RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 H0YHG0 523 aa11.63□□□□□ -0.55
PNKP-202ENST00000593706 GEMIN2O14893 280 aaKnown RBP11.63□□□□□ -0.55
PNKP-202ENST00000593706 SC5DO75845 299 aa11.63□□□□□ -0.55
PNKP-202ENST00000593706 HTR3BO95264 441 aa11.63□□□□□ -0.55
PNKP-202ENST00000593706 IGKV1D-33P01593 117 aa11.63□□□□□ -0.55
PNKP-202ENST00000593706 IGKV1-33P01594 117 aa11.63□□□□□ -0.55
PNKP-202ENST00000593706 FAM90A15PP0C7V4 464 aa11.63□□□□□ -0.55
PNKP-202ENST00000593706 FAM90A13PP0C7W8 464 aa11.63□□□□□ -0.55
PNKP-202ENST00000593706 FAM90A14PP0C7W9 464 aa11.63□□□□□ -0.55
PNKP-202ENST00000593706 FAM90A24PP0C7X0 464 aa11.63□□□□□ -0.55
PNKP-202ENST00000593706 KCNJ3P48549 501 aa11.63□□□□□ -0.55
PNKP-202ENST00000593706 INSL4Q14641 139 aa11.63□□□□□ -0.55
PNKP-202ENST00000593706 LINC00596Q86U02 117 aa11.63□□□□□ -0.55
PNKP-202ENST00000593706 ZNF695Q8IW36 515 aa11.63□□□□□ -0.55
PNKP-202ENST00000593706 CDH26Q8IXH8 852 aa11.63□□□□□ -0.55
PNKP-202ENST00000593706 OR8H3Q8N146 312 aa11.63□□□□□ -0.55
PNKP-202ENST00000593706 SUMF2Q8NBJ7 301 aa11.63□□□□□ -0.55
PNKP-202ENST00000593706 DUX3Q96PT4 197 aa11.63□□□□□ -0.55
PNKP-202ENST00000593706 DPCDQ9BVM2 203 aaPredicted RBP11.63□□□□□ -0.55
PNKP-202ENST00000593706 MND1Q9BWT6 205 aa11.63□□□□□ -0.55
PNKP-202ENST00000593706 METTL9Q9H1A3 318 aa11.63□□□□□ -0.55
PNKP-202ENST00000593706 IDI2-AS1Q9NZ38 188 aa11.63□□□□□ -0.55
PNKP-202ENST00000593706 RCC2Q9P258 522 aaKnown RBP11.63□□□□□ -0.55
PNKP-202ENST00000593706 PSG11Q9UQ72 335 aa11.63□□□□□ -0.55
PNKP-202ENST00000593706 ERGIC3Q9Y282 383 aa11.63□□□□□ -0.55
PNKP-202ENST00000593706 NPIPB11E5RHQ5 1161 aa11.62□□□□□ -0.55
PNKP-202ENST00000593706 IL1AP01583 271 aa11.62□□□□□ -0.55
PNKP-202ENST00000593706 SERPINA2P20848 420 aa11.62□□□□□ -0.55
PNKP-202ENST00000593706 DIAPH2-AS1Q14236 149 aa11.62□□□□□ -0.55
PNKP-202ENST00000593706 STPG2Q8N412 459 aa11.62□□□□□ -0.55
PNKP-202ENST00000593706 MRGPRDQ8TDS7 321 aa11.62□□□□□ -0.55
PNKP-202ENST00000593706 MUL1Q969V5 352 aa11.62□□□□□ -0.55
PNKP-202ENST00000593706 P2RX4Q99571 388 aa11.62□□□□□ -0.55
PNKP-202ENST00000593706 BARHL1Q9BZE3 327 aa11.62□□□□□ -0.55
PNKP-202ENST00000593706 ING4Q9UNL4 249 aa11.62□□□□□ -0.55
PNKP-202ENST00000593706 U3KQK5 164 aa11.62□□□□□ -0.55
PNKP-202ENST00000593706 PTGES3LE9PB15 166 aa11.61□□□□□ -0.55
PNKP-202ENST00000593706 CCL24O00175 119 aa11.61□□□□□ -0.55
PNKP-202ENST00000593706 HSD17B6O14756 317 aa11.61□□□□□ -0.55
PNKP-202ENST00000593706 RAMP3O60896 148 aa11.61□□□□□ -0.55
PNKP-202ENST00000593706 ZNF780AO75290 641 aaPredicted RBP11.61□□□□□ -0.55
PNKP-202ENST00000593706 IGHG2P01859 326 aa11.61□□□□□ -0.55
PNKP-202ENST00000593706 SSTR5P35346 364 aa11.61□□□□□ -0.55
PNKP-202ENST00000593706 SPHARQ15513 63 aa11.61□□□□□ -0.55
PNKP-202ENST00000593706 MPV17LQ2QL34 196 aa11.61□□□□□ -0.55
PNKP-202ENST00000593706 SLC22A6Q4U2R8 563 aa11.61□□□□□ -0.55
PNKP-202ENST00000593706 FAM27D1Q5T7N8 215 aa11.61□□□□□ -0.55
PNKP-202ENST00000593706 RFESDQ8TAC1 157 aa11.61□□□□□ -0.55
PNKP-202ENST00000593706 THRSPQ92748 146 aa11.61□□□□□ -0.55
PNKP-202ENST00000593706 RAX2Q96IS3 184 aa11.61□□□□□ -0.55
PNKP-202ENST00000593706 MRPS28Q9Y2Q9 187 aaKnown RBP11.61□□□□□ -0.55
PNKP-202ENST00000593706 DNAH7Q8WXX0 4024 aa11.61□□□□□ -0.55
PNKP-202ENST00000593706 A0A1W2PPE3 182 aa11.6□□□□□ -0.55
PNKP-202ENST00000593706 NCBP2LA6PVI3 153 aaKnown RBP11.6□□□□□ -0.55
PNKP-202ENST00000593706 AP4M1O00189 453 aa11.6□□□□□ -0.55
PNKP-202ENST00000593706 OR7C1O76099 320 aaPredicted RBP11.6□□□□□ -0.55
PNKP-202ENST00000593706 CSTBP04080 98 aaKnown RBP11.6□□□□□ -0.55
PNKP-202ENST00000593706 MAS1P04201 325 aa11.6□□□□□ -0.55
PNKP-202ENST00000593706 NHLRC4P0CG21 123 aaPredicted RBP11.6□□□□□ -0.55
PNKP-202ENST00000593706 CD37P11049 281 aa11.6□□□□□ -0.55
PNKP-202ENST00000593706 GTF2F2P13984 249 aa11.6□□□□□ -0.55
PNKP-202ENST00000593706 CRHBPP24387 322 aa11.6□□□□□ -0.55
PNKP-202ENST00000593706 MAPK3P27361 379 aaPredicted RBP11.6□□□□□ -0.55
PNKP-202ENST00000593706 REG1BP48304 166 aa11.6□□□□□ -0.55
PNKP-202ENST00000593706 LUMP51884 338 aaPredicted RBP11.6□□□□□ -0.55
PNKP-202ENST00000593706 DEFB136Q30KP8 78 aa11.6□□□□□ -0.55
PNKP-202ENST00000593706 TEX38Q6PEX7 206 aa11.6□□□□□ -0.55
PNKP-202ENST00000593706 GLIPR1L1Q6UWM5 242 aa11.6□□□□□ -0.55
PNKP-202ENST00000593706 IZUMO2Q6UXV1 221 aa11.6□□□□□ -0.55
PNKP-202ENST00000593706 ZNF497Q6ZNH5 498 aa11.6□□□□□ -0.55
PNKP-202ENST00000593706 MOB3BQ86TA1 216 aa11.6□□□□□ -0.55
PNKP-202ENST00000593706 LRRTM1Q86UE6 522 aa11.6□□□□□ -0.55
PNKP-202ENST00000593706 GAPTQ8N292 157 aa11.6□□□□□ -0.55
PNKP-202ENST00000593706 JAGN1Q8N5M9 183 aa11.6□□□□□ -0.55
PNKP-202ENST00000593706 NKAIN3Q8N8D7 197 aa11.6□□□□□ -0.55
PNKP-202ENST00000593706 TMEM104Q8NE00 496 aa11.6□□□□□ -0.55
PNKP-202ENST00000593706 OR5M8Q8NGP6 311 aa11.6□□□□□ -0.55
PNKP-202ENST00000593706 OR8U1Q8NH10 309 aa11.6□□□□□ -0.55
PNKP-202ENST00000593706 MRPS24Q96EL2 167 aaKnown RBP11.6□□□□□ -0.55
PNKP-202ENST00000593706 CYYR1Q96J86 154 aa11.6□□□□□ -0.55
PNKP-202ENST00000593706 UQCC2Q9BRT2 126 aa11.6□□□□□ -0.55
PNKP-202ENST00000593706 GON7Q9BXV9 100 aa11.6□□□□□ -0.55
PNKP-202ENST00000593706 IGHV3-72A0A0B4J1Y9 119 aa11.59□□□□□ -0.55
PNKP-202ENST00000593706 TRAV39A0A0B4J263 110 aa11.59□□□□□ -0.55
PNKP-202ENST00000593706 C15orf65H3BRN8 121 aa11.59□□□□□ -0.55
PNKP-202ENST00000593706 CCRL2O00421 344 aa11.59□□□□□ -0.55
PNKP-202ENST00000593706 RPLP1P05386 114 aaKnown RBP11.59□□□□□ -0.55
PNKP-202ENST00000593706 GPR50Q13585 617 aa11.59□□□□□ -0.55
PNKP-202ENST00000593706 GPR176Q14439 515 aa11.59□□□□□ -0.55
PNKP-202ENST00000593706 ACSM3Q53FZ2 586 aa11.59□□□□□ -0.55
PNKP-202ENST00000593706 CXorf66Q5JRM2 361 aaPredicted RBP11.59□□□□□ -0.55
PNKP-202ENST00000593706 SIGIRRQ6IA17 410 aa11.59□□□□□ -0.55
PNKP-202ENST00000593706 MS4A15Q8N5U1 240 aa11.59□□□□□ -0.55
PNKP-202ENST00000593706 OR10A7Q8NGE5 316 aa11.59□□□□□ -0.55
PNKP-202ENST00000593706 PHYHIPQ92561 330 aa11.59□□□□□ -0.55
PNKP-202ENST00000593706 Q96M66 194 aa11.59□□□□□ -0.55
PNKP-202ENST00000593706 PRR25Q96S07 402 aa11.59□□□□□ -0.55
PNKP-202ENST00000593706 SCN3BQ9NY72 215 aa11.59□□□□□ -0.55
PNKP-202ENST00000593706 IGHV1-3A0A0C4DH29 117 aa11.58□□□□□ -0.56
PNKP-202ENST00000593706 TMEM30CPA0ZSE6 113 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms