RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 NIT2Q9NQR4 276 aa12.1□□□□□ -0.47
CDK5RAP3-237ENST00000585163 GSN-AS1Q9NRJ2 163 aa12.1□□□□□ -0.47
CDK5RAP3-237ENST00000585163 PIGBOS1A0A0B4J2F0 54 aa12.1□□□□□ -0.47
CDK5RAP3-237ENST00000585163 A0A1B0GU03 582 aa12.1□□□□□ -0.47
CDK5RAP3-237ENST00000585163 KIAA1324LA8MWY0 1029 aaPredicted RBP12.1□□□□□ -0.47
CDK5RAP3-237ENST00000585163 NEURL1O76050 574 aa12.1□□□□□ -0.47
CDK5RAP3-237ENST00000585163 HBE1P02100 147 aa12.1□□□□□ -0.47
CDK5RAP3-237ENST00000585163 CELA3AP09093 270 aa12.1□□□□□ -0.47
CDK5RAP3-237ENST00000585163 ZNF880Q6PDB4 577 aa12.1□□□□□ -0.47
CDK5RAP3-237ENST00000585163 ZNF429Q86V71 674 aa12.1□□□□□ -0.47
CDK5RAP3-237ENST00000585163 UBALD2Q8IYN6 164 aa12.1□□□□□ -0.47
CDK5RAP3-237ENST00000585163 H1FOOQ8IZA3 346 aaPredicted RBP12.1□□□□□ -0.47
CDK5RAP3-237ENST00000585163 ZNF295-AS1Q8N0V1 137 aa12.1□□□□□ -0.47
CDK5RAP3-237ENST00000585163 CYB561D1Q8N8Q1 229 aa12.1□□□□□ -0.47
CDK5RAP3-237ENST00000585163 OR2M7Q8NG81 312 aa12.1□□□□□ -0.47
CDK5RAP3-237ENST00000585163 OR10J5Q8NHC4 309 aa12.1□□□□□ -0.47
CDK5RAP3-237ENST00000585163 FAM173AQ9BQD7 235 aa12.1□□□□□ -0.47
CDK5RAP3-237ENST00000585163 OPA3Q9H6K4 179 aa12.1□□□□□ -0.47
CDK5RAP3-237ENST00000585163 WSB1Q9Y6I7 421 aa12.1□□□□□ -0.47
CDK5RAP3-237ENST00000585163 TRAV24A0A0B4J272 114 aa12.09□□□□□ -0.47
CDK5RAP3-237ENST00000585163 H0YL77 283 aa12.09□□□□□ -0.47
CDK5RAP3-237ENST00000585163 HS3ST1O14792 307 aa12.09□□□□□ -0.47
CDK5RAP3-237ENST00000585163 TXNL1O43396 289 aa12.09□□□□□ -0.47
CDK5RAP3-237ENST00000585163 DFFBO76075 338 aa12.09□□□□□ -0.47
CDK5RAP3-237ENST00000585163 ARR3P36575 388 aa12.09□□□□□ -0.47
CDK5RAP3-237ENST00000585163 TAGLN2P37802 199 aaKnown RBP12.09□□□□□ -0.47
CDK5RAP3-237ENST00000585163 EIF2S3P41091 472 aaKnown RBP12.09□□□□□ -0.47
CDK5RAP3-237ENST00000585163 UBE2KP61086 200 aa12.09□□□□□ -0.47
CDK5RAP3-237ENST00000585163 GPR146Q96CH1 333 aa12.09□□□□□ -0.47
CDK5RAP3-237ENST00000585163 THOC3Q96J01 351 aaKnown RBP12.09□□□□□ -0.47
CDK5RAP3-237ENST00000585163 ZNF488Q96MN9 340 aa12.09□□□□□ -0.47
CDK5RAP3-237ENST00000585163 TRAV1-1A0A0B4J248 108 aa12.09□□□□□ -0.47
CDK5RAP3-237ENST00000585163 ZNF727A8MUV8 499 aa12.09□□□□□ -0.47
CDK5RAP3-237ENST00000585163 FBP1P09467 338 aa12.09□□□□□ -0.47
CDK5RAP3-237ENST00000585163 WNT2P09544 360 aa12.09□□□□□ -0.47
CDK5RAP3-237ENST00000585163 CEBPGP53567 150 aa12.09□□□□□ -0.47
CDK5RAP3-237ENST00000585163 RAB2AP61019 212 aa12.09□□□□□ -0.47
CDK5RAP3-237ENST00000585163 DLK1P80370 383 aa12.09□□□□□ -0.47
CDK5RAP3-237ENST00000585163 KHDC3LQ587J8 217 aa12.09□□□□□ -0.47
CDK5RAP3-237ENST00000585163 RDH5Q92781 318 aa12.09□□□□□ -0.47
CDK5RAP3-237ENST00000585163 RAB40CQ96S21 281 aa12.09□□□□□ -0.47
CDK5RAP3-237ENST00000585163 CABLES2Q9BTV7 478 aa12.09□□□□□ -0.47
CDK5RAP3-237ENST00000585163 PPIHO43447 177 aaKnown RBP12.08□□□□□ -0.48
CDK5RAP3-237ENST00000585163 SYNGR4O95473 234 aa12.08□□□□□ -0.48
CDK5RAP3-237ENST00000585163 SERPINE2P07093 398 aa12.08□□□□□ -0.48
CDK5RAP3-237ENST00000585163 RPS10P46783 165 aaKnown RBP12.08□□□□□ -0.48
CDK5RAP3-237ENST00000585163 RPL23AP62750 156 aaKnown RBP12.08□□□□□ -0.48
CDK5RAP3-237ENST00000585163 HLA-DRB3P79483 266 aa12.08□□□□□ -0.48
CDK5RAP3-237ENST00000585163 ZNF573Q86YE8 665 aa12.08□□□□□ -0.48
CDK5RAP3-237ENST00000585163 OR51H1Q8NH63 302 aa12.08□□□□□ -0.48
CDK5RAP3-237ENST00000585163 NIPSNAP3BQ9BS92 247 aa12.08□□□□□ -0.48
CDK5RAP3-237ENST00000585163 B4GALT7Q9UBV7 327 aa12.08□□□□□ -0.48
CDK5RAP3-237ENST00000585163 ERRFI1Q9UJM3 462 aaPredicted RBP12.08□□□□□ -0.48
CDK5RAP3-237ENST00000585163 LOXL2Q9Y4K0 774 aa12.08□□□□□ -0.48
CDK5RAP3-237ENST00000585163 ZNF407Q9C0G0 2248 aa12.08□□□□□ -0.48
CDK5RAP3-237ENST00000585163 OR5B21A6NL26 309 aa12.08□□□□□ -0.48
CDK5RAP3-237ENST00000585163 LILRA1O75019 489 aa12.08□□□□□ -0.48
CDK5RAP3-237ENST00000585163 PSG2P11465 335 aa12.08□□□□□ -0.48
CDK5RAP3-237ENST00000585163 ELOBQ15370 118 aa12.08□□□□□ -0.48
CDK5RAP3-237ENST00000585163 THNSL2Q86YJ6 484 aa12.08□□□□□ -0.48
CDK5RAP3-237ENST00000585163 FAM58AQ8N1B3 248 aa12.08□□□□□ -0.48
CDK5RAP3-237ENST00000585163 APH1AQ96BI3 265 aa12.08□□□□□ -0.48
CDK5RAP3-237ENST00000585163 TVP23CQ96ET8 276 aa12.08□□□□□ -0.48
CDK5RAP3-237ENST00000585163 ZPBPQ9BS86 351 aa12.08□□□□□ -0.48
CDK5RAP3-237ENST00000585163 TMPRSS5Q9H3S3 457 aa12.08□□□□□ -0.48
CDK5RAP3-237ENST00000585163 MMP24Q9Y5R2 645 aa12.08□□□□□ -0.48
CDK5RAP3-237ENST00000585163 MPC1Q9Y5U8 109 aa12.08□□□□□ -0.48
CDK5RAP3-237ENST00000585163 COL27A1Q8IZC6 1860 aaPredicted RBP12.08□□□□□ -0.48
CDK5RAP3-237ENST00000585163 CXorf65A6NEN9 183 aa12.07□□□□□ -0.48
CDK5RAP3-237ENST00000585163 ANKRD30BLA7E2S9 258 aa12.07□□□□□ -0.48
CDK5RAP3-237ENST00000585163 H3BP45 60 aa12.07□□□□□ -0.48
CDK5RAP3-237ENST00000585163 IFNA5P01569 189 aa12.07□□□□□ -0.48
CDK5RAP3-237ENST00000585163 GNG3P63215 75 aa12.07□□□□□ -0.48
CDK5RAP3-237ENST00000585163 TCEAL6Q6IPX3 200 aa12.07□□□□□ -0.48
CDK5RAP3-237ENST00000585163 Q6ZRM9 215 aa12.07□□□□□ -0.48
CDK5RAP3-237ENST00000585163 SLC35E3Q7Z769 313 aa12.07□□□□□ -0.48
CDK5RAP3-237ENST00000585163 OR10G4Q8NGN3 311 aa12.07□□□□□ -0.48
CDK5RAP3-237ENST00000585163 OR51M1Q9H341 326 aa12.07□□□□□ -0.48
CDK5RAP3-237ENST00000585163 DLL3Q9NYJ7 618 aa12.07□□□□□ -0.48
CDK5RAP3-237ENST00000585163 NPIPB11E5RHQ5 1161 aa12.07□□□□□ -0.48
CDK5RAP3-237ENST00000585163 ACP1P24666 158 aa12.07□□□□□ -0.48
CDK5RAP3-237ENST00000585163 PLP2Q04941 152 aa12.07□□□□□ -0.48
CDK5RAP3-237ENST00000585163 C17orf78Q8N4C9 275 aa12.07□□□□□ -0.48
CDK5RAP3-237ENST00000585163 Q8WTZ3 238 aa12.07□□□□□ -0.48
CDK5RAP3-237ENST00000585163 HES7Q9BYE0 225 aa12.07□□□□□ -0.48
CDK5RAP3-237ENST00000585163 SIRT7Q9NRC8 400 aa12.07□□□□□ -0.48
CDK5RAP3-237ENST00000585163 DEGS1O15121 323 aa12.06□□□□□ -0.48
CDK5RAP3-237ENST00000585163 CNOT4O95628 575 aaKnown RBP12.06□□□□□ -0.48
CDK5RAP3-237ENST00000585163 IGLV2-14P01704 120 aa12.06□□□□□ -0.48
CDK5RAP3-237ENST00000585163 MAGEA5P43359 124 aa12.06□□□□□ -0.48
CDK5RAP3-237ENST00000585163 ZXDAP98168 799 aa12.06□□□□□ -0.48
CDK5RAP3-237ENST00000585163 TMEM267Q0VDI3 215 aaPredicted RBP12.06□□□□□ -0.48
CDK5RAP3-237ENST00000585163 KIAA0141Q14154 515 aaPredicted RBP12.06□□□□□ -0.48
CDK5RAP3-237ENST00000585163 AARDQ4LEZ3 155 aa12.06□□□□□ -0.48
CDK5RAP3-237ENST00000585163 NCMAPQ5T1S8 102 aa12.06□□□□□ -0.48
CDK5RAP3-237ENST00000585163 OR10V1Q8NGI7 309 aa12.06□□□□□ -0.48
CDK5RAP3-237ENST00000585163 LSM10Q969L4 123 aaKnown RBP12.06□□□□□ -0.48
CDK5RAP3-237ENST00000585163 PKIBQ9C010 78 aa12.06□□□□□ -0.48
CDK5RAP3-237ENST00000585163 KMT2EQ8IZD2 1858 aa12.06□□□□□ -0.48
CDK5RAP3-237ENST00000585163 LOC102723971A0A1B0GUV8 181 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms