RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 CLEC7AQ9BXN2 247 aa8.42□□□□□ -1.06
SDF2-208ENST00000589788 TMEM133Q9H2Q1 129 aa8.42□□□□□ -1.06
SDF2-208ENST00000589788 PTTG2Q9NZH5 202 aa8.42□□□□□ -1.06
SDF2-208ENST00000589788 KIF25Q9UIL4 384 aa8.42□□□□□ -1.06
SDF2-208ENST00000589788 AK6Q9Y3D8 172 aaKnown RBP8.42□□□□□ -1.06
SDF2-208ENST00000589788 TBL2Q9Y4P3 447 aaKnown RBP8.42□□□□□ -1.06
SDF2-208ENST00000589788 V9GY05 133 aa8.42□□□□□ -1.06
SDF2-208ENST00000589788 IGHV2-26A0A0B4J1V2 119 aa8.41□□□□□ -1.06
SDF2-208ENST00000589788 SMIM30A4D0T7 59 aa8.41□□□□□ -1.06
SDF2-208ENST00000589788 ZNF729A6NN14 1252 aaPredicted RBP8.41□□□□□ -1.06
SDF2-208ENST00000589788 IFITM5A6NNB3 132 aa8.41□□□□□ -1.06
SDF2-208ENST00000589788 H3BUX3 64 aa8.41□□□□□ -1.06
SDF2-208ENST00000589788 GPR137BO60478 399 aa8.41□□□□□ -1.06
SDF2-208ENST00000589788 UBBP0CG47 229 aa8.41□□□□□ -1.06
SDF2-208ENST00000589788 OMGP23515 440 aa8.41□□□□□ -1.06
SDF2-208ENST00000589788 OR10A3P58181 314 aa8.41□□□□□ -1.06
SDF2-208ENST00000589788 RPL15P61313 204 aaKnown RBP8.41□□□□□ -1.06
SDF2-208ENST00000589788 TAF9Q16594 264 aa8.41□□□□□ -1.06
SDF2-208ENST00000589788 LRRC75BQ2VPJ9 315 aa8.41□□□□□ -1.06
SDF2-208ENST00000589788 ZNF626Q68DY1 528 aa8.41□□□□□ -1.06
SDF2-208ENST00000589788 HEPN1Q6WQI6 88 aa8.41□□□□□ -1.06
SDF2-208ENST00000589788 LYPD6Q86Y78 171 aa8.41□□□□□ -1.06
SDF2-208ENST00000589788 OR4F5Q8NH21 305 aa8.41□□□□□ -1.06
SDF2-208ENST00000589788 SSX3Q99909 188 aa8.41□□□□□ -1.06
SDF2-208ENST00000589788 SELENOIQ9C0D9 397 aa8.41□□□□□ -1.06
SDF2-208ENST00000589788 SLIRPQ9GZT3 109 aaKnown RBP8.41□□□□□ -1.06
SDF2-208ENST00000589788 CST11Q9H112 138 aa8.41□□□□□ -1.06
SDF2-208ENST00000589788 NCOR1P1Q9H4R4 102 aa8.41□□□□□ -1.06
SDF2-208ENST00000589788 BANF2Q9H503 90 aa8.41□□□□□ -1.06
SDF2-208ENST00000589788 ZMAT4Q9H898 229 aa8.41□□□□□ -1.06
SDF2-208ENST00000589788 SPACA1Q9HBV2 294 aa8.41□□□□□ -1.06
SDF2-208ENST00000589788 GHRLQ9UBU3 117 aa8.41□□□□□ -1.06
SDF2-208ENST00000589788 VPREB3Q9UKI3 123 aa8.41□□□□□ -1.06
SDF2-208ENST00000589788 KBTBD11-OT1A0A1B0GTJ5 212 aa8.4□□□□□ -1.06
SDF2-208ENST00000589788 TMEM30CPA0ZSE6 113 aa8.4□□□□□ -1.06
SDF2-208ENST00000589788 ODF3BA8MYP8 253 aa8.4□□□□□ -1.06
SDF2-208ENST00000589788 H3BUI4 141 aa8.4□□□□□ -1.06
SDF2-208ENST00000589788 AIPO00170 330 aa8.4□□□□□ -1.06
SDF2-208ENST00000589788 SLC17A2O00624 439 aa8.4□□□□□ -1.06
SDF2-208ENST00000589788 MMP23AO75900 390 aa8.4□□□□□ -1.06
SDF2-208ENST00000589788 MGMTP16455 207 aa8.4□□□□□ -1.06
SDF2-208ENST00000589788 NFYBP25208 207 aa8.4□□□□□ -1.06
SDF2-208ENST00000589788 RAG2P55895 527 aa8.4□□□□□ -1.06
SDF2-208ENST00000589788 PAX5Q02548 391 aa8.4□□□□□ -1.06
SDF2-208ENST00000589788 RBM39Q14498 530 aaKnown RBP8.4□□□□□ -1.06
SDF2-208ENST00000589788 C1orf100Q5SVJ3 147 aa8.4□□□□□ -1.06
SDF2-208ENST00000589788 RSBN1Q5VWQ0 802 aaPredicted RBP8.4□□□□□ -1.06
SDF2-208ENST00000589788 DHRS7BQ6IAN0 325 aaPredicted RBP8.4□□□□□ -1.06
SDF2-208ENST00000589788 SLC35E4Q6ICL7 350 aa8.4□□□□□ -1.06
SDF2-208ENST00000589788 LHFPL4Q7Z7J7 247 aa8.4□□□□□ -1.06
SDF2-208ENST00000589788 RTN4RL2Q86UN3 420 aa8.4□□□□□ -1.06
SDF2-208ENST00000589788 ABHD12Q8N2K0 398 aa8.4□□□□□ -1.06
SDF2-208ENST00000589788 OR6M1Q8NGM8 313 aa8.4□□□□□ -1.06
SDF2-208ENST00000589788 OR13A1Q8NGR1 328 aa8.4□□□□□ -1.06
SDF2-208ENST00000589788 PLPPR1Q8TBJ4 325 aa8.4□□□□□ -1.06
SDF2-208ENST00000589788 AP3S1Q92572 193 aa8.4□□□□□ -1.06
SDF2-208ENST00000589788 TAF15Q92804 592 aaKnown RBP eCLIP8.4□□□□□ -1.06
SDF2-208ENST00000589788 FAM46BQ96A09 425 aa8.4□□□□□ -1.06
SDF2-208ENST00000589788 MALSU1Q96EH3 234 aa8.4□□□□□ -1.06
SDF2-208ENST00000589788 AJUBAQ96IF1 538 aa8.4□□□□□ -1.06
SDF2-208ENST00000589788 NXF2Q9GZY0 626 aaKnown RBP8.4□□□□□ -1.06
SDF2-208ENST00000589788 MEGF9Q9H1U4 602 aa8.4□□□□□ -1.06
SDF2-208ENST00000589788 ABCB10Q9NRK6 738 aa8.4□□□□□ -1.06
SDF2-208ENST00000589788 ZNF581Q9P0T4 197 aa8.4□□□□□ -1.06
SDF2-208ENST00000589788 A3GALT2U3KPV4 340 aa8.4□□□□□ -1.06
SDF2-208ENST00000589788 FAM172BPA6NC97 362 aa8.39□□□□□ -1.07
SDF2-208ENST00000589788 FAM90A10PA6NDY2 464 aa8.39□□□□□ -1.07
SDF2-208ENST00000589788 FAM90A18PA6NE21 464 aa8.39□□□□□ -1.07
SDF2-208ENST00000589788 FAM90A16PA6NEW6 464 aa8.39□□□□□ -1.07
SDF2-208ENST00000589788 FAM90A20PA6NIJ5 464 aa8.39□□□□□ -1.07
SDF2-208ENST00000589788 FAM90A8PA6NJQ4 464 aa8.39□□□□□ -1.07
SDF2-208ENST00000589788 FAM90A7PA6NKC0 464 aa8.39□□□□□ -1.07
SDF2-208ENST00000589788 FAM90A22PA8MWA6 464 aa8.39□□□□□ -1.07
SDF2-208ENST00000589788 FAM90A12PA8MX19 464 aa8.39□□□□□ -1.07
SDF2-208ENST00000589788 FAM90A5PA8MXJ8 464 aa8.39□□□□□ -1.07
SDF2-208ENST00000589788 FAM90A23PA8MXZ1 464 aa8.39□□□□□ -1.07
SDF2-208ENST00000589788 MCRIP1C9JLW8 97 aa8.39□□□□□ -1.07
SDF2-208ENST00000589788 TOR1AO14656 332 aa8.39□□□□□ -1.07
SDF2-208ENST00000589788 MPIG6BO95866 241 aa8.39□□□□□ -1.07
SDF2-208ENST00000589788 FAM90A15PP0C7V4 464 aa8.39□□□□□ -1.07
SDF2-208ENST00000589788 FAM90A13PP0C7W8 464 aa8.39□□□□□ -1.07
SDF2-208ENST00000589788 FAM90A14PP0C7W9 464 aa8.39□□□□□ -1.07
SDF2-208ENST00000589788 FAM90A24PP0C7X0 464 aa8.39□□□□□ -1.07
SDF2-208ENST00000589788 MDKP21741 143 aaPredicted RBP8.39□□□□□ -1.07
SDF2-208ENST00000589788 PAX6P26367 422 aa8.39□□□□□ -1.07
SDF2-208ENST00000589788 HTR1DP28221 377 aa8.39□□□□□ -1.07
SDF2-208ENST00000589788 HTR2CP28335 458 aa8.39□□□□□ -1.07
SDF2-208ENST00000589788 RANBP1P43487 201 aa8.39□□□□□ -1.07
SDF2-208ENST00000589788 PRRX1P54821 245 aa8.39□□□□□ -1.07
SDF2-208ENST00000589788 FAM189A2Q15884 450 aa8.39□□□□□ -1.07
SDF2-208ENST00000589788 SSX2Q16385 188 aa8.39□□□□□ -1.07
SDF2-208ENST00000589788 LY6EQ16553 131 aa8.39□□□□□ -1.07
SDF2-208ENST00000589788 AANATQ16613 207 aa8.39□□□□□ -1.07
SDF2-208ENST00000589788 PLA1AQ53H76 456 aa8.39□□□□□ -1.07
SDF2-208ENST00000589788 IDNKQ5T6J7 187 aa8.39□□□□□ -1.07
SDF2-208ENST00000589788 MINOS1Q5TGZ0 78 aa8.39□□□□□ -1.07
SDF2-208ENST00000589788 RAB12Q6IQ22 244 aa8.39□□□□□ -1.07
SDF2-208ENST00000589788 TMEM104Q8NE00 496 aa8.39□□□□□ -1.07
SDF2-208ENST00000589788 MCFD2Q8NI22 146 aa8.39□□□□□ -1.07
SDF2-208ENST00000589788 ZNF596Q8TC21 504 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 148.6 ms