RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 RNF212BA8MTL3 300 aa7.81□□□□□ -1.16
SS18-220ENST00000582092 HMSDA8MTL9 139 aa7.81□□□□□ -1.16
SS18-220ENST00000582092 SRRM5B3KS81 715 aa7.81□□□□□ -1.16
SS18-220ENST00000582092 HSD17B6O14756 317 aa7.81□□□□□ -1.16
SS18-220ENST00000582092 MPPED1O15442 326 aa7.81□□□□□ -1.16
SS18-220ENST00000582092 ARPC5O15511 151 aa7.81□□□□□ -1.16
SS18-220ENST00000582092 PHF1O43189 567 aaPredicted RBP7.81□□□□□ -1.16
SS18-220ENST00000582092 IFNA7P01567 189 aa7.81□□□□□ -1.16
SS18-220ENST00000582092 IGHV1-46P01743 117 aa7.81□□□□□ -1.16
SS18-220ENST00000582092 THBDP07204 575 aa7.81□□□□□ -1.16
SS18-220ENST00000582092 RCC1P18754 421 aaPredicted RBP7.81□□□□□ -1.16
SS18-220ENST00000582092 LMO1P25800 156 aa7.81□□□□□ -1.16
SS18-220ENST00000582092 APOBEC3AP31941 199 aaPredicted RBP7.81□□□□□ -1.16
SS18-220ENST00000582092 CEACAM6P40199 344 aa7.81□□□□□ -1.16
SS18-220ENST00000582092 GATA4P43694 442 aa7.81□□□□□ -1.16
SS18-220ENST00000582092 CEBPDP49716 269 aaPredicted RBP7.81□□□□□ -1.16
SS18-220ENST00000582092 H2BFSP57053 126 aa7.81□□□□□ -1.16
SS18-220ENST00000582092 EDDM3AQ14507 147 aa7.81□□□□□ -1.16
SS18-220ENST00000582092 DAZAP2Q15038 168 aaPredicted RBP7.81□□□□□ -1.16
SS18-220ENST00000582092 TESK1Q15569 626 aa7.81□□□□□ -1.16
SS18-220ENST00000582092 C2orf68Q2NKX9 166 aa7.81□□□□□ -1.16
SS18-220ENST00000582092 LRRC37A5PQ49AS3 106 aa7.81□□□□□ -1.16
SS18-220ENST00000582092 BEX5Q5H9J7 111 aa7.81□□□□□ -1.16
SS18-220ENST00000582092 NCMAPQ5T1S8 102 aa7.81□□□□□ -1.16
SS18-220ENST00000582092 ZNF767PQ75MW2 155 aa7.81□□□□□ -1.16
SS18-220ENST00000582092 ZNF695Q8IW36 515 aa7.81□□□□□ -1.16
SS18-220ENST00000582092 C9orf62Q8N4C0 152 aa7.81□□□□□ -1.16
SS18-220ENST00000582092 RNASE11Q8TAA1 199 aaKnown RBP7.81□□□□□ -1.16
SS18-220ENST00000582092 LINC01560Q8TB33 94 aa7.81□□□□□ -1.16
SS18-220ENST00000582092 PLPPR1Q8TBJ4 325 aa7.81□□□□□ -1.16
SS18-220ENST00000582092 SNX22Q96L94 193 aa7.81□□□□□ -1.16
SS18-220ENST00000582092 C2orf50Q96LR7 162 aa7.81□□□□□ -1.16
SS18-220ENST00000582092 RSRP1Q9BUV0 290 aa7.81□□□□□ -1.16
SS18-220ENST00000582092 NMES1Q9C002 83 aa7.81□□□□□ -1.16
SS18-220ENST00000582092 MFFQ9GZY8 342 aa7.81□□□□□ -1.16
SS18-220ENST00000582092 TAF9BQ9HBM6 251 aa7.81□□□□□ -1.16
SS18-220ENST00000582092 SLC2A9Q9NRM0 540 aa7.81□□□□□ -1.16
SS18-220ENST00000582092 PLSCR3Q9NRY6 295 aa7.81□□□□□ -1.16
SS18-220ENST00000582092 ZFP57Q9NU63 452 aa7.81□□□□□ -1.16
SS18-220ENST00000582092 PIPOXQ9P0Z9 390 aa7.81□□□□□ -1.16
SS18-220ENST00000582092 KIF25Q9UIL4 384 aa7.81□□□□□ -1.16
SS18-220ENST00000582092 KCNS2Q9ULS6 477 aa7.81□□□□□ -1.16
SS18-220ENST00000582092 OR2W1Q9Y3N9 320 aa7.81□□□□□ -1.16
SS18-220ENST00000582092 IGHV3OR15-7A0A075B7D8 119 aa7.8□□□□□ -1.16
SS18-220ENST00000582092 TRAV39A0A0B4J263 110 aa7.8□□□□□ -1.16
SS18-220ENST00000582092 A0A0D9SG52 128 aa7.8□□□□□ -1.16
SS18-220ENST00000582092 C17orf100A8MU93 164 aa7.8□□□□□ -1.16
SS18-220ENST00000582092 MGST3O14880 152 aa7.8□□□□□ -1.16
SS18-220ENST00000582092 B3GALNT1O75752 331 aa7.8□□□□□ -1.16
SS18-220ENST00000582092 ZNF205O95201 554 aa7.8□□□□□ -1.16
SS18-220ENST00000582092 PTBP3O95758 552 aaKnown RBP7.8□□□□□ -1.16
SS18-220ENST00000582092 PSG2P11465 335 aa7.8□□□□□ -1.16
SS18-220ENST00000582092 GZMHP20718 246 aa7.8□□□□□ -1.16
SS18-220ENST00000582092 PSMB6P28072 239 aa7.8□□□□□ -1.16
SS18-220ENST00000582092 GNRHRP30968 328 aa7.8□□□□□ -1.16
SS18-220ENST00000582092 AP2S1P53680 142 aaPredicted RBP7.8□□□□□ -1.16
SS18-220ENST00000582092 EDDM3BP56851 147 aa7.8□□□□□ -1.16
SS18-220ENST00000582092 RAB14P61106 215 aa7.8□□□□□ -1.16
SS18-220ENST00000582092 AESQ08117 197 aa7.8□□□□□ -1.16
SS18-220ENST00000582092 OPCMLQ14982 345 aa7.8□□□□□ -1.16
SS18-220ENST00000582092 ADIPOQQ15848 244 aa7.8□□□□□ -1.16
SS18-220ENST00000582092 LGALSLQ3ZCW2 172 aaPredicted RBP7.8□□□□□ -1.16
SS18-220ENST00000582092 DCAF12L2Q5VW00 463 aa7.8□□□□□ -1.16
SS18-220ENST00000582092 ZNF660Q6AZW8 331 aaPredicted RBP7.8□□□□□ -1.16
SS18-220ENST00000582092 THOC7Q6I9Y2 204 aaKnown RBP7.8□□□□□ -1.16
SS18-220ENST00000582092 ZNF880Q6PDB4 577 aa7.8□□□□□ -1.16
SS18-220ENST00000582092 C22orf34Q6ZV56 151 aa7.8□□□□□ -1.16
SS18-220ENST00000582092 OR10V1Q8NGI7 309 aa7.8□□□□□ -1.16
SS18-220ENST00000582092 TMEM230Q96A57 120 aa7.8□□□□□ -1.16
SS18-220ENST00000582092 WDR89Q96FK6 387 aaPredicted RBP7.8□□□□□ -1.16
SS18-220ENST00000582092 CYYR1Q96J86 154 aa7.8□□□□□ -1.16
SS18-220ENST00000582092 SEBOXQ9HB31 216 aaPredicted RBP7.8□□□□□ -1.16
SS18-220ENST00000582092 RDH8Q9NYR8 311 aa7.8□□□□□ -1.16
SS18-220ENST00000582092 RNF115Q9Y4L5 304 aa7.8□□□□□ -1.16
SS18-220ENST00000582092 TRBV6-7A0A0A0MS04 114 aa7.79□□□□□ -1.16
SS18-220ENST00000582092 TRAV38-1A0A0B4J264 116 aa7.79□□□□□ -1.16
SS18-220ENST00000582092 C3orf85A0A1B0GTC6 90 aa7.79□□□□□ -1.16
SS18-220ENST00000582092 KANTRA0A1W2PQU2 76 aa7.79□□□□□ -1.16
SS18-220ENST00000582092 B9A039 149 aa7.79□□□□□ -1.16
SS18-220ENST00000582092 C3orf80F5H4A9 247 aa7.79□□□□□ -1.16
SS18-220ENST00000582092 RGS13O14921 159 aa7.79□□□□□ -1.16
SS18-220ENST00000582092 RP2O75695 350 aa7.79□□□□□ -1.16
SS18-220ENST00000582092 CD8AP01732 235 aa7.79□□□□□ -1.16
SS18-220ENST00000582092 SERPINE2P07093 398 aa7.79□□□□□ -1.16
SS18-220ENST00000582092 OR5AC1P0C628 307 aa7.79□□□□□ -1.16
SS18-220ENST00000582092 MUC1P15941 1255 aaPredicted RBP7.79□□□□□ -1.16
SS18-220ENST00000582092 ZNF16P17020 682 aaPredicted RBP7.79□□□□□ -1.16
SS18-220ENST00000582092 S100A11P31949 105 aa7.79□□□□□ -1.16
SS18-220ENST00000582092 CD80P33681 288 aa7.79□□□□□ -1.16
SS18-220ENST00000582092 OR3A1P47881 315 aa7.79□□□□□ -1.16
SS18-220ENST00000582092 S100A10P60903 97 aa7.79□□□□□ -1.16
SS18-220ENST00000582092 RND3P61587 244 aa7.79□□□□□ -1.16
SS18-220ENST00000582092 CCL8P80075 99 aa7.79□□□□□ -1.16
SS18-220ENST00000582092 SRSF4Q08170 494 aaKnown RBP7.79□□□□□ -1.16
SS18-220ENST00000582092 SNTB1Q13884 538 aaKnown RBP7.79□□□□□ -1.16
SS18-220ENST00000582092 MSMPQ1L6U9 139 aa7.79□□□□□ -1.16
SS18-220ENST00000582092 ANKRD55Q3KP44 614 aa7.79□□□□□ -1.16
SS18-220ENST00000582092 SP6Q3SY56 376 aa7.79□□□□□ -1.16
SS18-220ENST00000582092 FAM209AQ5JX71 171 aa7.79□□□□□ -1.16
SS18-220ENST00000582092 C11orf87Q6NUJ2 197 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms