RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 KCTD7Q96MP8 289 aa11.27□□□□□ -0.61
SDF2-202ENST00000585428 JAM3Q9BX67 310 aa11.27□□□□□ -0.61
SDF2-202ENST00000585428 METTL9Q9H1A3 318 aa11.27□□□□□ -0.61
SDF2-202ENST00000585428 MRPS18AQ9NVS2 196 aaKnown RBP11.27□□□□□ -0.61
SDF2-202ENST00000585428 TAS2R4Q9NYW5 299 aa11.27□□□□□ -0.61
SDF2-202ENST00000585428 SLC31A2O15432 143 aa11.26□□□□□ -0.61
SDF2-202ENST00000585428 FADS2O95864 444 aaKnown RBP11.26□□□□□ -0.61
SDF2-202ENST00000585428 VDAC1P21796 283 aa11.26□□□□□ -0.61
SDF2-202ENST00000585428 SOX2P48431 317 aa11.26□□□□□ -0.61
SDF2-202ENST00000585428 GTF2A1P52655 376 aaPredicted RBP11.26□□□□□ -0.61
SDF2-202ENST00000585428 RUNX1Q01196 453 aa11.26□□□□□ -0.61
SDF2-202ENST00000585428 STEAP3Q658P3 488 aa11.26□□□□□ -0.61
SDF2-202ENST00000585428 LINC00596Q86U02 117 aa11.26□□□□□ -0.61
SDF2-202ENST00000585428 SBSPONQ8IVN8 264 aa11.26□□□□□ -0.61
SDF2-202ENST00000585428 ZNF491Q8N8L2 437 aa11.26□□□□□ -0.61
SDF2-202ENST00000585428 UBALD1Q8TB05 177 aa11.26□□□□□ -0.61
SDF2-202ENST00000585428 TSEN15Q8WW01 171 aaKnown RBP11.26□□□□□ -0.61
SDF2-202ENST00000585428 KLK15Q9H2R5 256 aa11.26□□□□□ -0.61
SDF2-202ENST00000585428 AMBNQ9NP70 447 aa11.26□□□□□ -0.61
SDF2-202ENST00000585428 TMEM138Q9NPI0 162 aa11.26□□□□□ -0.61
SDF2-202ENST00000585428 PLA2G2EQ9NZK7 142 aa11.26□□□□□ -0.61
SDF2-202ENST00000585428 SMAD5-AS1Q9Y6J3 95 aa11.26□□□□□ -0.61
SDF2-202ENST00000585428 IGHV3-43A0A0B4J1X8 118 aa11.25□□□□□ -0.61
SDF2-202ENST00000585428 FAM90A10PA6NDY2 464 aa11.25□□□□□ -0.61
SDF2-202ENST00000585428 EI24O14681 340 aa11.25□□□□□ -0.61
SDF2-202ENST00000585428 IGLV1-40P01703 118 aa11.25□□□□□ -0.61
SDF2-202ENST00000585428 CSTBP04080 98 aaKnown RBP11.25□□□□□ -0.61
SDF2-202ENST00000585428 IGHV3-43DP0DP04 118 aa11.25□□□□□ -0.61
SDF2-202ENST00000585428 IL3RAP26951 378 aa11.25□□□□□ -0.61
SDF2-202ENST00000585428 ZNF93P35789 620 aaPredicted RBP11.25□□□□□ -0.61
SDF2-202ENST00000585428 RASSF2P50749 326 aa11.25□□□□□ -0.61
SDF2-202ENST00000585428 ALDH3A2P51648 485 aa11.25□□□□□ -0.61
SDF2-202ENST00000585428 RAB40BQ12829 278 aa11.25□□□□□ -0.61
SDF2-202ENST00000585428 MPV17LQ2QL34 196 aa11.25□□□□□ -0.61
SDF2-202ENST00000585428 ASPHD1Q5U4P2 390 aa11.25□□□□□ -0.61
SDF2-202ENST00000585428 OR1N2Q8NGR9 330 aa11.25□□□□□ -0.61
SDF2-202ENST00000585428 MUC7Q8TAX7 377 aa11.25□□□□□ -0.61
SDF2-202ENST00000585428 GPR148Q8TDV2 347 aa11.25□□□□□ -0.61
SDF2-202ENST00000585428 FAM192AQ9GZU8 254 aa11.25□□□□□ -0.61
SDF2-202ENST00000585428 ORC6Q9Y5N6 252 aa11.25□□□□□ -0.61
SDF2-202ENST00000585428 C12orf77C9JDV5 145 aa11.24□□□□□ -0.61
SDF2-202ENST00000585428 TXNL1O43396 289 aa11.24□□□□□ -0.61
SDF2-202ENST00000585428 ZNF780AO75290 641 aaPredicted RBP11.24□□□□□ -0.61
SDF2-202ENST00000585428 LIMS3P0CW19 117 aa11.24□□□□□ -0.61
SDF2-202ENST00000585428 LIMS4P0CW20 117 aa11.24□□□□□ -0.61
SDF2-202ENST00000585428 OR5H8P0DN80 308 aa11.24□□□□□ -0.61
SDF2-202ENST00000585428 CCDC58Q4VC31 144 aa11.24□□□□□ -0.61
SDF2-202ENST00000585428 ATAD3CQ5T2N8 411 aa11.24□□□□□ -0.61
SDF2-202ENST00000585428 XAF1Q6GPH4 301 aa11.24□□□□□ -0.61
SDF2-202ENST00000585428 RPL22L1Q6P5R6 122 aaKnown RBP11.24□□□□□ -0.61
SDF2-202ENST00000585428 GAPTQ8N292 157 aa11.24□□□□□ -0.61
SDF2-202ENST00000585428 OR52I1Q8NGK6 324 aa11.24□□□□□ -0.61
SDF2-202ENST00000585428 RITA1Q96K30 269 aa11.24□□□□□ -0.61
SDF2-202ENST00000585428 Q96MT0 163 aa11.24□□□□□ -0.61
SDF2-202ENST00000585428 GNB4Q9HAV0 340 aa11.24□□□□□ -0.61
SDF2-202ENST00000585428 PAK1IP1Q9NWT1 392 aaPredicted RBP11.24□□□□□ -0.61
SDF2-202ENST00000585428 GMPPBQ9Y5P6 360 aa11.24□□□□□ -0.61
SDF2-202ENST00000585428 G3V318 75 aa11.23□□□□□ -0.61
SDF2-202ENST00000585428 AIPO00170 330 aa11.23□□□□□ -0.61
SDF2-202ENST00000585428 LANCL1O43813 399 aa11.23□□□□□ -0.61
SDF2-202ENST00000585428 ATP5HO75947 161 aa11.23□□□□□ -0.61
SDF2-202ENST00000585428 OR8U8P0C7N1 319 aa11.23□□□□□ -0.61
SDF2-202ENST00000585428 GTF2F2P13984 249 aa11.23□□□□□ -0.61
SDF2-202ENST00000585428 RAB9AP51151 201 aa11.23□□□□□ -0.61
SDF2-202ENST00000585428 ZNF616Q08AN1 781 aa11.23□□□□□ -0.61
SDF2-202ENST00000585428 SYT6Q5T7P8 510 aaPredicted RBP11.23□□□□□ -0.61
SDF2-202ENST00000585428 TMEM65Q6PI78 240 aa11.23□□□□□ -0.61
SDF2-202ENST00000585428 ZNF429Q86V71 674 aa11.23□□□□□ -0.61
SDF2-202ENST00000585428 PYDC1Q8WXC3 89 aa11.23□□□□□ -0.61
SDF2-202ENST00000585428 TMEM106AQ96A25 262 aa11.23□□□□□ -0.61
SDF2-202ENST00000585428 ZNF107Q9UII5 783 aaPredicted RBP11.23□□□□□ -0.61
SDF2-202ENST00000585428 VSIG4Q9Y279 399 aa11.23□□□□□ -0.61
SDF2-202ENST00000585428 TENM2Q9NT68 2774 aa11.22□□□□□ -0.61
SDF2-202ENST00000585428 A0A1W2PP11 408 aa11.22□□□□□ -0.61
SDF2-202ENST00000585428 OGG1O15527 345 aa11.22□□□□□ -0.61
SDF2-202ENST00000585428 SPINT2O43291 252 aa11.22□□□□□ -0.61
SDF2-202ENST00000585428 GPX5O75715 221 aa11.22□□□□□ -0.61
SDF2-202ENST00000585428 CD2P06729 351 aa11.22□□□□□ -0.61
SDF2-202ENST00000585428 IGFBP3P17936 291 aaPredicted RBP11.22□□□□□ -0.61
SDF2-202ENST00000585428 SERPINA2P20848 420 aa11.22□□□□□ -0.61
SDF2-202ENST00000585428 BDKRB2P30411 391 aa11.22□□□□□ -0.61
SDF2-202ENST00000585428 GNB1P62873 340 aa11.22□□□□□ -0.61
SDF2-202ENST00000585428 LSAMPQ13449 338 aa11.22□□□□□ -0.61
SDF2-202ENST00000585428 TMEM30BQ3MIR4 351 aa11.22□□□□□ -0.61
SDF2-202ENST00000585428 MORN2Q502X0 79 aa11.22□□□□□ -0.61
SDF2-202ENST00000585428 DDI2Q5TDH0 399 aa11.22□□□□□ -0.61
SDF2-202ENST00000585428 STX19Q8N4C7 294 aa11.22□□□□□ -0.61
SDF2-202ENST00000585428 MINDY2Q8NBR6 621 aa11.22□□□□□ -0.61
SDF2-202ENST00000585428 DCUN1D4Q92564 292 aa11.22□□□□□ -0.61
SDF2-202ENST00000585428 ORAI1Q96D31 301 aa11.22□□□□□ -0.61
SDF2-202ENST00000585428 RCHY1Q96PM5 261 aa11.22□□□□□ -0.61
SDF2-202ENST00000585428 S100A13Q99584 98 aa11.22□□□□□ -0.61
SDF2-202ENST00000585428 FAM53CQ9NYF3 392 aa11.22□□□□□ -0.61
SDF2-202ENST00000585428 RCC2Q9P258 522 aaKnown RBP11.22□□□□□ -0.61
SDF2-202ENST00000585428 TRAPPC2LQ9UL33 140 aa11.22□□□□□ -0.61
SDF2-202ENST00000585428 RPL36Q9Y3U8 105 aaKnown RBP11.22□□□□□ -0.61
SDF2-202ENST00000585428 WSB1Q9Y6I7 421 aa11.22□□□□□ -0.61
SDF2-202ENST00000585428 IGHV7-81A0A0B4J1V7 117 aa11.21□□□□□ -0.61
SDF2-202ENST00000585428 MCRIP1C9JLW8 97 aa11.21□□□□□ -0.61
SDF2-202ENST00000585428 H3BNX3 289 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms