205ENST00000594724 HSD17B6O14756 317 aa11.76□□□□□ -0.53
USE1-205ENST00000594724 DENRO43583 198 aaKnown RBP11.76□□□□□ -0.53
USE1-205ENST00000594724 FBXO24O75426 580 aa11.76□□□□□ -0.53
USE1-205ENST00000594724 GAPDHP04406 335 aaKnown RBP11.76□□□□□ -0.53
USE1-205ENST00000594724 LPLP06858 475 aa11.76□□□□□ -0.53
USE1-205ENST00000594724 ARSBP15848 533 aa11.76□□□□□ -0.53
USE1-205ENST00000594724 BLVRBP30043 206 aaPredicted RBP11.76□□□□□ -0.53
USE1-205ENST00000594724 ZNF134P52741 427 aa11.76□□□□□ -0.53
USE1-205ENST00000594724 CLDN12P56749 244 aa11.76□□□□□ -0.53
USE1-205ENST00000594724 ZNF816Q0VGE8 651 aaPredicted RBP11.76□□□□□ -0.53
USE1-205ENST00000594724 C9orf152Q5JTZ5 239 aa11.76□□□□□ -0.53
USE1-205ENST00000594724 TRAT1Q6PIZ9 186 aa11.76□□□□□ -0.53
USE1-205ENST00000594724 OR8H3Q8N146 312 aa11.76□□□□□ -0.53
USE1-205ENST00000594724 ZNF439Q8NDP4 499 aa11.76□□□□□ -0.53
USE1-205ENST00000594724 OR51D1Q8NGF3 324 aa11.76□□□□□ -0.53
USE1-205ENST00000594724 WIPF2Q8TF74 440 aaPredicted RBP11.76□□□□□ -0.53
USE1-205ENST00000594724 TM2D1Q9BX74 207 aa11.76□□□□□ -0.53
USE1-205ENST00000594724 LPAR5Q9H1C0 372 aa11.76□□□□□ -0.53
USE1-205ENST00000594724 MBNL3Q9NUK0 354 aaKnown RBP11.76□□□□□ -0.53
USE1-205ENST00000594724 KCNIP1Q9NZI2 227 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms