RNA–Protein interactions for RNA: ENST00000588323.1

VPS4B-203, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 3

Gene VPS4B, Length 463 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-203ENST00000588323 FAM32AQ9Y421 112 aaKnown RBP2.06□□□□□ -2.08
VPS4B-203ENST00000588323 USP9YO00507 2555 aaPredicted RBP2.06□□□□□ -2.08
VPS4B-203ENST00000588323 IGSF9BQ9UPX0 1349 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 DOPEY2Q9Y3R5 2298 aa2.06□□□□□ -2.08
VPS4B-203ENST00000588323 FOCADQ5VW36 1801 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 RELNP78509 3460 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 PCNX1Q96RV3 2341 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 SMIM26A0A096LP01 95 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 A0A1B0GV72 72 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 SPAARA0A1B0GVQ0 90 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 SLC5A10A0PJK1 596 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 TMEM213A2RRL7 107 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 TMEM238C9JI98 176 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 ATP6V1G2-DDX39BF2Z307 99 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 CLDN34H7C241 214 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 M0QZ92 97 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 SULT1C2O00338 296 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 ZNF593O00488 134 aaPredicted RBP2.05□□□□□ -2.08
VPS4B-203ENST00000588323 LAD1O00515 517 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 BET1O15155 118 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 SLC16A4O15374 487 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 RAD1O60671 282 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 GABARAPO95166 117 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 INSP01308 110 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 IFNA21P01568 189 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 IGLV2-23P01705 113 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 CTSLP07711 333 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 TFPTP0C1Z6 253 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 COX5BP10606 129 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 SLC2A1P11166 492 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 NQO1P15559 274 aaKnown RBP2.05□□□□□ -2.08
VPS4B-203ENST00000588323 ME2P23368 584 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 OMGP23515 440 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 HTR1DP28221 377 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 CAPZBP47756 277 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 NMUP48645 174 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 NDUFA8P51970 172 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 OR12D2P58182 307 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 MTPNP58546 118 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 ESRRGP62508 458 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 RAB31Q13636 194 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 OR1Q1Q15612 314 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 BSXQ3C1V8 233 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 COX19Q49B96 90 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 ORMDL2Q53FV1 153 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 KLHL12Q53G59 568 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 ACTBL2Q562R1 376 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 FAM92BQ6ZTR7 304 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 SSX7Q7RTT5 188 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 TRAPPC5Q8IUR0 188 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 ZNF561Q8N587 486 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 LRRC52Q8N7C0 313 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 OR5M1Q8NGP8 315 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 ZFAND1Q8TCF1 268 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 DYNC2LI1Q8TCX1 351 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 RXFP2Q8WXD0 754 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 TCEAL3Q969E4 200 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 VAT1Q99536 393 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 TEAD3Q99594 435 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 PDCD1LG2Q9BQ51 273 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 AIF1LQ9BQI0 150 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 TMED9Q9BVK6 235 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 TIPINQ9BVW5 301 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 KIFC1Q9BW19 673 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 ZNF717Q9BY31 904 aaPredicted RBP2.05□□□□□ -2.08
VPS4B-203ENST00000588323 ING2Q9H160 280 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 TRABDQ9H4I3 376 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 ZSCAN16Q9H4T2 348 aaPredicted RBP2.05□□□□□ -2.08
VPS4B-203ENST00000588323 TMEM27Q9HBJ8 222 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 IFT46Q9NQC8 304 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 MMP26Q9NRE1 261 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 HEBP1Q9NRV9 189 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 TAS2R1Q9NYW7 299 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 SIGLEC9Q9Y336 463 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 PLIN4Q96Q06 1357 aa2.05□□□□□ -2.08
VPS4B-203ENST00000588323 SETD2Q9BYW2 2564 aaPredicted RBP2.04□□□□□ -2.08
VPS4B-203ENST00000588323 IGHV3-74A0A0B4J1X5 117 aa2.04□□□□□ -2.08
VPS4B-203ENST00000588323 TRAV8-4A0A0B4J246 113 aa2.04□□□□□ -2.08
VPS4B-203ENST00000588323 IGHV1-69DA0A0B4J2H0 117 aa2.04□□□□□ -2.08
VPS4B-203ENST00000588323 A0A1W2PQL4 384 aaPredicted RBP2.04□□□□□ -2.08
VPS4B-203ENST00000588323 ISPDA4D126 451 aa2.04□□□□□ -2.08
VPS4B-203ENST00000588323 M0QZK8 103 aa2.04□□□□□ -2.08
VPS4B-203ENST00000588323 PSMD12O00232 456 aaPredicted RBP2.04□□□□□ -2.08
VPS4B-203ENST00000588323 TCAPO15273 167 aa2.04□□□□□ -2.08
VPS4B-203ENST00000588323 AQP9O43315 295 aa2.04□□□□□ -2.08
VPS4B-203ENST00000588323 TRAF3IP2O43734 574 aaPredicted RBP2.04□□□□□ -2.08
VPS4B-203ENST00000588323 CD5LO43866 347 aa2.04□□□□□ -2.08
VPS4B-203ENST00000588323 GATBO75879 557 aaKnown RBP2.04□□□□□ -2.08
VPS4B-203ENST00000588323 ABCB11O95342 1321 aa2.04□□□□□ -2.08
VPS4B-203ENST00000588323 SERPINA1P01009 418 aa2.04□□□□□ -2.08
VPS4B-203ENST00000588323 IFNA5P01569 189 aa2.04□□□□□ -2.08
VPS4B-203ENST00000588323 CD8AP01732 235 aa2.04□□□□□ -2.08
VPS4B-203ENST00000588323 P01737 135 aa2.04□□□□□ -2.08
VPS4B-203ENST00000588323 HLA-DPB1P04440 258 aa2.04□□□□□ -2.08
VPS4B-203ENST00000588323 IGHV4-34P06331 123 aa2.04□□□□□ -2.08
VPS4B-203ENST00000588323 FAM228BP0C875 321 aa2.04□□□□□ -2.08
VPS4B-203ENST00000588323 HLA-GP17693 338 aa2.04□□□□□ -2.08
VPS4B-203ENST00000588323 RCC1P18754 421 aaPredicted RBP2.04□□□□□ -2.08
VPS4B-203ENST00000588323 TCN2P20062 427 aa2.04□□□□□ -2.08
VPS4B-203ENST00000588323 CRABP1P29762 137 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms