RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 SLC38A6Q8IZM9 456 aa11.62□□□□□ -0.55
UBBP4-202ENST00000584755 SPICQ8N5J4 248 aa11.62□□□□□ -0.55
UBBP4-202ENST00000584755 OR11H7Q8NGC8 314 aa11.62□□□□□ -0.55
UBBP4-202ENST00000584755 OR10J5Q8NHC4 309 aa11.62□□□□□ -0.55
UBBP4-202ENST00000584755 MRGPRDQ8TDS7 321 aa11.62□□□□□ -0.55
UBBP4-202ENST00000584755 DACT3Q96B18 629 aaPredicted RBP11.62□□□□□ -0.55
UBBP4-202ENST00000584755 C14orf79Q96F83 325 aa11.62□□□□□ -0.55
UBBP4-202ENST00000584755 ZNF486Q96H40 463 aaPredicted RBP11.62□□□□□ -0.55
UBBP4-202ENST00000584755 RSRP1Q9BUV0 290 aa11.62□□□□□ -0.55
UBBP4-202ENST00000584755 PLEKHF2Q9H8W4 249 aa11.62□□□□□ -0.55
UBBP4-202ENST00000584755 OR6C3Q9NZP0 311 aa11.62□□□□□ -0.55
UBBP4-202ENST00000584755 OR1A1Q9P1Q5 309 aa11.62□□□□□ -0.55
UBBP4-202ENST00000584755 ZNF69Q9UC07 566 aa11.62□□□□□ -0.55
UBBP4-202ENST00000584755 C14orf166Q9Y224 244 aaKnown RBP11.62□□□□□ -0.55
UBBP4-202ENST00000584755 OR2W1Q9Y3N9 320 aa11.62□□□□□ -0.55
UBBP4-202ENST00000584755 SPTAN1Q13813 2472 aaKnown RBP11.61□□□□□ -0.55
UBBP4-202ENST00000584755 LRBAP50851 2863 aa11.61□□□□□ -0.55
UBBP4-202ENST00000584755 LYNX1G3V0Z9 82 aa11.61□□□□□ -0.55
UBBP4-202ENST00000584755 TMPRSS2O15393 492 aa11.61□□□□□ -0.55
UBBP4-202ENST00000584755 SSNA1O43805 119 aa11.61□□□□□ -0.55
UBBP4-202ENST00000584755 FCN3O75636 299 aa11.61□□□□□ -0.55
UBBP4-202ENST00000584755 CLDN1O95832 211 aa11.61□□□□□ -0.55
UBBP4-202ENST00000584755 LYNX1P0DP58 116 aa11.61□□□□□ -0.55
UBBP4-202ENST00000584755 SUPT4H1P63272 117 aaKnown RBP11.61□□□□□ -0.55
UBBP4-202ENST00000584755 HTD2P86397 168 aa11.61□□□□□ -0.55
UBBP4-202ENST00000584755 ZNF565Q8N9K5 539 aa11.61□□□□□ -0.55
UBBP4-202ENST00000584755 OR1L1Q8NH94 360 aa11.61□□□□□ -0.55
UBBP4-202ENST00000584755 CORO2AQ92828 525 aa11.61□□□□□ -0.55
UBBP4-202ENST00000584755 GALMQ96C23 342 aa11.61□□□□□ -0.55
UBBP4-202ENST00000584755 COL12A1Q99715 3063 aa11.61□□□□□ -0.55
UBBP4-202ENST00000584755 DCTN5Q9BTE1 182 aa11.61□□□□□ -0.55
UBBP4-202ENST00000584755 LINC00574Q9H8X3 128 aa11.61□□□□□ -0.55
UBBP4-202ENST00000584755 LRRK2Q5S007 2527 aa11.61□□□□□ -0.55
UBBP4-202ENST00000584755 FAM172BPA6NC97 362 aa11.6□□□□□ -0.55
UBBP4-202ENST00000584755 DUS4LO95620 317 aaKnown RBP11.6□□□□□ -0.55
UBBP4-202ENST00000584755 HLA-AP01891 365 aaKnown RBP11.6□□□□□ -0.55
UBBP4-202ENST00000584755 DAOP14920 347 aa11.6□□□□□ -0.55
UBBP4-202ENST00000584755 AKR1C4P17516 323 aa11.6□□□□□ -0.55
UBBP4-202ENST00000584755 PI3P19957 117 aa11.6□□□□□ -0.55
UBBP4-202ENST00000584755 SSTR5P35346 364 aa11.6□□□□□ -0.55
UBBP4-202ENST00000584755 FXYD4P59646 89 aa11.6□□□□□ -0.55
UBBP4-202ENST00000584755 LPCAT3Q6P1A2 487 aa11.6□□□□□ -0.55
UBBP4-202ENST00000584755 LYPD2Q6UXB3 125 aa11.6□□□□□ -0.55
UBBP4-202ENST00000584755 TCF23Q7RTU1 214 aa11.6□□□□□ -0.55
UBBP4-202ENST00000584755 MITD1Q8WV92 249 aa11.6□□□□□ -0.55
UBBP4-202ENST00000584755 IL1F10Q8WWZ1 152 aa11.6□□□□□ -0.55
UBBP4-202ENST00000584755 TOMM40LQ969M1 308 aa11.6□□□□□ -0.55
UBBP4-202ENST00000584755 ARL11Q969Q4 196 aa11.6□□□□□ -0.55
UBBP4-202ENST00000584755 CTSZQ9UBR2 303 aa11.6□□□□□ -0.55
UBBP4-202ENST00000584755 SLC25A10Q9UBX3 287 aaPredicted RBP11.6□□□□□ -0.55
UBBP4-202ENST00000584755 DSCAML1Q8TD84 2053 aa11.6□□□□□ -0.55
UBBP4-202ENST00000584755 IGKV1D-13A0A0B4J2D9 117 aa11.59□□□□□ -0.55
UBBP4-202ENST00000584755 CRYM-AS1A6NIL9 109 aa11.59□□□□□ -0.55
UBBP4-202ENST00000584755 F2RL2O00254 374 aa11.59□□□□□ -0.55
UBBP4-202ENST00000584755 SPINT2O43291 252 aa11.59□□□□□ -0.55
UBBP4-202ENST00000584755 ADAM20O43506 726 aa11.59□□□□□ -0.55
UBBP4-202ENST00000584755 SFT2D2O95562 160 aa11.59□□□□□ -0.55
UBBP4-202ENST00000584755 F12P00748 615 aaPredicted RBP11.59□□□□□ -0.55
UBBP4-202ENST00000584755 IGKV1-13P0DP09 117 aa11.59□□□□□ -0.55
UBBP4-202ENST00000584755 CXCL3P19876 107 aa11.59□□□□□ -0.55
UBBP4-202ENST00000584755 GNRHRP30968 328 aa11.59□□□□□ -0.55
UBBP4-202ENST00000584755 IL2RGP31785 369 aa11.59□□□□□ -0.55
UBBP4-202ENST00000584755 EDDM3BP56851 147 aa11.59□□□□□ -0.55
UBBP4-202ENST00000584755 RND3P61587 244 aa11.59□□□□□ -0.55
UBBP4-202ENST00000584755 MEF2CQ06413 473 aaPredicted RBP11.59□□□□□ -0.55
UBBP4-202ENST00000584755 LDLRAD3Q86YD5 345 aa11.59□□□□□ -0.55
UBBP4-202ENST00000584755 TCTE3Q8IZS6 198 aa11.59□□□□□ -0.55
UBBP4-202ENST00000584755 PRR18Q8N4B5 295 aa11.59□□□□□ -0.55
UBBP4-202ENST00000584755 C12orf45Q8N5I9 185 aaPredicted RBP11.59□□□□□ -0.55
UBBP4-202ENST00000584755 OR2AK2Q8NG84 335 aa11.59□□□□□ -0.55
UBBP4-202ENST00000584755 UBALD1Q8TB05 177 aa11.59□□□□□ -0.55
UBBP4-202ENST00000584755 CLEC4MQ9H2X3 399 aaPredicted RBP11.59□□□□□ -0.55
UBBP4-202ENST00000584755 CHODLQ9H9P2 273 aa11.59□□□□□ -0.55
UBBP4-202ENST00000584755 RDH8Q9NYR8 311 aa11.59□□□□□ -0.55
UBBP4-202ENST00000584755 RALYQ9UKM9 306 aaKnown RBP11.59□□□□□ -0.55
UBBP4-202ENST00000584755 KIAA2026Q5HYC2 2103 aa11.59□□□□□ -0.55
UBBP4-202ENST00000584755 A0A0B4J2A0 478 aa11.58□□□□□ -0.56
UBBP4-202ENST00000584755 NDUFB3O43676 98 aa11.58□□□□□ -0.56
UBBP4-202ENST00000584755 LY6HO94772 140 aa11.58□□□□□ -0.56
UBBP4-202ENST00000584755 HNRNPCP07910 306 aaKnown RBP eCLIP11.58□□□□□ -0.56
UBBP4-202ENST00000584755 PLA2G2AP14555 144 aa11.58□□□□□ -0.56
UBBP4-202ENST00000584755 CDKN1AP38936 164 aa11.58□□□□□ -0.56
UBBP4-202ENST00000584755 CEACAM6P40199 344 aa11.58□□□□□ -0.56
UBBP4-202ENST00000584755 EFNA4P52798 201 aa11.58□□□□□ -0.56
UBBP4-202ENST00000584755 PIGPP57054 158 aa11.58□□□□□ -0.56
UBBP4-202ENST00000584755 TMEM33P57088 247 aa11.58□□□□□ -0.56
UBBP4-202ENST00000584755 C17orf58Q2M2W7 97 aa11.58□□□□□ -0.56
UBBP4-202ENST00000584755 TMEM155Q4W5P6 130 aa11.58□□□□□ -0.56
UBBP4-202ENST00000584755 LRRC10Q5BKY1 277 aa11.58□□□□□ -0.56
UBBP4-202ENST00000584755 FAM185AQ8N0U4 392 aa11.58□□□□□ -0.56
UBBP4-202ENST00000584755 FGFRL1Q8N441 504 aa11.58□□□□□ -0.56
UBBP4-202ENST00000584755 FAM216AQ8WUB2 273 aa11.58□□□□□ -0.56
UBBP4-202ENST00000584755 RANGRFQ9HD47 186 aaPredicted RBP11.58□□□□□ -0.56
UBBP4-202ENST00000584755 RAB9BQ9NP90 201 aa11.58□□□□□ -0.56
UBBP4-202ENST00000584755 SLC2A9Q9NRM0 540 aa11.58□□□□□ -0.56
UBBP4-202ENST00000584755 CALYQ9NYX4 217 aa11.58□□□□□ -0.56
UBBP4-202ENST00000584755 SHPKQ9UHJ6 478 aa11.58□□□□□ -0.56
UBBP4-202ENST00000584755 TRGV10A0A0A0MS01 117 aa11.57□□□□□ -0.56
UBBP4-202ENST00000584755 KBTBD11-OT1A0A1B0GTJ5 212 aa11.57□□□□□ -0.56
UBBP4-202ENST00000584755 DBX1A6NMT0 343 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms