RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 ERVFRD-1P60508 538 aa10.54□□□□□ -0.72
PDE4A-207ENST00000590407 RPS18P62269 152 aaKnown RBP10.54□□□□□ -0.72
PDE4A-207ENST00000590407 GNG3P63215 75 aa10.54□□□□□ -0.72
PDE4A-207ENST00000590407 NCMAPQ5T1S8 102 aa10.54□□□□□ -0.72
PDE4A-207ENST00000590407 THNSL2Q86YJ6 484 aa10.54□□□□□ -0.72
PDE4A-207ENST00000590407 ZNF525Q8N782 197 aa10.54□□□□□ -0.72
PDE4A-207ENST00000590407 OR10V1Q8NGI7 309 aa10.54□□□□□ -0.72
PDE4A-207ENST00000590407 SCGB1C1Q8TD33 95 aa10.54□□□□□ -0.72
PDE4A-207ENST00000590407 NEK7Q8TDX7 302 aa10.54□□□□□ -0.72
PDE4A-207ENST00000590407 RCC1LQ96I51 464 aaKnown RBP10.54□□□□□ -0.72
PDE4A-207ENST00000590407 CTDSP1Q9GZU7 261 aa10.54□□□□□ -0.72
PDE4A-207ENST00000590407 FSCN3Q9NQT6 498 aa10.54□□□□□ -0.72
PDE4A-207ENST00000590407 GAR1Q9NY12 217 aaKnown RBP10.54□□□□□ -0.72
PDE4A-207ENST00000590407 CRIM1Q9NZV1 1036 aa10.54□□□□□ -0.72
PDE4A-207ENST00000590407 TRBV24-1A0A075B6N3 115 aa10.54□□□□□ -0.72
PDE4A-207ENST00000590407 A0A0G2JRQ6 117 aa10.54□□□□□ -0.72
PDE4A-207ENST00000590407 C5orf49A4QMS7 147 aa10.54□□□□□ -0.72
PDE4A-207ENST00000590407 ZNF729A6NN14 1252 aaPredicted RBP10.54□□□□□ -0.72
PDE4A-207ENST00000590407 SYNGR1O43759 233 aa10.54□□□□□ -0.72
PDE4A-207ENST00000590407 CYB5R3P00387 301 aaPredicted RBP10.54□□□□□ -0.72
PDE4A-207ENST00000590407 HBG1P69891 147 aa10.54□□□□□ -0.72
PDE4A-207ENST00000590407 HBG2P69892 147 aa10.54□□□□□ -0.72
PDE4A-207ENST00000590407 ZNF674Q2M3X9 581 aa10.54□□□□□ -0.72
PDE4A-207ENST00000590407 FAM58AQ8N1B3 248 aa10.54□□□□□ -0.72
PDE4A-207ENST00000590407 PINX1Q96BK5 328 aaKnown RBP10.54□□□□□ -0.72
PDE4A-207ENST00000590407 FAM173AQ9BQD7 235 aa10.54□□□□□ -0.72
PDE4A-207ENST00000590407 RPRMQ9NS64 109 aa10.54□□□□□ -0.72
PDE4A-207ENST00000590407 IL36RNQ9UBH0 155 aa10.54□□□□□ -0.72
PDE4A-207ENST00000590407 TRAV20A0A0B4J274 112 aa10.53□□□□□ -0.72
PDE4A-207ENST00000590407 PINLYPA6NC86 204 aa10.53□□□□□ -0.72
PDE4A-207ENST00000590407 CLDN34H7C241 214 aa10.53□□□□□ -0.72
PDE4A-207ENST00000590407 SYNGR2O43760 224 aa10.53□□□□□ -0.72
PDE4A-207ENST00000590407 HIST1H2BKO60814 126 aa10.53□□□□□ -0.72
PDE4A-207ENST00000590407 HIST1H2BJP06899 126 aa10.53□□□□□ -0.72
PDE4A-207ENST00000590407 HIST1H2BOP23527 126 aa10.53□□□□□ -0.72
PDE4A-207ENST00000590407 HIST1H2BBP33778 126 aa10.53□□□□□ -0.72
PDE4A-207ENST00000590407 CLDN18P56856 261 aa10.53□□□□□ -0.72
PDE4A-207ENST00000590407 HIST1H2BDP58876 126 aa10.53□□□□□ -0.72
PDE4A-207ENST00000590407 HIST1H2BCP62807 126 aa10.53□□□□□ -0.72
PDE4A-207ENST00000590407 HIST2H2BEQ16778 126 aa10.53□□□□□ -0.72
PDE4A-207ENST00000590407 LRRC75BQ2VPJ9 315 aa10.53□□□□□ -0.72
PDE4A-207ENST00000590407 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.53□□□□□ -0.72
PDE4A-207ENST00000590407 ZNF787Q6DD87 383 aa10.53□□□□□ -0.72
PDE4A-207ENST00000590407 TCEAL6Q6IPX3 200 aa10.53□□□□□ -0.72
PDE4A-207ENST00000590407 C20orf204Q6ZNR8 217 aa10.53□□□□□ -0.72
PDE4A-207ENST00000590407 CENPVQ7Z7K6 275 aaPredicted RBP10.53□□□□□ -0.72
PDE4A-207ENST00000590407 MRGPRGQ86SM5 289 aa10.53□□□□□ -0.72
PDE4A-207ENST00000590407 C1orf87Q8N0U7 546 aa10.53□□□□□ -0.72
PDE4A-207ENST00000590407 CA5BP1Q8WTZ4 195 aa10.53□□□□□ -0.72
PDE4A-207ENST00000590407 HIST1H2BHQ93079 126 aa10.53□□□□□ -0.72
PDE4A-207ENST00000590407 HIST1H2BNQ99877 126 aa10.53□□□□□ -0.72
PDE4A-207ENST00000590407 HIST1H2BMQ99879 126 aa10.53□□□□□ -0.72
PDE4A-207ENST00000590407 AGMATQ9BSE5 352 aa10.53□□□□□ -0.72
PDE4A-207ENST00000590407 PRRG4Q9BZD6 226 aa10.53□□□□□ -0.72
PDE4A-207ENST00000590407 ZNF552Q9H707 407 aaPredicted RBP10.53□□□□□ -0.72
PDE4A-207ENST00000590407 ZNF703Q9H7S9 590 aaPredicted RBP10.53□□□□□ -0.72
PDE4A-207ENST00000590407 LIN7CQ9NUP9 197 aaKnown RBP10.53□□□□□ -0.72
PDE4A-207ENST00000590407 DLL3Q9NYJ7 618 aa10.53□□□□□ -0.72
PDE4A-207ENST00000590407 TIMM9Q9Y5J7 89 aa10.53□□□□□ -0.72
PDE4A-207ENST00000590407 ANKRD30BLA7E2S9 258 aa10.52□□□□□ -0.72
PDE4A-207ENST00000590407 J3QT63 122 aa10.52□□□□□ -0.72
PDE4A-207ENST00000590407 J3QW42 95 aa10.52□□□□□ -0.72
PDE4A-207ENST00000590407 YIF1AO95070 293 aa10.52□□□□□ -0.72
PDE4A-207ENST00000590407 SYNGR4O95473 234 aa10.52□□□□□ -0.72
PDE4A-207ENST00000590407 CER1O95813 267 aa10.52□□□□□ -0.72
PDE4A-207ENST00000590407 IFNA1P01562 189 aa10.52□□□□□ -0.72
PDE4A-207ENST00000590407 IGKV1-39P01597 117 aa10.52□□□□□ -0.72
PDE4A-207ENST00000590407 HLA-HP01893 362 aa10.52□□□□□ -0.72
PDE4A-207ENST00000590407 OPN1MWP04001 364 aa10.52□□□□□ -0.72
PDE4A-207ENST00000590407 IGKV1D-39P04432 117 aa10.52□□□□□ -0.72
PDE4A-207ENST00000590407 OPN1MW2P0DN77 364 aa10.52□□□□□ -0.72
PDE4A-207ENST00000590407 OPN1MW3P0DN78 364 aa10.52□□□□□ -0.72
PDE4A-207ENST00000590407 PSG2P11465 335 aa10.52□□□□□ -0.72
PDE4A-207ENST00000590407 TDGF1P13385 188 aa10.52□□□□□ -0.72
PDE4A-207ENST00000590407 OTX2P32243 289 aa10.52□□□□□ -0.72
PDE4A-207ENST00000590407 NDUFA6P56556 154 aa10.52□□□□□ -0.72
PDE4A-207ENST00000590407 PYY3Q5JQD4 70 aa10.52□□□□□ -0.72
PDE4A-207ENST00000590407 SLC25A24Q6NUK1 477 aa10.52□□□□□ -0.72
PDE4A-207ENST00000590407 ZNF343Q6P1L6 599 aa10.52□□□□□ -0.72
PDE4A-207ENST00000590407 Q6P435 159 aa10.52□□□□□ -0.72
PDE4A-207ENST00000590407 SLC23A3Q6PIS1 610 aa10.52□□□□□ -0.72
PDE4A-207ENST00000590407 C5orf24Q7Z6I8 188 aa10.52□□□□□ -0.72
PDE4A-207ENST00000590407 BATF2Q8N1L9 274 aa10.52□□□□□ -0.72
PDE4A-207ENST00000590407 GPHA2Q96T91 129 aa10.52□□□□□ -0.72
PDE4A-207ENST00000590407 ZPBPQ9BS86 351 aa10.52□□□□□ -0.72
PDE4A-207ENST00000590407 SDF2L1Q9HCN8 221 aa10.52□□□□□ -0.72
PDE4A-207ENST00000590407 GNG13Q9P2W3 67 aa10.52□□□□□ -0.72
PDE4A-207ENST00000590407 B4GALT7Q9UBV7 327 aa10.52□□□□□ -0.72
PDE4A-207ENST00000590407 VAX2Q9UIW0 290 aa10.52□□□□□ -0.72
PDE4A-207ENST00000590407 ERRFI1Q9UJM3 462 aaPredicted RBP10.52□□□□□ -0.72
PDE4A-207ENST00000590407 TGIF2-C20orf24A0A0A6YYL0 155 aa10.52□□□□□ -0.73
PDE4A-207ENST00000590407 PHOX2AO14813 284 aa10.52□□□□□ -0.73
PDE4A-207ENST00000590407 IGLV2-14P01704 120 aa10.52□□□□□ -0.73
PDE4A-207ENST00000590407 PLP2Q04941 152 aa10.52□□□□□ -0.73
PDE4A-207ENST00000590407 TESK1Q15569 626 aa10.52□□□□□ -0.73
PDE4A-207ENST00000590407 ZNF726P1Q15940 193 aa10.52□□□□□ -0.73
PDE4A-207ENST00000590407 TMEM41BQ5BJD5 291 aa10.52□□□□□ -0.73
PDE4A-207ENST00000590407 DCAF12Q5T6F0 453 aa10.52□□□□□ -0.73
PDE4A-207ENST00000590407 CDCP2Q5VXM1 449 aa10.52□□□□□ -0.73
PDE4A-207ENST00000590407 Q6ZRM9 215 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms