RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 HMGN3Q15651 99 aa8.74□□□□□ -1.01
SMARCA4-213ENST00000587988 CNPY1Q3B7I2 92 aa8.74□□□□□ -1.01
SMARCA4-213ENST00000587988 C6orf183Q5T699 404 aa8.74□□□□□ -1.01
SMARCA4-213ENST00000587988 RUSC1-AS1Q66K80 236 aa8.74□□□□□ -1.01
SMARCA4-213ENST00000587988 SNX29P2Q8IUI4 249 aa8.74□□□□□ -1.01
SMARCA4-213ENST00000587988 NANPQ8TBE9 248 aa8.74□□□□□ -1.01
SMARCA4-213ENST00000587988 DIRAS2Q96HU8 199 aa8.74□□□□□ -1.01
SMARCA4-213ENST00000587988 KIRREL1Q96J84 757 aa8.74□□□□□ -1.01
SMARCA4-213ENST00000587988 SUCNR1Q9BXA5 334 aa8.74□□□□□ -1.01
SMARCA4-213ENST00000587988 MMP27Q9H306 513 aa8.74□□□□□ -1.01
SMARCA4-213ENST00000587988 KCNIP1Q9NZI2 227 aa8.74□□□□□ -1.01
SMARCA4-213ENST00000587988 A3GALT2U3KPV4 340 aa8.74□□□□□ -1.01
SMARCA4-213ENST00000587988 hCG_1809904A0A1W2PP81 198 aa8.73□□□□□ -1.01
SMARCA4-213ENST00000587988 A0A1W2PPE2 198 aa8.73□□□□□ -1.01
SMARCA4-213ENST00000587988 A0A1W2PR64 198 aa8.73□□□□□ -1.01
SMARCA4-213ENST00000587988 A0A1W2PRV1 198 aa8.73□□□□□ -1.01
SMARCA4-213ENST00000587988 F2RL2O00254 374 aa8.73□□□□□ -1.01
SMARCA4-213ENST00000587988 IGHV3-7P01780 117 aa8.73□□□□□ -1.01
SMARCA4-213ENST00000587988 FCER2P06734 321 aa8.73□□□□□ -1.01
SMARCA4-213ENST00000587988 SCTP09683 121 aa8.73□□□□□ -1.01
SMARCA4-213ENST00000587988 GSTT2P0CG29 244 aa8.73□□□□□ -1.01
SMARCA4-213ENST00000587988 GSTT2BP0CG30 244 aa8.73□□□□□ -1.01
SMARCA4-213ENST00000587988 NFYBP25208 207 aa8.73□□□□□ -1.01
SMARCA4-213ENST00000587988 TALDO1P37837 337 aa8.73□□□□□ -1.01
SMARCA4-213ENST00000587988 LOXL3P58215 753 aa8.73□□□□□ -1.01
SMARCA4-213ENST00000587988 HLA-DRB3P79483 266 aa8.73□□□□□ -1.01
SMARCA4-213ENST00000587988 PITPNAQ00169 270 aa8.73□□□□□ -1.01
SMARCA4-213ENST00000587988 TRAT1Q6PIZ9 186 aa8.73□□□□□ -1.01
SMARCA4-213ENST00000587988 BRD3OSQ6XYD6 125 aa8.73□□□□□ -1.01
SMARCA4-213ENST00000587988 GVQW1Q8N7I0 195 aa8.73□□□□□ -1.01
SMARCA4-213ENST00000587988 LEAP2Q969E1 77 aa8.73□□□□□ -1.01
SMARCA4-213ENST00000587988 ABHD1Q96SE0 405 aa8.73□□□□□ -1.01
SMARCA4-213ENST00000587988 ST6GALNAC5Q9BVH7 336 aa8.73□□□□□ -1.01
SMARCA4-213ENST00000587988 BEX2Q9BXY8 128 aa8.73□□□□□ -1.01
SMARCA4-213ENST00000587988 TMEM133Q9H2Q1 129 aa8.73□□□□□ -1.01
SMARCA4-213ENST00000587988 HEXA-AS1Q9H8Q6 139 aa8.73□□□□□ -1.01
SMARCA4-213ENST00000587988 ZNF286AQ9HBT8 521 aa8.73□□□□□ -1.01
SMARCA4-213ENST00000587988 ADAM30Q9UKF2 790 aa8.73□□□□□ -1.01
SMARCA4-213ENST00000587988 SONP18583 2426 aaKnown RBP8.73□□□□□ -1.01
SMARCA4-213ENST00000587988 HIVEP2P31629 2446 aa8.72□□□□□ -1.01
SMARCA4-213ENST00000587988 A0A087X0M5 115 aa8.72□□□□□ -1.01
SMARCA4-213ENST00000587988 IGHV2-26A0A0B4J1V2 119 aa8.72□□□□□ -1.01
SMARCA4-213ENST00000587988 IGHV1-69DA0A0B4J2H0 117 aa8.72□□□□□ -1.01
SMARCA4-213ENST00000587988 IGKV1-6A0A0C4DH72 117 aa8.72□□□□□ -1.01
SMARCA4-213ENST00000587988 A0A1B0GX30 115 aa8.72□□□□□ -1.01
SMARCA4-213ENST00000587988 POM121CA8CG34 1229 aa8.72□□□□□ -1.01
SMARCA4-213ENST00000587988 TRDCB7Z8K6 153 aa8.72□□□□□ -1.01
SMARCA4-213ENST00000587988 SDCBPO00560 298 aaPredicted RBP8.72□□□□□ -1.01
SMARCA4-213ENST00000587988 SPINT2O43291 252 aa8.72□□□□□ -1.01
SMARCA4-213ENST00000587988 IGHV1-69P01742 117 aa8.72□□□□□ -1.01
SMARCA4-213ENST00000587988 DTYMKP23919 212 aa8.72□□□□□ -1.01
SMARCA4-213ENST00000587988 FPR2P25090 351 aa8.72□□□□□ -1.01
SMARCA4-213ENST00000587988 SRP14P37108 136 aaKnown RBP8.72□□□□□ -1.01
SMARCA4-213ENST00000587988 GNMTQ14749 295 aa8.72□□□□□ -1.01
SMARCA4-213ENST00000587988 HERPUD1Q15011 391 aa8.72□□□□□ -1.01
SMARCA4-213ENST00000587988 RNASE12Q5GAN4 147 aaKnown RBP8.72□□□□□ -1.01
SMARCA4-213ENST00000587988 GPR157Q5UAW9 335 aa8.72□□□□□ -1.01
SMARCA4-213ENST00000587988 NCR3LG1Q68D85 454 aa8.72□□□□□ -1.01
SMARCA4-213ENST00000587988 OR52W1Q6IF63 320 aa8.72□□□□□ -1.01
SMARCA4-213ENST00000587988 MOB1BQ7L9L4 216 aa8.72□□□□□ -1.01
SMARCA4-213ENST00000587988 ZNF554Q86TJ5 538 aa8.72□□□□□ -1.01
SMARCA4-213ENST00000587988 BCL6BQ8N143 479 aaPredicted RBP8.72□□□□□ -1.01
SMARCA4-213ENST00000587988 ABHD12Q8N2K0 398 aa8.72□□□□□ -1.01
SMARCA4-213ENST00000587988 PIP4P2Q8N4L2 257 aa8.72□□□□□ -1.01
SMARCA4-213ENST00000587988 OR10A7Q8NGE5 316 aa8.72□□□□□ -1.01
SMARCA4-213ENST00000587988 OR52L2PQ8NGH6 319 aa8.72□□□□□ -1.01
SMARCA4-213ENST00000587988 OR10V1Q8NGI7 309 aa8.72□□□□□ -1.01
SMARCA4-213ENST00000587988 OR6Q1Q8NGQ2 317 aa8.72□□□□□ -1.01
SMARCA4-213ENST00000587988 OR13D1Q8NGV5 346 aa8.72□□□□□ -1.01
SMARCA4-213ENST00000587988 C22orf15Q8WYQ4 148 aa8.72□□□□□ -1.01
SMARCA4-213ENST00000587988 SOSTQ9BQB4 213 aa8.72□□□□□ -1.01
SMARCA4-213ENST00000587988 OCSTAMPQ9BR26 566 aa8.72□□□□□ -1.01
SMARCA4-213ENST00000587988 GFOD1Q9NXC2 390 aa8.72□□□□□ -1.01
SMARCA4-213ENST00000587988 ZNRD1Q9P1U0 126 aa8.72□□□□□ -1.01
SMARCA4-213ENST00000587988 ZNF69Q9UC07 566 aa8.72□□□□□ -1.01
SMARCA4-213ENST00000587988 CDC42EP3Q9UKI2 254 aa8.72□□□□□ -1.01
SMARCA4-213ENST00000587988 NUP50Q9UKX7 468 aa8.72□□□□□ -1.01
SMARCA4-213ENST00000587988 FN1P02751 2386 aaKnown RBP8.71□□□□□ -1.01
SMARCA4-213ENST00000587988 A0A1W2PPE3 182 aa8.71□□□□□ -1.02
SMARCA4-213ENST00000587988 FABP7O15540 132 aa8.71□□□□□ -1.02
SMARCA4-213ENST00000587988 CRLF1O75462 422 aa8.71□□□□□ -1.02
SMARCA4-213ENST00000587988 ARG1P05089 322 aa8.71□□□□□ -1.02
SMARCA4-213ENST00000587988 HNF1AP20823 631 aa8.71□□□□□ -1.02
SMARCA4-213ENST00000587988 CD34P28906 385 aa8.71□□□□□ -1.02
SMARCA4-213ENST00000587988 S100A5P33763 92 aa8.71□□□□□ -1.02
SMARCA4-213ENST00000587988 PRSS3P35030 304 aa8.71□□□□□ -1.02
SMARCA4-213ENST00000587988 UBE2E1P51965 193 aa8.71□□□□□ -1.02
SMARCA4-213ENST00000587988 IL18Q14116 193 aa8.71□□□□□ -1.02
SMARCA4-213ENST00000587988 SRSF7Q16629 238 aaKnown RBP eCLIP8.71□□□□□ -1.02
SMARCA4-213ENST00000587988 CHRFAM7AQ494W8 412 aa8.71□□□□□ -1.02
SMARCA4-213ENST00000587988 IGSF11Q5DX21 431 aa8.71□□□□□ -1.02
SMARCA4-213ENST00000587988 LDLRAD2Q5SZI1 272 aa8.71□□□□□ -1.02
SMARCA4-213ENST00000587988 Q6ZS49 121 aa8.71□□□□□ -1.02
SMARCA4-213ENST00000587988 LURAP1LQ8IV03 231 aa8.71□□□□□ -1.02
SMARCA4-213ENST00000587988 OR11H6Q8NGC7 330 aa8.71□□□□□ -1.02
SMARCA4-213ENST00000587988 OR52M1Q8NGK5 317 aa8.71□□□□□ -1.02
SMARCA4-213ENST00000587988 GPX8Q8TED1 209 aa8.71□□□□□ -1.02
SMARCA4-213ENST00000587988 C17orf50Q8WW18 174 aa8.71□□□□□ -1.02
SMARCA4-213ENST00000587988 IL1F10Q8WWZ1 152 aa8.71□□□□□ -1.02
SMARCA4-213ENST00000587988 GALMQ96C23 342 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms