RNA–Protein interactions for RNA: ENST00000592354.5

CAPNS1-213, Transcript of calpain small subunit 1, humanhuman

TSL 2

Gene CAPNS1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-213ENST00000592354 ZNF816Q0VGE8 651 aaPredicted RBP10.66□□□□□ -0.7
CAPNS1-213ENST00000592354 MPV17LQ2QL34 196 aa10.66□□□□□ -0.7
CAPNS1-213ENST00000592354 OR2W3Q7Z3T1 314 aa10.66□□□□□ -0.7
CAPNS1-213ENST00000592354 MRPL41Q8IXM3 137 aaKnown RBP10.66□□□□□ -0.7
CAPNS1-213ENST00000592354 NANOGP1Q8N7R0 232 aa10.66□□□□□ -0.7
CAPNS1-213ENST00000592354 KLHL30-AS1Q8NEE0 82 aa10.66□□□□□ -0.7
CAPNS1-213ENST00000592354 OR10A7Q8NGE5 316 aa10.66□□□□□ -0.7
CAPNS1-213ENST00000592354 OR51D1Q8NGF3 324 aa10.66□□□□□ -0.7
CAPNS1-213ENST00000592354 CHPT1Q8WUD6 406 aa10.66□□□□□ -0.7
CAPNS1-213ENST00000592354 GHSRQ92847 366 aa10.66□□□□□ -0.7
CAPNS1-213ENST00000592354 MUL1Q969V5 352 aa10.66□□□□□ -0.7
CAPNS1-213ENST00000592354 CYYR1Q96J86 154 aa10.66□□□□□ -0.7
CAPNS1-213ENST00000592354 DUX3Q96PT4 197 aa10.66□□□□□ -0.7
CAPNS1-213ENST00000592354 CCDC90BQ9GZT6 254 aa10.66□□□□□ -0.7
CAPNS1-213ENST00000592354 Q9H521 79 aa10.66□□□□□ -0.7
CAPNS1-213ENST00000592354 ERGIC3Q9Y282 383 aa10.66□□□□□ -0.7
CAPNS1-213ENST00000592354 TRBV5-5A0A0J9YX44 114 aa10.65□□□□□ -0.7
CAPNS1-213ENST00000592354 A0A1W2PPK0 400 aa10.65□□□□□ -0.7
CAPNS1-213ENST00000592354 LINC01548A6NM66 108 aa10.65□□□□□ -0.7
CAPNS1-213ENST00000592354 NCBP2LA6PVI3 153 aaKnown RBP10.65□□□□□ -0.7
CAPNS1-213ENST00000592354 SLC31A2O15432 143 aa10.65□□□□□ -0.7
CAPNS1-213ENST00000592354 DENRO43583 198 aaKnown RBP10.65□□□□□ -0.7
CAPNS1-213ENST00000592354 RGS10O43665 173 aa10.65□□□□□ -0.7
CAPNS1-213ENST00000592354 DUS4LO95620 317 aaKnown RBP10.65□□□□□ -0.7
CAPNS1-213ENST00000592354 GTF2F2P13984 249 aa10.65□□□□□ -0.7
CAPNS1-213ENST00000592354 MAP2K4P45985 399 aa10.65□□□□□ -0.7
CAPNS1-213ENST00000592354 THBS3P49746 956 aa10.65□□□□□ -0.7
CAPNS1-213ENST00000592354 RBM48Q5RL73 367 aaKnown RBP10.65□□□□□ -0.7
CAPNS1-213ENST00000592354 ZNF497Q6ZNH5 498 aa10.65□□□□□ -0.7
CAPNS1-213ENST00000592354 SLC16A12Q6ZSM3 486 aa10.65□□□□□ -0.7
CAPNS1-213ENST00000592354 LINC00596Q86U02 117 aa10.65□□□□□ -0.7
CAPNS1-213ENST00000592354 FOXRED2Q8IWF2 684 aa10.65□□□□□ -0.7
CAPNS1-213ENST00000592354 IZUMO1Q8IYV9 350 aa10.65□□□□□ -0.7
CAPNS1-213ENST00000592354 STPG2Q8N412 459 aa10.65□□□□□ -0.7
CAPNS1-213ENST00000592354 PRR18Q8N4B5 295 aa10.65□□□□□ -0.7
CAPNS1-213ENST00000592354 JAGN1Q8N5M9 183 aa10.65□□□□□ -0.7
CAPNS1-213ENST00000592354 OR10V1Q8NGI7 309 aa10.65□□□□□ -0.7
CAPNS1-213ENST00000592354 EAF1Q96JC9 268 aaPredicted RBP10.65□□□□□ -0.7
CAPNS1-213ENST00000592354 PGLYRP3Q96LB9 341 aa10.65□□□□□ -0.7
CAPNS1-213ENST00000592354 OR14A2Q96R54 314 aa10.65□□□□□ -0.7
CAPNS1-213ENST00000592354 DUSP21Q9H596 190 aa10.65□□□□□ -0.7
CAPNS1-213ENST00000592354 GFOD1Q9NXC2 390 aa10.65□□□□□ -0.7
CAPNS1-213ENST00000592354 CKLFQ9UBR5 152 aa10.65□□□□□ -0.7
CAPNS1-213ENST00000592354 MRPS28Q9Y2Q9 187 aaKnown RBP10.65□□□□□ -0.7
CAPNS1-213ENST00000592354 DNAH3Q8TD57 4116 aa10.65□□□□□ -0.7
CAPNS1-213ENST00000592354 C12orf77C9JDV5 145 aa10.64□□□□□ -0.71
CAPNS1-213ENST00000592354 IGHG2P01859 326 aa10.64□□□□□ -0.71
CAPNS1-213ENST00000592354 GAPDHP04406 335 aaKnown RBP10.64□□□□□ -0.71
CAPNS1-213ENST00000592354 GZMHP20718 246 aa10.64□□□□□ -0.71
CAPNS1-213ENST00000592354 RPS11P62280 158 aaKnown RBP eCLIP10.64□□□□□ -0.71
CAPNS1-213ENST00000592354 SLC35B1P78383 322 aa10.64□□□□□ -0.71
CAPNS1-213ENST00000592354 IRF3Q14653 427 aa10.64□□□□□ -0.71
CAPNS1-213ENST00000592354 Q499Y3 187 aa10.64□□□□□ -0.71
CAPNS1-213ENST00000592354 DEFB121Q5J5C9 76 aa10.64□□□□□ -0.71
CAPNS1-213ENST00000592354 DMKNQ6E0U4 476 aaPredicted RBP10.64□□□□□ -0.71
CAPNS1-213ENST00000592354 C11orf87Q6NUJ2 197 aa10.64□□□□□ -0.71
CAPNS1-213ENST00000592354 LCNL1Q6ZST4 164 aa10.64□□□□□ -0.71
CAPNS1-213ENST00000592354 OR4K15Q8NH41 348 aa10.64□□□□□ -0.71
CAPNS1-213ENST00000592354 RTN4IP1Q8WWV3 396 aaPredicted RBP10.64□□□□□ -0.71
CAPNS1-213ENST00000592354 MND1Q9BWT6 205 aa10.64□□□□□ -0.71
CAPNS1-213ENST00000592354 LSM2Q9Y333 95 aaKnown RBP10.64□□□□□ -0.71
CAPNS1-213ENST00000592354 ZNF736B4DX44 427 aaPredicted RBP10.63□□□□□ -0.71
CAPNS1-213ENST00000592354 ZNF780AO75290 641 aaPredicted RBP10.63□□□□□ -0.71
CAPNS1-213ENST00000592354 MT-ND4P03905 459 aa10.63□□□□□ -0.71
CAPNS1-213ENST00000592354 MAS1P04201 325 aa10.63□□□□□ -0.71
CAPNS1-213ENST00000592354 CELP19835 753 aa10.63□□□□□ -0.71
CAPNS1-213ENST00000592354 FSTP19883 344 aa10.63□□□□□ -0.71
CAPNS1-213ENST00000592354 GPR12P47775 334 aa10.63□□□□□ -0.71
CAPNS1-213ENST00000592354 MED22Q15528 200 aa10.63□□□□□ -0.71
CAPNS1-213ENST00000592354 YIF1BQ5BJH7 314 aa10.63□□□□□ -0.71
CAPNS1-213ENST00000592354 SYT6Q5T7P8 510 aaPredicted RBP10.63□□□□□ -0.71
CAPNS1-213ENST00000592354 RNLSQ5VYX0 342 aa10.63□□□□□ -0.71
CAPNS1-213ENST00000592354 AWAT2Q6E213 333 aa10.63□□□□□ -0.71
CAPNS1-213ENST00000592354 GLIPR1L1Q6UWM5 242 aa10.63□□□□□ -0.71
CAPNS1-213ENST00000592354 TGIF2LXQ8IUE1 241 aa10.63□□□□□ -0.71
CAPNS1-213ENST00000592354 Q8N6K4 173 aa10.63□□□□□ -0.71
CAPNS1-213ENST00000592354 Q8N9W7 124 aa10.63□□□□□ -0.71
CAPNS1-213ENST00000592354 TMEM104Q8NE00 496 aa10.63□□□□□ -0.71
CAPNS1-213ENST00000592354 OR52M1Q8NGK5 317 aa10.63□□□□□ -0.71
CAPNS1-213ENST00000592354 OR2T10Q8NGZ9 312 aa10.63□□□□□ -0.71
CAPNS1-213ENST00000592354 DPF1Q92782 380 aa10.63□□□□□ -0.71
CAPNS1-213ENST00000592354 BANF2Q9H503 90 aa10.63□□□□□ -0.71
CAPNS1-213ENST00000592354 ETAA1Q9NY74 926 aa10.63□□□□□ -0.71
CAPNS1-213ENST00000592354 RCC2Q9P258 522 aaKnown RBP10.63□□□□□ -0.71
CAPNS1-213ENST00000592354 TRAPPC2LQ9UL33 140 aa10.63□□□□□ -0.71
CAPNS1-213ENST00000592354 ORC5O43913 435 aa10.62□□□□□ -0.71
CAPNS1-213ENST00000592354 RPLP1P05386 114 aaKnown RBP10.62□□□□□ -0.71
CAPNS1-213ENST00000592354 HSMCR30P0CW71 290 aa10.62□□□□□ -0.71
CAPNS1-213ENST00000592354 IL3RAP26951 378 aa10.62□□□□□ -0.71
CAPNS1-213ENST00000592354 RAB25P57735 213 aa10.62□□□□□ -0.71
CAPNS1-213ENST00000592354 TAS2R43P59537 309 aa10.62□□□□□ -0.71
CAPNS1-213ENST00000592354 EGFEM1PQ0D2K5 195 aa10.62□□□□□ -0.71
CAPNS1-213ENST00000592354 EBI3Q14213 229 aa10.62□□□□□ -0.71
CAPNS1-213ENST00000592354 SPHARQ15513 63 aa10.62□□□□□ -0.71
CAPNS1-213ENST00000592354 DEFB136Q30KP8 78 aa10.62□□□□□ -0.71
CAPNS1-213ENST00000592354 RAB12Q6IQ22 244 aa10.62□□□□□ -0.71
CAPNS1-213ENST00000592354 PRSS48Q7RTY5 328 aa10.62□□□□□ -0.71
CAPNS1-213ENST00000592354 LINC00311Q8N616 119 aa10.62□□□□□ -0.71
CAPNS1-213ENST00000592354 ZNF439Q8NDP4 499 aa10.62□□□□□ -0.71
CAPNS1-213ENST00000592354 OR1L1Q8NH94 360 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms