RNA–Protein interactions for RNA: ENST00000582892.1

NF1-222, Transcript of neurofibromin 1, human

TSL 4

Gene NF1, Length 462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NF1-222	ENST00000582892	IGKV3D-15	A0A087WSY6	115 aa		6.23	□□□□□ -1.41
NF1-222	ENST00000582892	C5orf51	A6NDU8	294 aa		6.23	□□□□□ -1.41
NF1-222	ENST00000582892	MPTX1	A8MV57	137 aa		6.23	□□□□□ -1.41
NF1-222	ENST00000582892		F5H0A9	414 aa	Predicted RBP	6.23	□□□□□ -1.41
NF1-222	ENST00000582892		F5H5K5	113 aa		6.23	□□□□□ -1.41
NF1-222	ENST00000582892	ABCD4	O14678	606 aa		6.23	□□□□□ -1.41
NF1-222	ENST00000582892	XRCC2	O43543	280 aa		6.23	□□□□□ -1.41
NF1-222	ENST00000582892	CYTIP	O60759	359 aa		6.23	□□□□□ -1.41
NF1-222	ENST00000582892	SS18L1	O75177	396 aa	Predicted RBP	6.23	□□□□□ -1.41
NF1-222	ENST00000582892	MED14OS	P0DP75	135 aa		6.23	□□□□□ -1.41
NF1-222	ENST00000582892	COX5B	P10606	129 aa		6.23	□□□□□ -1.41
NF1-222	ENST00000582892	RPS2	P15880	293 aa	Known RBP	6.23	□□□□□ -1.41
NF1-222	ENST00000582892	FAH	P16930	419 aa		6.23	□□□□□ -1.41
NF1-222	ENST00000582892	LUM	P51884	338 aa	Predicted RBP	6.23	□□□□□ -1.41
NF1-222	ENST00000582892	FUT6	P51993	359 aa		6.23	□□□□□ -1.41
NF1-222	ENST00000582892	SNU13	P55769	128 aa	Known RBP	6.23	□□□□□ -1.41
NF1-222	ENST00000582892	CARD18	P57730	90 aa		6.23	□□□□□ -1.41
NF1-222	ENST00000582892	SUPT4H1	P63272	117 aa	Known RBP	6.23	□□□□□ -1.41
NF1-222	ENST00000582892	P2RY6	Q15077	328 aa		6.23	□□□□□ -1.41
NF1-222	ENST00000582892	SRSF7	Q16629	238 aa	Known RBP eCLIP	6.23	□□□□□ -1.41
NF1-222	ENST00000582892	ELP2	Q6IA86	826 aa		6.23	□□□□□ -1.41
NF1-222	ENST00000582892	EIF5AL1	Q6IS14	154 aa	Known RBP	6.23	□□□□□ -1.41
NF1-222	ENST00000582892	DHRS11	Q6UWP2	260 aa		6.23	□□□□□ -1.41
NF1-222	ENST00000582892		Q6ZS49	121 aa		6.23	□□□□□ -1.41
NF1-222	ENST00000582892	KCTD9	Q7L273	389 aa		6.23	□□□□□ -1.41
NF1-222	ENST00000582892	NUFIP2	Q7Z417	695 aa	Known RBP	6.23	□□□□□ -1.41
NF1-222	ENST00000582892	GGN	Q86UU5	652 aa		6.23	□□□□□ -1.41
NF1-222	ENST00000582892	BAP18	Q8IXM2	172 aa		6.23	□□□□□ -1.41
NF1-222	ENST00000582892	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	6.23	□□□□□ -1.41
NF1-222	ENST00000582892	POC1A	Q8NBT0	407 aa		6.23	□□□□□ -1.41
NF1-222	ENST00000582892		Q8NFD4	153 aa		6.23	□□□□□ -1.41
NF1-222	ENST00000582892	CASTOR1	Q8WTX7	329 aa		6.23	□□□□□ -1.41
NF1-222	ENST00000582892	FAM216A	Q8WUB2	273 aa		6.23	□□□□□ -1.41
NF1-222	ENST00000582892	PCNP	Q8WW12	178 aa	Known RBP	6.23	□□□□□ -1.41
NF1-222	ENST00000582892	MARC2	Q969Z3	335 aa		6.23	□□□□□ -1.41
NF1-222	ENST00000582892	CPNE4	Q96A23	557 aa	Predicted RBP	6.23	□□□□□ -1.41
NF1-222	ENST00000582892	SPSB4	Q96A44	273 aa		6.23	□□□□□ -1.41
NF1-222	ENST00000582892	SGK3	Q96BR1	496 aa		6.23	□□□□□ -1.41
NF1-222	ENST00000582892	FBXO17	Q96EF6	278 aa		6.23	□□□□□ -1.41
NF1-222	ENST00000582892	SAT2	Q96F10	170 aa	Predicted RBP	6.23	□□□□□ -1.41
NF1-222	ENST00000582892	SPACA5	Q96QH8	159 aa		6.23	□□□□□ -1.41
NF1-222	ENST00000582892	ZNF747	Q9BV97	191 aa		6.23	□□□□□ -1.41
NF1-222	ENST00000582892	C1QTNF5	Q9BXJ0	243 aa		6.23	□□□□□ -1.41
NF1-222	ENST00000582892	SRXN1	Q9BYN0	137 aa		6.23	□□□□□ -1.41
NF1-222	ENST00000582892	BPESC1	Q9GZL8	116 aa		6.23	□□□□□ -1.41
NF1-222	ENST00000582892	WDR13	Q9H1Z4	485 aa		6.23	□□□□□ -1.41
NF1-222	ENST00000582892	CBLN4	Q9NTU7	201 aa		6.23	□□□□□ -1.41
NF1-222	ENST00000582892	ZFP57	Q9NU63	452 aa		6.23	□□□□□ -1.41
NF1-222	ENST00000582892	C1orf123	Q9NWV4	160 aa		6.23	□□□□□ -1.41
NF1-222	ENST00000582892	EHF	Q9NZC4	300 aa		6.23	□□□□□ -1.41
NF1-222	ENST00000582892	TMA7	Q9Y2S6	64 aa	Known RBP	6.23	□□□□□ -1.41
NF1-222	ENST00000582892	ZNF175	Q9Y473	711 aa		6.23	□□□□□ -1.41
NF1-222	ENST00000582892	DNAH3	Q8TD57	4116 aa		6.23	□□□□□ -1.41
NF1-222	ENST00000582892	DYNC2H1	Q8NCM8	4307 aa	Known RBP	6.23	□□□□□ -1.41
NF1-222	ENST00000582892	FAM25E	A8MYX2	175 aa		6.22	□□□□□ -1.41
NF1-222	ENST00000582892	RPL36A-HNRNPH2	H7BZ11	118 aa		6.22	□□□□□ -1.41
NF1-222	ENST00000582892	CCS	O14618	274 aa		6.22	□□□□□ -1.41
NF1-222	ENST00000582892	TNFSF11	O14788	317 aa		6.22	□□□□□ -1.41
NF1-222	ENST00000582892	GAPDH	P04406	335 aa	Known RBP	6.22	□□□□□ -1.41
NF1-222	ENST00000582892	CD79A	P11912	226 aa		6.22	□□□□□ -1.41
NF1-222	ENST00000582892	ANOS1	P23352	680 aa		6.22	□□□□□ -1.41
NF1-222	ENST00000582892	CHAT	P28329	748 aa		6.22	□□□□□ -1.41
NF1-222	ENST00000582892	RBP2	P50120	134 aa		6.22	□□□□□ -1.41
NF1-222	ENST00000582892	NPY4R	P50391	375 aa		6.22	□□□□□ -1.41
NF1-222	ENST00000582892	EFNA4	P52798	201 aa		6.22	□□□□□ -1.41
NF1-222	ENST00000582892	UCP3	P55916	312 aa		6.22	□□□□□ -1.41
NF1-222	ENST00000582892	SRSF3	P84103	164 aa	Known RBP	6.22	□□□□□ -1.41
NF1-222	ENST00000582892	IL34	Q6ZMJ4	242 aa		6.22	□□□□□ -1.41
NF1-222	ENST00000582892	COLCA1	Q6ZS62	124 aa		6.22	□□□□□ -1.41
NF1-222	ENST00000582892	AAED1	Q7RTV5	226 aa		6.22	□□□□□ -1.41
NF1-222	ENST00000582892	RNF144B	Q7Z419	303 aa		6.22	□□□□□ -1.41
NF1-222	ENST00000582892	C1QL2	Q7Z5L3	287 aa		6.22	□□□□□ -1.41
NF1-222	ENST00000582892	C1QL4	Q86Z23	238 aa		6.22	□□□□□ -1.41
NF1-222	ENST00000582892	SGPP2	Q8IWX5	399 aa		6.22	□□□□□ -1.41
NF1-222	ENST00000582892	SAXO1	Q8IYX7	474 aa		6.22	□□□□□ -1.41
NF1-222	ENST00000582892	SLC38A6	Q8IZM9	456 aa		6.22	□□□□□ -1.41
NF1-222	ENST00000582892	MUC15	Q8N387	334 aa		6.22	□□□□□ -1.41
NF1-222	ENST00000582892	LRTM2	Q8N967	370 aa		6.22	□□□□□ -1.41
NF1-222	ENST00000582892	OR5T2	Q8NGG2	359 aa		6.22	□□□□□ -1.41
NF1-222	ENST00000582892	ARL11	Q969Q4	196 aa		6.22	□□□□□ -1.41
NF1-222	ENST00000582892	GALNT14	Q96FL9	552 aa		6.22	□□□□□ -1.41
NF1-222	ENST00000582892	REEP6	Q96HR9	211 aa		6.22	□□□□□ -1.41
NF1-222	ENST00000582892	SEC22A	Q96IW7	307 aa		6.22	□□□□□ -1.41
NF1-222	ENST00000582892	PIMREG	Q9BSJ6	248 aa		6.22	□□□□□ -1.41
NF1-222	ENST00000582892	OR2H1	Q9GZK4	316 aa		6.22	□□□□□ -1.41
NF1-222	ENST00000582892	BCO1	Q9HAY6	547 aa		6.22	□□□□□ -1.41
NF1-222	ENST00000582892	CYTL1	Q9NRR1	136 aa		6.22	□□□□□ -1.41
NF1-222	ENST00000582892	NECAP2	Q9NVZ3	263 aa		6.22	□□□□□ -1.41
NF1-222	ENST00000582892	PLEKHJ1	Q9NW61	149 aa		6.22	□□□□□ -1.41
NF1-222	ENST00000582892	ANXA10	Q9UJ72	324 aa		6.22	□□□□□ -1.41
NF1-222	ENST00000582892	SACS	Q9NZJ4	4579 aa		6.22	□□□□□ -1.41
NF1-222	ENST00000582892	DNAH9	Q9NYC9	4486 aa		6.21	□□□□□ -1.41
NF1-222	ENST00000582892	ARHGAP32	A7KAX9	2087 aa		6.21	□□□□□ -1.41
NF1-222	ENST00000582892	LOC100509620	A0A075B734	347 aa		6.21	□□□□□ -1.42
NF1-222	ENST00000582892	ZNF816-ZNF321P	A0A0X1KG74	233 aa		6.21	□□□□□ -1.42
NF1-222	ENST00000582892	hCG_38984	A0A1B0GV85	526 aa		6.21	□□□□□ -1.42
NF1-222	ENST00000582892	C13orf42	A0A1B0GVH6	325 aa		6.21	□□□□□ -1.42
NF1-222	ENST00000582892		A0A1W2PP11	408 aa		6.21	□□□□□ -1.42
NF1-222	ENST00000582892	C5orf63	A6NC05	138 aa		6.21	□□□□□ -1.42
NF1-222	ENST00000582892	CRYM-AS1	A6NIL9	109 aa		6.21	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms