RNA–Protein interactions for RNA: ENST00000586863.5

ATG4D-206, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 4

Gene ATG4D, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-206ENST00000586863 OR2G6Q5TZ20 316 aa11.02□□□□□ -0.65
ATG4D-206ENST00000586863 FOXRED2Q8IWF2 684 aa11.02□□□□□ -0.65
ATG4D-206ENST00000586863 COMMD1Q8N668 190 aa11.02□□□□□ -0.65
ATG4D-206ENST00000586863 OR13C5Q8NGS8 318 aa11.02□□□□□ -0.65
ATG4D-206ENST00000586863 OR52N1Q8NH53 320 aa11.02□□□□□ -0.65
ATG4D-206ENST00000586863 CCDC107Q8WV48 283 aa11.02□□□□□ -0.65
ATG4D-206ENST00000586863 ARL11Q969Q4 196 aa11.02□□□□□ -0.65
ATG4D-206ENST00000586863 RBMXL1Q96E39 390 aaKnown RBP11.02□□□□□ -0.65
ATG4D-206ENST00000586863 METTL9Q9H1A3 318 aa11.02□□□□□ -0.65
ATG4D-206ENST00000586863 TMEM138Q9NPI0 162 aa11.02□□□□□ -0.65
ATG4D-206ENST00000586863 GFOD1Q9NXC2 390 aa11.02□□□□□ -0.65
ATG4D-206ENST00000586863 SIRT4Q9Y6E7 314 aaPredicted RBP11.02□□□□□ -0.65
ATG4D-206ENST00000586863 DYNC2H1Q8NCM8 4307 aaKnown RBP11.02□□□□□ -0.65
ATG4D-206ENST00000586863 IGHV3-43A0A0B4J1X8 118 aa11.01□□□□□ -0.65
ATG4D-206ENST00000586863 MAGEA13PA6NCF6 341 aa11.01□□□□□ -0.65
ATG4D-206ENST00000586863 SDCBPO00560 298 aaPredicted RBP11.01□□□□□ -0.65
ATG4D-206ENST00000586863 GAPDHP04406 335 aaKnown RBP11.01□□□□□ -0.65
ATG4D-206ENST00000586863 IGHV3-43DP0DP04 118 aa11.01□□□□□ -0.65
ATG4D-206ENST00000586863 SLC6A1P30531 599 aa11.01□□□□□ -0.65
ATG4D-206ENST00000586863 GPR12P47775 334 aa11.01□□□□□ -0.65
ATG4D-206ENST00000586863 PPP3R1P63098 170 aa11.01□□□□□ -0.65
ATG4D-206ENST00000586863 SLC35B1P78383 322 aa11.01□□□□□ -0.65
ATG4D-206ENST00000586863 CD69Q07108 199 aa11.01□□□□□ -0.65
ATG4D-206ENST00000586863 CCDC58Q4VC31 144 aa11.01□□□□□ -0.65
ATG4D-206ENST00000586863 LAIR2Q6ISS4 152 aa11.01□□□□□ -0.65
ATG4D-206ENST00000586863 RPL22L1Q6P5R6 122 aaKnown RBP11.01□□□□□ -0.65
ATG4D-206ENST00000586863 LCNL1Q6ZST4 164 aa11.01□□□□□ -0.65
ATG4D-206ENST00000586863 TGIF2LXQ8IUE1 241 aa11.01□□□□□ -0.65
ATG4D-206ENST00000586863 ZNF695Q8IW36 515 aa11.01□□□□□ -0.65
ATG4D-206ENST00000586863 LINC00311Q8N616 119 aa11.01□□□□□ -0.65
ATG4D-206ENST00000586863 Q8N9W7 124 aa11.01□□□□□ -0.65
ATG4D-206ENST00000586863 TMEM104Q8NE00 496 aa11.01□□□□□ -0.65
ATG4D-206ENST00000586863 RAX2Q96IS3 184 aa11.01□□□□□ -0.65
ATG4D-206ENST00000586863 B9D2Q9BPU9 175 aa11.01□□□□□ -0.65
ATG4D-206ENST00000586863 MCRIP2Q9BUT9 160 aaKnown RBP11.01□□□□□ -0.65
ATG4D-206ENST00000586863 ERGIC3Q9Y282 383 aa11.01□□□□□ -0.65
ATG4D-206ENST00000586863 NCBP2LA6PVI3 153 aaKnown RBP11□□□□□ -0.65
ATG4D-206ENST00000586863 ZNF736B4DX44 427 aaPredicted RBP11□□□□□ -0.65
ATG4D-206ENST00000586863 AP4M1O00189 453 aa11□□□□□ -0.65
ATG4D-206ENST00000586863 SLC31A2O15432 143 aa11□□□□□ -0.65
ATG4D-206ENST00000586863 LALBAP00709 142 aa11□□□□□ -0.65
ATG4D-206ENST00000586863 CSTBP04080 98 aaKnown RBP11□□□□□ -0.65
ATG4D-206ENST00000586863 RPLP1P05386 114 aaKnown RBP11□□□□□ -0.65
ATG4D-206ENST00000586863 GZMHP20718 246 aa11□□□□□ -0.65
ATG4D-206ENST00000586863 BDKRB2P30411 391 aa11□□□□□ -0.65
ATG4D-206ENST00000586863 MPV17LQ2QL34 196 aa11□□□□□ -0.65
ATG4D-206ENST00000586863 DEFB136Q30KP8 78 aa11□□□□□ -0.65
ATG4D-206ENST00000586863 SLC22A6Q4U2R8 563 aa11□□□□□ -0.65
ATG4D-206ENST00000586863 ATAD3CQ5T2N8 411 aa11□□□□□ -0.65
ATG4D-206ENST00000586863 ZNF497Q6ZNH5 498 aa11□□□□□ -0.65
ATG4D-206ENST00000586863 LINC00596Q86U02 117 aa11□□□□□ -0.65
ATG4D-206ENST00000586863 OR52M1Q8NGK5 317 aa11□□□□□ -0.65
ATG4D-206ENST00000586863 OR2T10Q8NGZ9 312 aa11□□□□□ -0.65
ATG4D-206ENST00000586863 NEK7Q8TDX7 302 aa11□□□□□ -0.65
ATG4D-206ENST00000586863 RTN4IP1Q8WWV3 396 aaPredicted RBP11□□□□□ -0.65
ATG4D-206ENST00000586863 ST6GALNAC6Q969X2 333 aa11□□□□□ -0.65
ATG4D-206ENST00000586863 SMIM19Q96E16 107 aa11□□□□□ -0.65
ATG4D-206ENST00000586863 ABCG5Q9H222 651 aa11□□□□□ -0.65
ATG4D-206ENST00000586863 PLSCR3Q9NRY6 295 aa11□□□□□ -0.65
ATG4D-206ENST00000586863 LIN7CQ9NUP9 197 aaKnown RBP11□□□□□ -0.65
ATG4D-206ENST00000586863 BABAM2Q9NXR7 383 aa11□□□□□ -0.65
ATG4D-206ENST00000586863 CLEC2DQ9UHP7 191 aa11□□□□□ -0.65
ATG4D-206ENST00000586863 BLOC1S6Q9UL45 172 aa11□□□□□ -0.65
ATG4D-206ENST00000586863 CCL24O00175 119 aa10.99□□□□□ -0.65
ATG4D-206ENST00000586863 MT-ND4P03905 459 aa10.99□□□□□ -0.65
ATG4D-206ENST00000586863 CDK1P06493 297 aa10.99□□□□□ -0.65
ATG4D-206ENST00000586863 IGFBP3P17936 291 aaPredicted RBP10.99□□□□□ -0.65
ATG4D-206ENST00000586863 RAB25P57735 213 aa10.99□□□□□ -0.65
ATG4D-206ENST00000586863 TAS2R43P59537 309 aa10.99□□□□□ -0.65
ATG4D-206ENST00000586863 RBM48Q5RL73 367 aaKnown RBP10.99□□□□□ -0.65
ATG4D-206ENST00000586863 TEX38Q6PEX7 206 aa10.99□□□□□ -0.65
ATG4D-206ENST00000586863 C8orf31Q8N9H6 132 aa10.99□□□□□ -0.65
ATG4D-206ENST00000586863 CYYR1Q96J86 154 aa10.99□□□□□ -0.65
ATG4D-206ENST00000586863 S100A13Q99584 98 aa10.99□□□□□ -0.65
ATG4D-206ENST00000586863 MND1Q9BWT6 205 aa10.99□□□□□ -0.65
ATG4D-206ENST00000586863 FKBP14Q9NWM8 211 aa10.99□□□□□ -0.65
ATG4D-206ENST00000586863 PAK1IP1Q9NWT1 392 aaPredicted RBP10.99□□□□□ -0.65
ATG4D-206ENST00000586863 TRAV8-7A0A075B6U6 113 aa10.98□□□□□ -0.65
ATG4D-206ENST00000586863 TRBV5-5A0A0J9YX44 114 aa10.98□□□□□ -0.65
ATG4D-206ENST00000586863 C12orf77C9JDV5 145 aa10.98□□□□□ -0.65
ATG4D-206ENST00000586863 AIPO00170 330 aa10.98□□□□□ -0.65
ATG4D-206ENST00000586863 OGG1O15527 345 aa10.98□□□□□ -0.65
ATG4D-206ENST00000586863 RGS10O43665 173 aa10.98□□□□□ -0.65
ATG4D-206ENST00000586863 ORC5O43913 435 aa10.98□□□□□ -0.65
ATG4D-206ENST00000586863 ZNF780AO75290 641 aaPredicted RBP10.98□□□□□ -0.65
ATG4D-206ENST00000586863 GTF2F2P13984 249 aa10.98□□□□□ -0.65
ATG4D-206ENST00000586863 IL3RAP26951 378 aa10.98□□□□□ -0.65
ATG4D-206ENST00000586863 LUMP51884 338 aaPredicted RBP10.98□□□□□ -0.65
ATG4D-206ENST00000586863 WNT4P56705 351 aa10.98□□□□□ -0.65
ATG4D-206ENST00000586863 PNLIPRP3Q17RR3 467 aa10.98□□□□□ -0.65
ATG4D-206ENST00000586863 ZFP41Q8N8Y5 198 aa10.98□□□□□ -0.65
ATG4D-206ENST00000586863 ZNF439Q8NDP4 499 aa10.98□□□□□ -0.65
ATG4D-206ENST00000586863 OR10V1Q8NGI7 309 aa10.98□□□□□ -0.65
ATG4D-206ENST00000586863 S1PR3Q99500 378 aa10.98□□□□□ -0.65
ATG4D-206ENST00000586863 HSPB9Q9BQS6 159 aa10.98□□□□□ -0.65
ATG4D-206ENST00000586863 CCDC90BQ9GZT6 254 aa10.98□□□□□ -0.65
ATG4D-206ENST00000586863 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.98□□□□□ -0.65
ATG4D-206ENST00000586863 RCC2Q9P258 522 aaKnown RBP10.98□□□□□ -0.65
ATG4D-206ENST00000586863 SACSQ9NZJ4 4579 aa10.98□□□□□ -0.65
ATG4D-206ENST00000586863 DENRO43583 198 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms