RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 FAM90A15PP0C7V4 464 aa12.59□□□□□ -0.39
SKA2-209ENST00000583976 FAM90A13PP0C7W8 464 aa12.59□□□□□ -0.39
SKA2-209ENST00000583976 FAM90A14PP0C7W9 464 aa12.59□□□□□ -0.39
SKA2-209ENST00000583976 FAM90A24PP0C7X0 464 aa12.59□□□□□ -0.39
SKA2-209ENST00000583976 SNRPBP14678 240 aaKnown RBP12.59□□□□□ -0.39
SKA2-209ENST00000583976 FUT3P21217 361 aa12.59□□□□□ -0.39
SKA2-209ENST00000583976 BLVRBP30043 206 aaPredicted RBP12.59□□□□□ -0.39
SKA2-209ENST00000583976 RPS19P39019 145 aaKnown RBP12.59□□□□□ -0.39
SKA2-209ENST00000583976 RANBP1P43487 201 aa12.59□□□□□ -0.39
SKA2-209ENST00000583976 RPL5P46777 297 aaKnown RBP12.59□□□□□ -0.39
SKA2-209ENST00000583976 SERPINB10P48595 397 aa12.59□□□□□ -0.39
SKA2-209ENST00000583976 VEGFCP49767 419 aa12.59□□□□□ -0.39
SKA2-209ENST00000583976 SLC16A12Q6ZSM3 486 aa12.59□□□□□ -0.39
SKA2-209ENST00000583976 RTN4RL2Q86UN3 420 aa12.59□□□□□ -0.39
SKA2-209ENST00000583976 ANKRD13BQ86YJ7 626 aa12.59□□□□□ -0.39
SKA2-209ENST00000583976 MRAPQ8TCY5 172 aa12.59□□□□□ -0.39
SKA2-209ENST00000583976 WIPF2Q8TF74 440 aaPredicted RBP12.59□□□□□ -0.39
SKA2-209ENST00000583976 ZNF714Q96N38 554 aa12.59□□□□□ -0.39
SKA2-209ENST00000583976 NEDD4LQ96PU5 975 aa12.59□□□□□ -0.39
SKA2-209ENST00000583976 URM1Q9BTM9 101 aaKnown RBP12.59□□□□□ -0.39
SKA2-209ENST00000583976 TM2D1Q9BX74 207 aa12.59□□□□□ -0.39
SKA2-209ENST00000583976 HEXA-AS1Q9H8Q6 139 aa12.59□□□□□ -0.39
SKA2-209ENST00000583976 SPACA1Q9HBV2 294 aa12.59□□□□□ -0.39
SKA2-209ENST00000583976 AURKAIP1Q9NWT8 199 aaPredicted RBP12.59□□□□□ -0.39
SKA2-209ENST00000583976 RCC2Q9P258 522 aaKnown RBP12.59□□□□□ -0.39
SKA2-209ENST00000583976 KIF25Q9UIL4 384 aa12.59□□□□□ -0.39
SKA2-209ENST00000583976 RAB22AQ9UL26 194 aa12.59□□□□□ -0.39
SKA2-209ENST00000583976 TRGV10A0A0A0MS01 117 aa12.58□□□□□ -0.4
SKA2-209ENST00000583976 TRAV39A0A0B4J263 110 aa12.58□□□□□ -0.4
SKA2-209ENST00000583976 ODAMA1E959 279 aa12.58□□□□□ -0.4
SKA2-209ENST00000583976 A6NDX4 124 aa12.58□□□□□ -0.4
SKA2-209ENST00000583976 LDLRAD4O15165 306 aa12.58□□□□□ -0.4
SKA2-209ENST00000583976 PDCD6O75340 191 aa12.58□□□□□ -0.4
SKA2-209ENST00000583976 ARG1P05089 322 aa12.58□□□□□ -0.4
SKA2-209ENST00000583976 ZNF728P0DKX0 622 aa12.58□□□□□ -0.4
SKA2-209ENST00000583976 LGALS4P56470 323 aa12.58□□□□□ -0.4
SKA2-209ENST00000583976 RBM39Q14498 530 aaKnown RBP12.58□□□□□ -0.4
SKA2-209ENST00000583976 RSBN1Q5VWQ0 802 aaPredicted RBP12.58□□□□□ -0.4
SKA2-209ENST00000583976 LIAT1Q6ZQX7 453 aa12.58□□□□□ -0.4
SKA2-209ENST00000583976 C6orf201Q7Z4U5 140 aa12.58□□□□□ -0.4
SKA2-209ENST00000583976 CLVS1Q8IUQ0 354 aaPredicted RBP12.58□□□□□ -0.4
SKA2-209ENST00000583976 Q8N2B8 174 aa12.58□□□□□ -0.4
SKA2-209ENST00000583976 CCDC107Q8WV48 283 aa12.58□□□□□ -0.4
SKA2-209ENST00000583976 PHF21AQ96BD5 680 aa12.58□□□□□ -0.4
SKA2-209ENST00000583976 R3HDM4Q96D70 268 aa12.58□□□□□ -0.4
SKA2-209ENST00000583976 ETAA1Q9NY74 926 aa12.58□□□□□ -0.4
SKA2-209ENST00000583976 LINC00312Q9Y6C7 94 aa12.58□□□□□ -0.4
SKA2-209ENST00000583976 hCG_1809904A0A1W2PP81 198 aa12.57□□□□□ -0.4
SKA2-209ENST00000583976 A0A1W2PPE2 198 aa12.57□□□□□ -0.4
SKA2-209ENST00000583976 A0A1W2PR64 198 aa12.57□□□□□ -0.4
SKA2-209ENST00000583976 A0A1W2PRV1 198 aa12.57□□□□□ -0.4
SKA2-209ENST00000583976 C17orf98A8MV24 154 aa12.57□□□□□ -0.4
SKA2-209ENST00000583976 VGLL3A8MV65 326 aa12.57□□□□□ -0.4
SKA2-209ENST00000583976 GABARAPO95166 117 aa12.57□□□□□ -0.4
SKA2-209ENST00000583976 IL1AP01583 271 aa12.57□□□□□ -0.4
SKA2-209ENST00000583976 CHATP28329 748 aa12.57□□□□□ -0.4
SKA2-209ENST00000583976 GLP1RP43220 463 aa12.57□□□□□ -0.4
SKA2-209ENST00000583976 KCNJ3P48549 501 aa12.57□□□□□ -0.4
SKA2-209ENST00000583976 SSX2Q16385 188 aa12.57□□□□□ -0.4
SKA2-209ENST00000583976 CTF1Q16619 201 aa12.57□□□□□ -0.4
SKA2-209ENST00000583976 OR13A1Q8NGR1 328 aa12.57□□□□□ -0.4
SKA2-209ENST00000583976 MRGPRDQ8TDS7 321 aa12.57□□□□□ -0.4
SKA2-209ENST00000583976 FAAP24Q9BTP7 215 aa12.57□□□□□ -0.4
SKA2-209ENST00000583976 UBE2J1Q9Y385 318 aaPredicted RBP12.57□□□□□ -0.4
SKA2-209ENST00000583976 A0A1W2PRX2 142 aa12.56□□□□□ -0.4
SKA2-209ENST00000583976 TMEM30CPA0ZSE6 113 aa12.56□□□□□ -0.4
SKA2-209ENST00000583976 H3BUI4 141 aa12.56□□□□□ -0.4
SKA2-209ENST00000583976 ZNF626Q68DY1 528 aa12.56□□□□□ -0.4
SKA2-209ENST00000583976 REC114Q7Z4M0 266 aa12.56□□□□□ -0.4
SKA2-209ENST00000583976 FAM89BQ8N5H3 189 aa12.56□□□□□ -0.4
SKA2-209ENST00000583976 ZNF565Q8N9K5 539 aa12.56□□□□□ -0.4
SKA2-209ENST00000583976 OR5H6Q8NGV6 325 aa12.56□□□□□ -0.4
SKA2-209ENST00000583976 OR4K15Q8NH41 348 aa12.56□□□□□ -0.4
SKA2-209ENST00000583976 LGALS14Q8TCE9 139 aa12.56□□□□□ -0.4
SKA2-209ENST00000583976 CORO2AQ92828 525 aa12.56□□□□□ -0.4
SKA2-209ENST00000583976 SULT4A1Q9BR01 284 aa12.56□□□□□ -0.4
SKA2-209ENST00000583976 ATG5Q9H1Y0 275 aa12.56□□□□□ -0.4
SKA2-209ENST00000583976 NECAP2Q9NVZ3 263 aa12.56□□□□□ -0.4
SKA2-209ENST00000583976 PLEKHJ1Q9NW61 149 aa12.56□□□□□ -0.4
SKA2-209ENST00000583976 OR6C3Q9NZP0 311 aa12.56□□□□□ -0.4
SKA2-209ENST00000583976 NBEAL2Q6ZNJ1 2754 aa12.55□□□□□ -0.4
SKA2-209ENST00000583976 MMP23AO75900 390 aa12.55□□□□□ -0.4
SKA2-209ENST00000583976 MT-ND4P03905 459 aa12.55□□□□□ -0.4
SKA2-209ENST00000583976 RAB6AP20340 208 aa12.55□□□□□ -0.4
SKA2-209ENST00000583976 TMEM50BP56557 158 aa12.55□□□□□ -0.4
SKA2-209ENST00000583976 DYNC1I2Q13409 638 aaKnown RBP12.55□□□□□ -0.4
SKA2-209ENST00000583976 MOGAT2Q3SYC2 334 aa12.55□□□□□ -0.4
SKA2-209ENST00000583976 PRAMEF5Q5TYX0 476 aa12.55□□□□□ -0.4
SKA2-209ENST00000583976 ZNF497Q6ZNH5 498 aa12.55□□□□□ -0.4
SKA2-209ENST00000583976 NDUFA11Q86Y39 141 aa12.55□□□□□ -0.4
SKA2-209ENST00000583976 OR56B1Q8NGI3 324 aa12.55□□□□□ -0.4
SKA2-209ENST00000583976 NDNFQ8TB73 568 aa12.55□□□□□ -0.4
SKA2-209ENST00000583976 ARHGAP5-AS1Q96IT6 56 aa12.55□□□□□ -0.4
SKA2-209ENST00000583976 WNT10AQ9GZT5 417 aa12.55□□□□□ -0.4
SKA2-209ENST00000583976 GAL3ST2Q9H3Q3 398 aa12.55□□□□□ -0.4
SKA2-209ENST00000583976 ABCB10Q9NRK6 738 aa12.55□□□□□ -0.4
SKA2-209ENST00000583976 TRAPPC2LQ9UL33 140 aa12.55□□□□□ -0.4
SKA2-209ENST00000583976 TBL2Q9Y4P3 447 aaKnown RBP12.55□□□□□ -0.4
SKA2-209ENST00000583976 A0A075B6Q4 140 aa12.54□□□□□ -0.4
SKA2-209ENST00000583976 METTL21EPA6NDL7 271 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 169.8 ms