RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 ZNF660Q6AZW8 331 aaPredicted RBP12.32□□□□□ -0.44
NFIX-208ENST00000587260 DHRS11Q6UWP2 260 aa12.32□□□□□ -0.44
NFIX-208ENST00000587260 ZNF782Q6ZMW2 699 aaPredicted RBP12.32□□□□□ -0.44
NFIX-208ENST00000587260 BTN2A1Q7KYR7 527 aa12.32□□□□□ -0.44
NFIX-208ENST00000587260 CENPSQ8N2Z9 138 aa12.32□□□□□ -0.44
NFIX-208ENST00000587260 OR51S1Q8NGJ8 323 aa12.32□□□□□ -0.44
NFIX-208ENST00000587260 OR13A1Q8NGR1 328 aa12.32□□□□□ -0.44
NFIX-208ENST00000587260 PRRT1Q99946 306 aa12.32□□□□□ -0.44
NFIX-208ENST00000587260 CABLES2Q9BTV7 478 aa12.32□□□□□ -0.44
NFIX-208ENST00000587260 DPAGT1Q9H3H5 408 aa12.32□□□□□ -0.44
NFIX-208ENST00000587260 OCEL1Q9H607 264 aa12.32□□□□□ -0.44
NFIX-208ENST00000587260 LINC00574Q9H8X3 128 aa12.32□□□□□ -0.44
NFIX-208ENST00000587260 TAF9BQ9HBM6 251 aa12.32□□□□□ -0.44
NFIX-208ENST00000587260 C19orf12Q9NSK7 152 aa12.32□□□□□ -0.44
NFIX-208ENST00000587260 MCUBQ9NWR8 336 aa12.32□□□□□ -0.44
NFIX-208ENST00000587260 LPAR3Q9UBY5 353 aa12.32□□□□□ -0.44
NFIX-208ENST00000587260 SCP2D1Q9UJQ7 156 aa12.32□□□□□ -0.44
NFIX-208ENST00000587260 NOTCH2Q04721 2471 aa12.32□□□□□ -0.44
NFIX-208ENST00000587260 AKAP9Q99996 3911 aa12.32□□□□□ -0.44
NFIX-208ENST00000587260 IGKV1-6A0A0C4DH72 117 aa12.32□□□□□ -0.44
NFIX-208ENST00000587260 KIAA1324LA8MWY0 1029 aaPredicted RBP12.32□□□□□ -0.44
NFIX-208ENST00000587260 C12orf77C9JDV5 145 aa12.32□□□□□ -0.44
NFIX-208ENST00000587260 NPIPB11E5RHQ5 1161 aa12.32□□□□□ -0.44
NFIX-208ENST00000587260 C15orf65H3BRN8 121 aa12.32□□□□□ -0.44
NFIX-208ENST00000587260 OR5H8P0DN80 308 aa12.32□□□□□ -0.44
NFIX-208ENST00000587260 ZFP36P26651 326 aaKnown RBP12.32□□□□□ -0.44
NFIX-208ENST00000587260 GLP1RP43220 463 aa12.32□□□□□ -0.44
NFIX-208ENST00000587260 HERPUD1Q15011 391 aa12.32□□□□□ -0.44
NFIX-208ENST00000587260 TRIM16LQ309B1 348 aa12.32□□□□□ -0.44
NFIX-208ENST00000587260 IGSF11Q5DX21 431 aa12.32□□□□□ -0.44
NFIX-208ENST00000587260 FAM185AQ8N0U4 392 aa12.32□□□□□ -0.44
NFIX-208ENST00000587260 ENKURQ8TC29 256 aa12.32□□□□□ -0.44
NFIX-208ENST00000587260 GIMAP1Q8WWP7 306 aa12.32□□□□□ -0.44
NFIX-208ENST00000587260 DCTN5Q9BTE1 182 aa12.32□□□□□ -0.44
NFIX-208ENST00000587260 EHFQ9NZC4 300 aa12.32□□□□□ -0.44
NFIX-208ENST00000587260 LINC00312Q9Y6C7 94 aa12.32□□□□□ -0.44
NFIX-208ENST00000587260 ITPR3Q14573 2671 aa12.31□□□□□ -0.44
NFIX-208ENST00000587260 TRBV6-7A0A0A0MS04 114 aa12.31□□□□□ -0.44
NFIX-208ENST00000587260 TRBV23-1A0A0A0MS06 115 aa12.31□□□□□ -0.44
NFIX-208ENST00000587260 hADV38S2A0JD32 116 aa12.31□□□□□ -0.44
NFIX-208ENST00000587260 C22orf46C9J442 243 aa12.31□□□□□ -0.44
NFIX-208ENST00000587260 SDCBPO00560 298 aaPredicted RBP12.31□□□□□ -0.44
NFIX-208ENST00000587260 SMAD7O15105 426 aaKnown RBP12.31□□□□□ -0.44
NFIX-208ENST00000587260 CCR6P51684 374 aa12.31□□□□□ -0.44
NFIX-208ENST00000587260 RPL31P62899 125 aaKnown RBP12.31□□□□□ -0.44
NFIX-208ENST00000587260 LOXL1Q08397 574 aaPredicted RBP12.31□□□□□ -0.44
NFIX-208ENST00000587260 CCBE1Q6UXH8 406 aaPredicted RBP12.31□□□□□ -0.44
NFIX-208ENST00000587260 TCF23Q7RTU1 214 aa12.31□□□□□ -0.44
NFIX-208ENST00000587260 LHFPL1Q86WI0 220 aa12.31□□□□□ -0.44
NFIX-208ENST00000587260 TMEM17Q86X19 198 aa12.31□□□□□ -0.44
NFIX-208ENST00000587260 CIARTQ8N365 385 aaPredicted RBP12.31□□□□□ -0.44
NFIX-208ENST00000587260 TERB2Q8NHR7 220 aa12.31□□□□□ -0.44
NFIX-208ENST00000587260 MRGPRDQ8TDS7 321 aa12.31□□□□□ -0.44
NFIX-208ENST00000587260 SLC25A21Q9BQT8 299 aaPredicted RBP12.31□□□□□ -0.44
NFIX-208ENST00000587260 TOLLIPQ9H0E2 274 aa12.31□□□□□ -0.44
NFIX-208ENST00000587260 TAS2R3Q9NYW6 316 aa12.31□□□□□ -0.44
NFIX-208ENST00000587260 UBE2J1Q9Y385 318 aaPredicted RBP12.31□□□□□ -0.44
NFIX-208ENST00000587260 ARHGAP32A7KAX9 2087 aa12.3□□□□□ -0.44
NFIX-208ENST00000587260 TRGV10A0A0A0MS01 117 aa12.3□□□□□ -0.44
NFIX-208ENST00000587260 ZNF729A6NN14 1252 aaPredicted RBP12.3□□□□□ -0.44
NFIX-208ENST00000587260 NDUFB6O95139 128 aa12.3□□□□□ -0.44
NFIX-208ENST00000587260 TCRBP04435 133 aa12.3□□□□□ -0.44
NFIX-208ENST00000587260 SPNP16150 400 aa12.3□□□□□ -0.44
NFIX-208ENST00000587260 TSPAN5P62079 268 aa12.3□□□□□ -0.44
NFIX-208ENST00000587260 ZNF273Q14593 569 aa12.3□□□□□ -0.44
NFIX-208ENST00000587260 RBMS2Q15434 407 aaKnown RBP12.3□□□□□ -0.44
NFIX-208ENST00000587260 IDO2Q6ZQW0 420 aa12.3□□□□□ -0.44
NFIX-208ENST00000587260 OR13C8Q8NGS7 320 aa12.3□□□□□ -0.44
NFIX-208ENST00000587260 OR6F1Q8NGZ6 308 aa12.3□□□□□ -0.44
NFIX-208ENST00000587260 C8orf46Q8TAG6 207 aa12.3□□□□□ -0.44
NFIX-208ENST00000587260 GALMQ96C23 342 aa12.3□□□□□ -0.44
NFIX-208ENST00000587260 RAB9BQ9NP90 201 aa12.3□□□□□ -0.44
NFIX-208ENST00000587260 LOC105371242A0A075B767 164 aa12.29□□□□□ -0.44
NFIX-208ENST00000587260 KBTBD11-OT1A0A1B0GTJ5 212 aa12.29□□□□□ -0.44
NFIX-208ENST00000587260 A8MXK9 166 aa12.29□□□□□ -0.44
NFIX-208ENST00000587260 SPINT2O43291 252 aa12.29□□□□□ -0.44
NFIX-208ENST00000587260 HBZP02008 142 aa12.29□□□□□ -0.44
NFIX-208ENST00000587260 HTD2P86397 168 aa12.29□□□□□ -0.44
NFIX-208ENST00000587260 C17orf58Q2M2W7 97 aa12.29□□□□□ -0.44
NFIX-208ENST00000587260 PLET1Q6UQ28 207 aa12.29□□□□□ -0.44
NFIX-208ENST00000587260 Q6ZNX1 250 aa12.29□□□□□ -0.44
NFIX-208ENST00000587260 C5orf24Q7Z6I8 188 aa12.29□□□□□ -0.44
NFIX-208ENST00000587260 UBALD1Q8TB05 177 aa12.29□□□□□ -0.44
NFIX-208ENST00000587260 ARL11Q969Q4 196 aa12.29□□□□□ -0.44
NFIX-208ENST00000587260 CREB3L1Q96BA8 519 aa12.29□□□□□ -0.44
NFIX-208ENST00000587260 KIRREL1Q96J84 757 aa12.29□□□□□ -0.44
NFIX-208ENST00000587260 DMRTB1Q96MA1 342 aa12.29□□□□□ -0.44
NFIX-208ENST00000587260 MARVELD1Q9BSK0 173 aa12.29□□□□□ -0.44
NFIX-208ENST00000587260 RPUSD1Q9UJJ7 312 aaKnown RBP12.29□□□□□ -0.44
NFIX-208ENST00000587260 NUBP2Q9Y5Y2 271 aa12.29□□□□□ -0.44
NFIX-208ENST00000587260 YLPM1P49750 1951 aaKnown RBP12.29□□□□□ -0.44
NFIX-208ENST00000587260 MALRD1Q5VYJ5 2156 aa12.29□□□□□ -0.44
NFIX-208ENST00000587260 F2RL2O00254 374 aa12.28□□□□□ -0.44
NFIX-208ENST00000587260 FOXH1O75593 365 aa12.28□□□□□ -0.44
NFIX-208ENST00000587260 TUSC2O75896 110 aa12.28□□□□□ -0.44
NFIX-208ENST00000587260 CCL3L1P16619 93 aa12.28□□□□□ -0.44
NFIX-208ENST00000587260 SSTR5P35346 364 aa12.28□□□□□ -0.44
NFIX-208ENST00000587260 RAG2P55895 527 aa12.28□□□□□ -0.44
NFIX-208ENST00000587260 TMEM30BQ3MIR4 351 aa12.28□□□□□ -0.44
NFIX-208ENST00000587260 AADACL3Q5VUY0 350 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms