RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 GSTZ1O43708 216 aaPredicted RBP12.45□□□□□ -0.42
ATG4D-211ENST00000589753 RBBP9O75884 186 aa12.45□□□□□ -0.42
ATG4D-211ENST00000589753 MMP23AO75900 390 aa12.45□□□□□ -0.42
ATG4D-211ENST00000589753 FCER2P06734 321 aa12.45□□□□□ -0.42
ATG4D-211ENST00000589753 SCTP09683 121 aa12.45□□□□□ -0.42
ATG4D-211ENST00000589753 IGHV1-8P0DP01 117 aa12.45□□□□□ -0.42
ATG4D-211ENST00000589753 MMP9P14780 707 aa12.45□□□□□ -0.42
ATG4D-211ENST00000589753 FPR2P25090 351 aa12.45□□□□□ -0.42
ATG4D-211ENST00000589753 RCVRNP35243 200 aa12.45□□□□□ -0.42
ATG4D-211ENST00000589753 ERVFRD-1P60508 538 aa12.45□□□□□ -0.42
ATG4D-211ENST00000589753 VMO1Q7Z5L0 202 aa12.45□□□□□ -0.42
ATG4D-211ENST00000589753 C5orf24Q7Z6I8 188 aa12.45□□□□□ -0.42
ATG4D-211ENST00000589753 MFSD4AQ8N468 514 aa12.45□□□□□ -0.42
ATG4D-211ENST00000589753 OR10A7Q8NGE5 316 aa12.45□□□□□ -0.42
ATG4D-211ENST00000589753 OR4A4PQ8NGN8 299 aa12.45□□□□□ -0.42
ATG4D-211ENST00000589753 GALMQ96C23 342 aa12.45□□□□□ -0.42
ATG4D-211ENST00000589753 PCGF1Q9BSM1 259 aa12.45□□□□□ -0.42
ATG4D-211ENST00000589753 TMPRSS13Q9BYE2 586 aa12.45□□□□□ -0.42
ATG4D-211ENST00000589753 SRRQ9GZT4 340 aa12.45□□□□□ -0.42
ATG4D-211ENST00000589753 KLK11Q9UBX7 282 aa12.45□□□□□ -0.42
ATG4D-211ENST00000589753 MTFP1Q9UDX5 166 aa12.45□□□□□ -0.42
ATG4D-211ENST00000589753 ANXA10Q9UJ72 324 aa12.45□□□□□ -0.42
ATG4D-211ENST00000589753 ANAPC10Q9UM13 185 aa12.45□□□□□ -0.42
ATG4D-211ENST00000589753 SESN1Q9Y6P5 492 aa12.45□□□□□ -0.42
ATG4D-211ENST00000589753 F2RL2O00254 374 aa12.44□□□□□ -0.42
ATG4D-211ENST00000589753 SDCBPO00560 298 aaPredicted RBP12.44□□□□□ -0.42
ATG4D-211ENST00000589753 GSTT2P0CG29 244 aa12.44□□□□□ -0.42
ATG4D-211ENST00000589753 GSTT2BP0CG30 244 aa12.44□□□□□ -0.42
ATG4D-211ENST00000589753 NAT1P18440 290 aa12.44□□□□□ -0.42
ATG4D-211ENST00000589753 PRTN3P24158 256 aa12.44□□□□□ -0.42
ATG4D-211ENST00000589753 GDNFP39905 211 aa12.44□□□□□ -0.42
ATG4D-211ENST00000589753 ACTBP60709 375 aa12.44□□□□□ -0.42
ATG4D-211ENST00000589753 ACTG1P63261 375 aa12.44□□□□□ -0.42
ATG4D-211ENST00000589753 SSBP1Q04837 148 aaKnown RBP12.44□□□□□ -0.42
ATG4D-211ENST00000589753 LTC4SQ16873 150 aa12.44□□□□□ -0.42
ATG4D-211ENST00000589753 TMEM30BQ3MIR4 351 aa12.44□□□□□ -0.42
ATG4D-211ENST00000589753 OR52W1Q6IF63 320 aa12.44□□□□□ -0.42
ATG4D-211ENST00000589753 ZNF782Q6ZMW2 699 aaPredicted RBP12.44□□□□□ -0.42
ATG4D-211ENST00000589753 Q8N402 240 aa12.44□□□□□ -0.42
ATG4D-211ENST00000589753 GDPD1Q8N9F7 314 aa12.44□□□□□ -0.42
ATG4D-211ENST00000589753 IL1F10Q8WWZ1 152 aa12.44□□□□□ -0.42
ATG4D-211ENST00000589753 SNAPC3Q92966 411 aa12.44□□□□□ -0.42
ATG4D-211ENST00000589753 KIRREL1Q96J84 757 aa12.44□□□□□ -0.42
ATG4D-211ENST00000589753 SIRT7Q9NRC8 400 aa12.44□□□□□ -0.42
ATG4D-211ENST00000589753 NFYBP25208 207 aa12.43□□□□□ -0.42
ATG4D-211ENST00000589753 ARPC4P59998 168 aa12.43□□□□□ -0.42
ATG4D-211ENST00000589753 HTD2P86397 168 aa12.43□□□□□ -0.42
ATG4D-211ENST00000589753 CHRFAM7AQ494W8 412 aa12.43□□□□□ -0.42
ATG4D-211ENST00000589753 OR52M1Q8NGK5 317 aa12.43□□□□□ -0.42
ATG4D-211ENST00000589753 TBX15Q96SF7 602 aa12.43□□□□□ -0.42
ATG4D-211ENST00000589753 SMR3AQ99954 134 aa12.43□□□□□ -0.42
ATG4D-211ENST00000589753 THAP7Q9BT49 309 aaPredicted RBP12.43□□□□□ -0.42
ATG4D-211ENST00000589753 SUCNR1Q9BXA5 334 aa12.43□□□□□ -0.42
ATG4D-211ENST00000589753 UNKLQ9H9P5 680 aaKnown RBP12.43□□□□□ -0.42
ATG4D-211ENST00000589753 OR2S2Q9NQN1 319 aa12.43□□□□□ -0.42
ATG4D-211ENST00000589753 YAE1D1Q9NRH1 226 aa12.43□□□□□ -0.42
ATG4D-211ENST00000589753 GNG12Q9UBI6 72 aa12.43□□□□□ -0.42
ATG4D-211ENST00000589753 MAP1AP78559 2803 aaPredicted RBP12.43□□□□□ -0.42
ATG4D-211ENST00000589753 IGHV3-43A0A0B4J1X8 118 aa12.42□□□□□ -0.42
ATG4D-211ENST00000589753 IGKV1-6A0A0C4DH72 117 aa12.42□□□□□ -0.42
ATG4D-211ENST00000589753 DIRAS3O95661 229 aa12.42□□□□□ -0.42
ATG4D-211ENST00000589753 LY6G6DO95868 133 aa12.42□□□□□ -0.42
ATG4D-211ENST00000589753 AVPP01185 164 aa12.42□□□□□ -0.42
ATG4D-211ENST00000589753 IGHV3-43DP0DP04 118 aa12.42□□□□□ -0.42
ATG4D-211ENST00000589753 DLX1P56177 255 aa12.42□□□□□ -0.42
ATG4D-211ENST00000589753 LOXL3P58215 753 aa12.42□□□□□ -0.42
ATG4D-211ENST00000589753 LSAMPQ13449 338 aa12.42□□□□□ -0.42
ATG4D-211ENST00000589753 ZNF846Q147U1 533 aa12.42□□□□□ -0.42
ATG4D-211ENST00000589753 HERPUD1Q15011 391 aa12.42□□□□□ -0.42
ATG4D-211ENST00000589753 IGSF11Q5DX21 431 aa12.42□□□□□ -0.42
ATG4D-211ENST00000589753 STEAP3Q658P3 488 aa12.42□□□□□ -0.42
ATG4D-211ENST00000589753 NCR3LG1Q68D85 454 aa12.42□□□□□ -0.42
ATG4D-211ENST00000589753 LURAP1LQ8IV03 231 aa12.42□□□□□ -0.42
ATG4D-211ENST00000589753 OR5AP2Q8NGF4 316 aa12.42□□□□□ -0.42
ATG4D-211ENST00000589753 OR52L2PQ8NGH6 319 aa12.42□□□□□ -0.42
ATG4D-211ENST00000589753 TNFRSF14Q92956 283 aa12.42□□□□□ -0.42
ATG4D-211ENST00000589753 UPRTQ96BW1 309 aa12.42□□□□□ -0.42
ATG4D-211ENST00000589753 CABLES2Q9BTV7 478 aa12.42□□□□□ -0.42
ATG4D-211ENST00000589753 WDR12Q9GZL7 423 aaKnown RBP12.42□□□□□ -0.42
ATG4D-211ENST00000589753 TMEM133Q9H2Q1 129 aa12.42□□□□□ -0.42
ATG4D-211ENST00000589753 HEXA-AS1Q9H8Q6 139 aa12.42□□□□□ -0.42
ATG4D-211ENST00000589753 GFOD1Q9NXC2 390 aa12.42□□□□□ -0.42
ATG4D-211ENST00000589753 JPT1Q9UK76 154 aa12.42□□□□□ -0.42
ATG4D-211ENST00000589753 RBMX2Q9Y388 322 aaKnown RBP12.42□□□□□ -0.42
ATG4D-211ENST00000589753 MED13LQ71F56 2210 aa12.41□□□□□ -0.42
ATG4D-211ENST00000589753 A0A087X0M5 115 aa12.41□□□□□ -0.42
ATG4D-211ENST00000589753 A0A1B0GX30 115 aa12.41□□□□□ -0.42
ATG4D-211ENST00000589753 FAM172BPA6NC97 362 aa12.41□□□□□ -0.42
ATG4D-211ENST00000589753 A8MV72 311 aaPredicted RBP12.41□□□□□ -0.42
ATG4D-211ENST00000589753 BET1O15155 118 aa12.41□□□□□ -0.42
ATG4D-211ENST00000589753 HSPA12AO43301 675 aa12.41□□□□□ -0.42
ATG4D-211ENST00000589753 LANCL1O43813 399 aa12.41□□□□□ -0.42
ATG4D-211ENST00000589753 CSF1P09603 554 aa12.41□□□□□ -0.42
ATG4D-211ENST00000589753 CTXN2P0C2S0 81 aa12.41□□□□□ -0.42
ATG4D-211ENST00000589753 HOXB4P17483 251 aaPredicted RBP12.41□□□□□ -0.42
ATG4D-211ENST00000589753 ZBTB25P24278 435 aa12.41□□□□□ -0.42
ATG4D-211ENST00000589753 HLA-DMAP28067 261 aa12.41□□□□□ -0.42
ATG4D-211ENST00000589753 TAS2R46P59540 309 aa12.41□□□□□ -0.42
ATG4D-211ENST00000589753 PRB3Q04118 309 aaPredicted RBP12.41□□□□□ -0.42
ATG4D-211ENST00000589753 CLEC9AQ6UXN8 241 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms