RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 STK17BO94768 372 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 SFT2D2O95562 160 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 ACTL6AO96019 429 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 HLA-AP01891 365 aaKnown RBP3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 APODP05090 189 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 FCER2P06734 321 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 RNH1P13489 461 aaKnown RBP3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 PGAM2P15259 253 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 FCARP24071 287 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 CRABP1P29762 137 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 DUTP33316 252 aaKnown RBP3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 ALDH3B1P43353 468 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 SULT1A2P50226 295 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 ARHGDIBP52566 201 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 RIDAP52758 137 aaKnown RBP3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 POLR2GP62487 172 aaKnown RBP eCLIP3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 FAM3AP98173 230 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 ECH1Q13011 328 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 PPP1R1AQ13522 171 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 FAM53BQ14153 422 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 SGCAQ16586 387 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 PDLIM3Q53GG5 364 aaPredicted RBP3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 ACTBL2Q562R1 376 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 RNASE10Q5GAN6 216 aaKnown RBP3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 FAM74A1Q5RGS3 127 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 PHYHD1Q5SRE7 291 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 EIF5AL1Q6IS14 154 aaKnown RBP3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 H3F3CQ6NXT2 135 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 C5orf46Q6UWT4 87 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 PRSS41Q7RTY9 318 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 CPEB2Q7Z5Q1 589 aaKnown RBP3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 TMED4Q7Z7H5 227 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 LHFPL1Q86WI0 220 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 ANGPTL5Q86XS5 388 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 CACUL1Q86Y37 369 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 FAM89BQ8N5H3 189 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 ARRDC1Q8N5I2 433 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 COMMD1Q8N668 190 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 CSNK1A1LQ8N752 337 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 OR4K17Q8NGC6 315 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 OR5T3Q8NGG3 340 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 OR51A4Q8NGJ6 313 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 OR6N2Q8NGY6 317 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 OR8K3Q8NH51 312 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 PHOSPHO2Q8TCD6 241 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 RXFP4Q8TDU9 374 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 DOK4Q8TEW6 326 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 TSEN15Q8WW01 171 aaKnown RBP3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 ING5Q8WYH8 240 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 TMEM45BQ96B21 275 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 MALSU1Q96EH3 234 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 SLC25A44Q96H78 314 aaPredicted RBP3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 C2orf50Q96LR7 162 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 ZNF75AQ96N20 296 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 ZNF285Q96NJ3 590 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 RAB40CQ96S21 281 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 GABRG3Q99928 467 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 NRIP2Q9BQI9 281 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 SCRT1Q9BWW7 348 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 MRPL13Q9BYD1 178 aaKnown RBP3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 ULBP3Q9BZM4 244 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 CHRNA10Q9GZZ6 450 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 SLC26A1Q9H2B4 701 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 ARV1Q9H2C2 271 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 TXNIPQ9H3M7 391 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 SMDT1Q9H4I9 107 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 PARP11Q9NR21 331 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 PRTFDC1Q9NRG1 225 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 SMCO4Q9NRQ5 59 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 CUTCQ9NTM9 273 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 MRPL22Q9NWU5 206 aaKnown RBP3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 HRASLS2Q9NWW9 162 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 CKLFQ9UBR5 152 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 PISDQ9UG56 409 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 PRO0461Q9UI25 63 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 OR52A1Q9UKL2 312 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 SLC22A13Q9Y226 551 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 STARD10Q9Y365 291 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 NOP16Q9Y3C1 178 aaKnown RBP3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 OR10H1Q9Y4A9 318 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 WIF1Q9Y5W5 379 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 R4GMQ9 66 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 R4GN57 208 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 MYO10Q9HD67 2058 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 COL6A3P12111 3177 aa3.14□□□□□ -1.91
SMCHD1-208ENST00000583344 A0A1B0GW64 132 aa3.13□□□□□ -1.91
SMCHD1-208ENST00000583344 MEIS3P1A6NDR6 274 aa3.13□□□□□ -1.91
SMCHD1-208ENST00000583344 FRG2CA6NGY1 282 aa3.13□□□□□ -1.91
SMCHD1-208ENST00000583344 A6NIZ1 184 aa3.13□□□□□ -1.91
SMCHD1-208ENST00000583344 PCP4L1A6NKN8 68 aa3.13□□□□□ -1.91
SMCHD1-208ENST00000583344 ZNF732B4DXR9 585 aa3.13□□□□□ -1.91
SMCHD1-208ENST00000583344 PLPP3O14495 311 aa3.13□□□□□ -1.91
SMCHD1-208ENST00000583344 XKRYO14609 159 aa3.13□□□□□ -1.91
SMCHD1-208ENST00000583344 OR2T1O43869 369 aa3.13□□□□□ -1.91
SMCHD1-208ENST00000583344 FADS1O60427 444 aa3.13□□□□□ -1.91
SMCHD1-208ENST00000583344 TSPAN2O60636 221 aa3.13□□□□□ -1.91
SMCHD1-208ENST00000583344 RHBDL1O75783 438 aa3.13□□□□□ -1.91
SMCHD1-208ENST00000583344 EIF3GO75821 320 aaKnown RBP eCLIP3.13□□□□□ -1.91
SMCHD1-208ENST00000583344 UTS2O95399 124 aa3.13□□□□□ -1.91
SMCHD1-208ENST00000583344 NSA2O95478 260 aaKnown RBP3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms