RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 USF1P22415 310 aaPredicted RBP13.3□□□□□ -0.28
SS18-226ENST00000585241 OR3A3P47888 321 aa13.3□□□□□ -0.28
SS18-226ENST00000585241 HTD2P86397 168 aa13.3□□□□□ -0.28
SS18-226ENST00000585241 PAX2Q02962 417 aa13.3□□□□□ -0.28
SS18-226ENST00000585241 IGSF11Q5DX21 431 aa13.3□□□□□ -0.28
SS18-226ENST00000585241 ZNF660Q6AZW8 331 aaPredicted RBP13.3□□□□□ -0.28
SS18-226ENST00000585241 FAAP20Q6NZ36 180 aa13.3□□□□□ -0.28
SS18-226ENST00000585241 C5orf24Q7Z6I8 188 aa13.3□□□□□ -0.28
SS18-226ENST00000585241 FAM185AQ8N0U4 392 aa13.3□□□□□ -0.28
SS18-226ENST00000585241 POC5Q8NA72 575 aa13.3□□□□□ -0.28
SS18-226ENST00000585241 OR10A7Q8NGE5 316 aa13.3□□□□□ -0.28
SS18-226ENST00000585241 OR1L1Q8NH94 360 aa13.3□□□□□ -0.28
SS18-226ENST00000585241 ARL11Q969Q4 196 aa13.3□□□□□ -0.28
SS18-226ENST00000585241 KIRREL1Q96J84 757 aa13.3□□□□□ -0.28
SS18-226ENST00000585241 ZNF714Q96N38 554 aa13.3□□□□□ -0.28
SS18-226ENST00000585241 GAL3ST2Q9H3Q3 398 aa13.3□□□□□ -0.28
SS18-226ENST00000585241 EHFQ9NZC4 300 aa13.3□□□□□ -0.28
SS18-226ENST00000585241 PDZD2O15018 2839 aa13.29□□□□□ -0.28
SS18-226ENST00000585241 LINC00854A0A1B0GVQ3 168 aa13.29□□□□□ -0.28
SS18-226ENST00000585241 DISC1C4P0D8 188 aa13.29□□□□□ -0.28
SS18-226ENST00000585241 PHF1O43189 567 aaPredicted RBP13.29□□□□□ -0.28
SS18-226ENST00000585241 SPINT2O43291 252 aa13.29□□□□□ -0.28
SS18-226ENST00000585241 FOXH1O75593 365 aa13.29□□□□□ -0.28
SS18-226ENST00000585241 PTTG1O95997 202 aa13.29□□□□□ -0.28
SS18-226ENST00000585241 HEXAP06865 529 aa13.29□□□□□ -0.28
SS18-226ENST00000585241 ZNF728P0DKX0 622 aa13.29□□□□□ -0.28
SS18-226ENST00000585241 OR5H8P0DN80 308 aa13.29□□□□□ -0.28
SS18-226ENST00000585241 ZFP36P26651 326 aaKnown RBP13.29□□□□□ -0.28
SS18-226ENST00000585241 SLC6A1P30531 599 aa13.29□□□□□ -0.28
SS18-226ENST00000585241 IL2RGP31785 369 aa13.29□□□□□ -0.28
SS18-226ENST00000585241 RFX2P48378 723 aa13.29□□□□□ -0.28
SS18-226ENST00000585241 LOXL1Q08397 574 aaPredicted RBP13.29□□□□□ -0.28
SS18-226ENST00000585241 MZT2BQ6NZ67 158 aa13.29□□□□□ -0.28
SS18-226ENST00000585241 DHRS11Q6UWP2 260 aa13.29□□□□□ -0.28
SS18-226ENST00000585241 LHFPL1Q86WI0 220 aa13.29□□□□□ -0.28
SS18-226ENST00000585241 OR56B4Q8NH76 319 aa13.29□□□□□ -0.28
SS18-226ENST00000585241 GALMQ96C23 342 aa13.29□□□□□ -0.28
SS18-226ENST00000585241 SLC6A7Q99884 636 aa13.29□□□□□ -0.28
SS18-226ENST00000585241 LOC105371242A0A075B767 164 aa13.28□□□□□ -0.28
SS18-226ENST00000585241 PPIAL4CA0A0B4J2A2 164 aa13.28□□□□□ -0.28
SS18-226ENST00000585241 C17orf98A8MV24 154 aa13.28□□□□□ -0.28
SS18-226ENST00000585241 FAM157AC9JC47 383 aa13.28□□□□□ -0.28
SS18-226ENST00000585241 TUSC2O75896 110 aa13.28□□□□□ -0.28
SS18-226ENST00000585241 RBP4P02753 201 aa13.28□□□□□ -0.28
SS18-226ENST00000585241 AMY2AP04746 511 aa13.28□□□□□ -0.28
SS18-226ENST00000585241 PPIAL4GP0DN37 164 aa13.28□□□□□ -0.28
SS18-226ENST00000585241 CCL3L1P16619 93 aa13.28□□□□□ -0.28
SS18-226ENST00000585241 FPR2P25090 351 aa13.28□□□□□ -0.28
SS18-226ENST00000585241 RGS21Q2M5E4 152 aa13.28□□□□□ -0.28
SS18-226ENST00000585241 HEPN1Q6WQI6 88 aa13.28□□□□□ -0.28
SS18-226ENST00000585241 H1FOOQ8IZA3 346 aaPredicted RBP13.28□□□□□ -0.28
SS18-226ENST00000585241 C11orf42Q8N5U0 333 aa13.28□□□□□ -0.28
SS18-226ENST00000585241 OR51S1Q8NGJ8 323 aa13.28□□□□□ -0.28
SS18-226ENST00000585241 OR52M1Q8NGK5 317 aa13.28□□□□□ -0.28
SS18-226ENST00000585241 GIMAP1Q8WWP7 306 aa13.28□□□□□ -0.28
SS18-226ENST00000585241 PRRT1Q99946 306 aa13.28□□□□□ -0.28
SS18-226ENST00000585241 JPT1Q9UK76 154 aa13.28□□□□□ -0.28
SS18-226ENST00000585241 MED13LQ71F56 2210 aa13.28□□□□□ -0.28
SS18-226ENST00000585241 ABCA2Q9BZC7 2435 aa13.28□□□□□ -0.28
SS18-226ENST00000585241 CSMD2Q7Z408 3487 aa13.27□□□□□ -0.28
SS18-226ENST00000585241 A0A1W2PPH5 198 aa13.27□□□□□ -0.29
SS18-226ENST00000585241 MEX3AA1L020 520 aaKnown RBP13.27□□□□□ -0.29
SS18-226ENST00000585241 SDCBPO00560 298 aaPredicted RBP13.27□□□□□ -0.29
SS18-226ENST00000585241 ENSAO43768 121 aaKnown RBP13.27□□□□□ -0.29
SS18-226ENST00000585241 IFNA6P05013 189 aa13.27□□□□□ -0.29
SS18-226ENST00000585241 LIPFP07098 398 aa13.27□□□□□ -0.29
SS18-226ENST00000585241 LOXL3P58215 753 aa13.27□□□□□ -0.29
SS18-226ENST00000585241 PLA1AQ53H76 456 aa13.27□□□□□ -0.29
SS18-226ENST00000585241 LY6G6FQ5SQ64 297 aa13.27□□□□□ -0.29
SS18-226ENST00000585241 TMEM17Q86X19 198 aa13.27□□□□□ -0.29
SS18-226ENST00000585241 KIR3DL3Q8N743 410 aa13.27□□□□□ -0.29
SS18-226ENST00000585241 DUSP18Q8NEJ0 188 aa13.27□□□□□ -0.29
SS18-226ENST00000585241 UBALD1Q8TB05 177 aa13.27□□□□□ -0.29
SS18-226ENST00000585241 MCUBQ9NWR8 336 aa13.27□□□□□ -0.29
SS18-226ENST00000585241 IDI2-AS1Q9NZ38 188 aa13.27□□□□□ -0.29
SS18-226ENST00000585241 SCP2D1Q9UJQ7 156 aa13.27□□□□□ -0.29
SS18-226ENST00000585241 IGHV2-70DA0A0C4DH43 119 aa13.26□□□□□ -0.29
SS18-226ENST00000585241 M0R1W7 72 aa13.26□□□□□ -0.29
SS18-226ENST00000585241 BET1O15155 118 aa13.26□□□□□ -0.29
SS18-226ENST00000585241 ZBTB25P24278 435 aa13.26□□□□□ -0.29
SS18-226ENST00000585241 OXA1LQ15070 435 aa13.26□□□□□ -0.29
SS18-226ENST00000585241 Q3ZCU0 254 aa13.26□□□□□ -0.29
SS18-226ENST00000585241 ZNF782Q6ZMW2 699 aaPredicted RBP13.26□□□□□ -0.29
SS18-226ENST00000585241 NRARPQ7Z6K4 114 aa13.26□□□□□ -0.29
SS18-226ENST00000585241 PRR18Q8N4B5 295 aa13.26□□□□□ -0.29
SS18-226ENST00000585241 OR13C8Q8NGS7 320 aa13.26□□□□□ -0.29
SS18-226ENST00000585241 OR6F1Q8NGZ6 308 aa13.26□□□□□ -0.29
SS18-226ENST00000585241 OR10J5Q8NHC4 309 aa13.26□□□□□ -0.29
SS18-226ENST00000585241 RFESDQ8TAC1 157 aa13.26□□□□□ -0.29
SS18-226ENST00000585241 FAM216AQ8WUB2 273 aa13.26□□□□□ -0.29
SS18-226ENST00000585241 IL1F10Q8WWZ1 152 aa13.26□□□□□ -0.29
SS18-226ENST00000585241 MRGPRFQ96AM1 343 aa13.26□□□□□ -0.29
SS18-226ENST00000585241 Q96MF0 132 aa13.26□□□□□ -0.29
SS18-226ENST00000585241 REG4Q9BYZ8 158 aa13.26□□□□□ -0.29
SS18-226ENST00000585241 GFOD1Q9NXC2 390 aa13.26□□□□□ -0.29
SS18-226ENST00000585241 OR1A1Q9P1Q5 309 aa13.26□□□□□ -0.29
SS18-226ENST00000585241 COPZ2Q9P299 210 aa13.26□□□□□ -0.29
SS18-226ENST00000585241 SLC23A1Q9UHI7 598 aa13.26□□□□□ -0.29
SS18-226ENST00000585241 CCDC168Q8NDH2 2452 aa13.25□□□□□ -0.29
SS18-226ENST00000585241 A0A087X0M5 115 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms