RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 KCTD12Q96CX2 325 aaKnown RBP17.46■□□□□ 0.39
R3HDM4-206ENST00000590454 KIRREL1Q96J84 757 aa17.46■□□□□ 0.39
R3HDM4-206ENST00000590454 LINC00574Q9H8X3 128 aa17.46■□□□□ 0.39
R3HDM4-206ENST00000590454 MBNL3Q9NUK0 354 aaKnown RBP17.46■□□□□ 0.39
R3HDM4-206ENST00000590454 MDFIC2A0A1B0GVS7 189 aa17.45■□□□□ 0.38
R3HDM4-206ENST00000590454 hCG_1809904A0A1W2PP81 198 aa17.45■□□□□ 0.38
R3HDM4-206ENST00000590454 A0A1W2PPE2 198 aa17.45■□□□□ 0.38
R3HDM4-206ENST00000590454 A0A1W2PR64 198 aa17.45■□□□□ 0.38
R3HDM4-206ENST00000590454 A0A1W2PRV1 198 aa17.45■□□□□ 0.38
R3HDM4-206ENST00000590454 POM121CA8CG34 1229 aa17.45■□□□□ 0.38
R3HDM4-206ENST00000590454 EIF4EP06730 217 aaKnown RBP17.45■□□□□ 0.38
R3HDM4-206ENST00000590454 ZNF182P17025 639 aaPredicted RBP17.45■□□□□ 0.38
R3HDM4-206ENST00000590454 FAM189A2Q15884 450 aa17.45■□□□□ 0.38
R3HDM4-206ENST00000590454 UBE2NLQ5JXB2 153 aa17.45■□□□□ 0.38
R3HDM4-206ENST00000590454 NCR3LG1Q68D85 454 aa17.45■□□□□ 0.38
R3HDM4-206ENST00000590454 IZUMO1Q8IYV9 350 aa17.45■□□□□ 0.38
R3HDM4-206ENST00000590454 SIGLECL1Q8N7X8 197 aa17.45■□□□□ 0.38
R3HDM4-206ENST00000590454 OR1L1Q8NH94 360 aa17.45■□□□□ 0.38
R3HDM4-206ENST00000590454 C17orf50Q8WW18 174 aa17.45■□□□□ 0.38
R3HDM4-206ENST00000590454 LEAP2Q969E1 77 aa17.45■□□□□ 0.38
R3HDM4-206ENST00000590454 ARL11Q969Q4 196 aa17.45■□□□□ 0.38
R3HDM4-206ENST00000590454 ZNF48Q96MX3 618 aaPredicted RBP17.45■□□□□ 0.38
R3HDM4-206ENST00000590454 MS4A7Q9GZW8 240 aaPredicted RBP17.45■□□□□ 0.38
R3HDM4-206ENST00000590454 ABCG5Q9H222 651 aa17.45■□□□□ 0.38
R3HDM4-206ENST00000590454 TMEM133Q9H2Q1 129 aa17.45■□□□□ 0.38
R3HDM4-206ENST00000590454 CHMP1AQ9HD42 196 aaPredicted RBP17.45■□□□□ 0.38
R3HDM4-206ENST00000590454 IDI2-AS1Q9NZ38 188 aa17.45■□□□□ 0.38
R3HDM4-206ENST00000590454 DPPA5A6NC42 116 aa17.44■□□□□ 0.38
R3HDM4-206ENST00000590454 HPGDSO60760 199 aa17.44■□□□□ 0.38
R3HDM4-206ENST00000590454 IGHV3-7P01780 117 aa17.44■□□□□ 0.38
R3HDM4-206ENST00000590454 GZMHP20718 246 aa17.44■□□□□ 0.38
R3HDM4-206ENST00000590454 NFYBP25208 207 aa17.44■□□□□ 0.38
R3HDM4-206ENST00000590454 UBE2E1P51965 193 aa17.44■□□□□ 0.38
R3HDM4-206ENST00000590454 ZNF260Q3ZCT1 412 aa17.44■□□□□ 0.38
R3HDM4-206ENST00000590454 ZNF880Q6PDB4 577 aa17.44■□□□□ 0.38
R3HDM4-206ENST00000590454 AJUBAQ96IF1 538 aa17.44■□□□□ 0.38
R3HDM4-206ENST00000590454 CMSS1Q9BQ75 279 aaKnown RBP17.44■□□□□ 0.38
R3HDM4-206ENST00000590454 HEXA-AS1Q9H8Q6 139 aa17.44■□□□□ 0.38
R3HDM4-206ENST00000590454 TAF9BQ9HBM6 251 aa17.44■□□□□ 0.38
R3HDM4-206ENST00000590454 ZNF286AQ9HBT8 521 aa17.44■□□□□ 0.38
R3HDM4-206ENST00000590454 TRAV18A0A075B6X5 111 aa17.43■□□□□ 0.38
R3HDM4-206ENST00000590454 A0A0U1RQK1 487 aa17.43■□□□□ 0.38
R3HDM4-206ENST00000590454 TMEM235A6NFC5 223 aa17.43■□□□□ 0.38
R3HDM4-206ENST00000590454 NPFFO15130 113 aa17.43■□□□□ 0.38
R3HDM4-206ENST00000590454 ORC5O43913 435 aa17.43■□□□□ 0.38
R3HDM4-206ENST00000590454 PTHLHP12272 177 aa17.43■□□□□ 0.38
R3HDM4-206ENST00000590454 TUSC1Q2TAM9 212 aa17.43■□□□□ 0.38
R3HDM4-206ENST00000590454 LDLRAD2Q5SZI1 272 aa17.43■□□□□ 0.38
R3HDM4-206ENST00000590454 C9orf139Q6ZV77 190 aa17.43■□□□□ 0.38
R3HDM4-206ENST00000590454 PRR18Q8N4B5 295 aa17.43■□□□□ 0.38
R3HDM4-206ENST00000590454 SETD6Q8TBK2 473 aa17.43■□□□□ 0.38
R3HDM4-206ENST00000590454 C12orf4Q9NQ89 552 aa17.43■□□□□ 0.38
R3HDM4-206ENST00000590454 ZNRD1Q9P1U0 126 aa17.43■□□□□ 0.38
R3HDM4-206ENST00000590454 RSL24D1Q9UHA3 163 aaKnown RBP17.43■□□□□ 0.38
R3HDM4-206ENST00000590454 IGHV2-26A0A0B4J1V2 119 aa17.42■□□□□ 0.38
R3HDM4-206ENST00000590454 IGHV3-43A0A0B4J1X8 118 aa17.42■□□□□ 0.38
R3HDM4-206ENST00000590454 HBZP02008 142 aa17.42■□□□□ 0.38
R3HDM4-206ENST00000590454 IGHV3-43DP0DP04 118 aa17.42■□□□□ 0.38
R3HDM4-206ENST00000590454 ELK1P19419 428 aa17.42■□□□□ 0.38
R3HDM4-206ENST00000590454 PAX6P26367 422 aa17.42■□□□□ 0.38
R3HDM4-206ENST00000590454 SAA4P35542 130 aa17.42■□□□□ 0.38
R3HDM4-206ENST00000590454 GUCA2AQ02747 115 aa17.42■□□□□ 0.38
R3HDM4-206ENST00000590454 C6orf183Q5T699 404 aa17.42■□□□□ 0.38
R3HDM4-206ENST00000590454 FOXB2Q5VYV0 432 aa17.42■□□□□ 0.38
R3HDM4-206ENST00000590454 ACOT12Q8WYK0 555 aa17.42■□□□□ 0.38
R3HDM4-206ENST00000590454 DUX5Q96PT3 197 aa17.42■□□□□ 0.38
R3HDM4-206ENST00000590454 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.42■□□□□ 0.38
R3HDM4-206ENST00000590454 ZNF230Q9UIE0 474 aaPredicted RBP17.42■□□□□ 0.38
R3HDM4-206ENST00000590454 TRRAPQ9Y4A5 3859 aa17.42■□□□□ 0.38
R3HDM4-206ENST00000590454 TRBV6-6A0A0A6YYG2 114 aa17.41■□□□□ 0.38
R3HDM4-206ENST00000590454 DNAJC9-AS1A6NH13 148 aa17.41■□□□□ 0.38
R3HDM4-206ENST00000590454 ODF3BA8MYP8 253 aa17.41■□□□□ 0.38
R3HDM4-206ENST00000590454 CD3GP09693 182 aa17.41■□□□□ 0.38
R3HDM4-206ENST00000590454 LOXL3P58215 753 aa17.41■□□□□ 0.38
R3HDM4-206ENST00000590454 DYNC1I2Q13409 638 aaKnown RBP17.41■□□□□ 0.38
R3HDM4-206ENST00000590454 MADCAM1Q13477 382 aa17.41■□□□□ 0.38
R3HDM4-206ENST00000590454 HMGN3Q15651 99 aa17.41■□□□□ 0.38
R3HDM4-206ENST00000590454 DEFB112Q30KQ8 113 aa17.41■□□□□ 0.38
R3HDM4-206ENST00000590454 LHFPL4Q7Z7J7 247 aa17.41■□□□□ 0.38
R3HDM4-206ENST00000590454 ABHD12Q8N2K0 398 aa17.41■□□□□ 0.38
R3HDM4-206ENST00000590454 OR11H6Q8NGC7 330 aa17.41■□□□□ 0.38
R3HDM4-206ENST00000590454 OR13D1Q8NGV5 346 aa17.41■□□□□ 0.38
R3HDM4-206ENST00000590454 NUDCD2Q8WVJ2 157 aa17.41■□□□□ 0.38
R3HDM4-206ENST00000590454 MAFIPQ8WZ33 124 aa17.41■□□□□ 0.38
R3HDM4-206ENST00000590454 Q9N2K0 584 aa17.41■□□□□ 0.38
R3HDM4-206ENST00000590454 CCDC59Q9P031 241 aaKnown RBP17.41■□□□□ 0.38
R3HDM4-206ENST00000590454 MEIOCA2RUB1 952 aa17.4■□□□□ 0.38
R3HDM4-206ENST00000590454 SERPINE3A8MV23 424 aa17.4■□□□□ 0.38
R3HDM4-206ENST00000590454 F2RL2O00254 374 aa17.4■□□□□ 0.38
R3HDM4-206ENST00000590454 CTDSP2O14595 271 aa17.4■□□□□ 0.38
R3HDM4-206ENST00000590454 SSX5O60225 188 aa17.4■□□□□ 0.38
R3HDM4-206ENST00000590454 SCGNO76038 276 aa17.4■□□□□ 0.38
R3HDM4-206ENST00000590454 ARG1P05089 322 aa17.4■□□□□ 0.38
R3HDM4-206ENST00000590454 FCGR3AP08637 254 aa17.4■□□□□ 0.38
R3HDM4-206ENST00000590454 ARFRP1Q13795 201 aa17.4■□□□□ 0.38
R3HDM4-206ENST00000590454 HACD4Q5VWC8 232 aa17.4■□□□□ 0.38
R3HDM4-206ENST00000590454 S100A16Q96FQ6 103 aaKnown RBP17.4■□□□□ 0.38
R3HDM4-206ENST00000590454 DCUN1D5Q9BTE7 237 aa17.4■□□□□ 0.38
R3HDM4-206ENST00000590454 CLEC7AQ9BXN2 247 aa17.4■□□□□ 0.38
R3HDM4-206ENST00000590454 SLIRPQ9GZT3 109 aaKnown RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms