RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 HLA-DRB3P79483 266 aa11.74□□□□□ -0.53
SKA2-205ENST00000580541 GUCA2AQ02747 115 aa11.74□□□□□ -0.53
SKA2-205ENST00000580541 HMGN3Q15651 99 aa11.74□□□□□ -0.53
SKA2-205ENST00000580541 RTN4RL2Q86UN3 420 aa11.74□□□□□ -0.53
SKA2-205ENST00000580541 Q8N402 240 aa11.74□□□□□ -0.53
SKA2-205ENST00000580541 PRR18Q8N4B5 295 aa11.74□□□□□ -0.53
SKA2-205ENST00000580541 SMIM4Q8WVI0 70 aa11.74□□□□□ -0.53
SKA2-205ENST00000580541 WDR12Q9GZL7 423 aaKnown RBP11.74□□□□□ -0.53
SKA2-205ENST00000580541 MTFP1Q9UDX5 166 aa11.74□□□□□ -0.53
SKA2-205ENST00000580541 ZNF230Q9UIE0 474 aaPredicted RBP11.74□□□□□ -0.53
SKA2-205ENST00000580541 ELF5Q9UKW6 265 aaPredicted RBP11.74□□□□□ -0.53
SKA2-205ENST00000580541 SESN1Q9Y6P5 492 aa11.74□□□□□ -0.53
SKA2-205ENST00000580541 TRAV39A0A0B4J263 110 aa11.73□□□□□ -0.53
SKA2-205ENST00000580541 A8MV72 311 aaPredicted RBP11.73□□□□□ -0.53
SKA2-205ENST00000580541 C15orf65H3BRN8 121 aa11.73□□□□□ -0.53
SKA2-205ENST00000580541 F2RL2O00254 374 aa11.73□□□□□ -0.53
SKA2-205ENST00000580541 SDCBPO00560 298 aaPredicted RBP11.73□□□□□ -0.53
SKA2-205ENST00000580541 ZNF16P17020 682 aaPredicted RBP11.73□□□□□ -0.53
SKA2-205ENST00000580541 HNF1AP20823 631 aa11.73□□□□□ -0.53
SKA2-205ENST00000580541 INPP1P49441 399 aa11.73□□□□□ -0.53
SKA2-205ENST00000580541 PRRX1P54821 245 aa11.73□□□□□ -0.53
SKA2-205ENST00000580541 DLX6P56179 175 aa11.73□□□□□ -0.53
SKA2-205ENST00000580541 AP3S2P59780 193 aa11.73□□□□□ -0.53
SKA2-205ENST00000580541 BPIFB3P59826 476 aa11.73□□□□□ -0.53
SKA2-205ENST00000580541 MADCAM1Q13477 382 aa11.73□□□□□ -0.53
SKA2-205ENST00000580541 ZNF846Q147U1 533 aa11.73□□□□□ -0.53
SKA2-205ENST00000580541 C17orf58Q2M2W7 97 aa11.73□□□□□ -0.53
SKA2-205ENST00000580541 Q3ZCU0 254 aa11.73□□□□□ -0.53
SKA2-205ENST00000580541 ACTBL2Q562R1 376 aa11.73□□□□□ -0.53
SKA2-205ENST00000580541 OR52I2Q8NH67 350 aa11.73□□□□□ -0.53
SKA2-205ENST00000580541 OR10J5Q8NHC4 309 aa11.73□□□□□ -0.53
SKA2-205ENST00000580541 RFESDQ8TAC1 157 aa11.73□□□□□ -0.53
SKA2-205ENST00000580541 IL1F10Q8WWZ1 152 aa11.73□□□□□ -0.53
SKA2-205ENST00000580541 PCGF1Q9BSM1 259 aa11.73□□□□□ -0.53
SKA2-205ENST00000580541 THAP7Q9BT49 309 aaPredicted RBP11.73□□□□□ -0.53
SKA2-205ENST00000580541 SIRPDQ9H106 197 aa11.73□□□□□ -0.53
SKA2-205ENST00000580541 OR2S2Q9NQN1 319 aa11.73□□□□□ -0.53
SKA2-205ENST00000580541 YAE1D1Q9NRH1 226 aa11.73□□□□□ -0.53
SKA2-205ENST00000580541 NECAP2Q9NVZ3 263 aa11.73□□□□□ -0.53
SKA2-205ENST00000580541 GNG12Q9UBI6 72 aa11.73□□□□□ -0.53
SKA2-205ENST00000580541 ANXA10Q9UJ72 324 aa11.73□□□□□ -0.53
SKA2-205ENST00000580541 JPT1Q9UK76 154 aa11.73□□□□□ -0.53
SKA2-205ENST00000580541 CSPG4Q6UVK1 2322 aa11.72□□□□□ -0.53
SKA2-205ENST00000580541 VPS13CQ709C8 3753 aa11.72□□□□□ -0.53
SKA2-205ENST00000580541 MEIOCA2RUB1 952 aa11.72□□□□□ -0.53
SKA2-205ENST00000580541 TOR1AO14656 332 aa11.72□□□□□ -0.53
SKA2-205ENST00000580541 CSF1P09603 554 aa11.72□□□□□ -0.53
SKA2-205ENST00000580541 PTHLHP12272 177 aa11.72□□□□□ -0.53
SKA2-205ENST00000580541 NAT1P18440 290 aa11.72□□□□□ -0.53
SKA2-205ENST00000580541 TBPP20226 339 aa11.72□□□□□ -0.53
SKA2-205ENST00000580541 NFYBP25208 207 aa11.72□□□□□ -0.53
SKA2-205ENST00000580541 SSTR5P35346 364 aa11.72□□□□□ -0.53
SKA2-205ENST00000580541 TCF23Q7RTU1 214 aa11.72□□□□□ -0.53
SKA2-205ENST00000580541 VMO1Q7Z5L0 202 aa11.72□□□□□ -0.53
SKA2-205ENST00000580541 OR5AP2Q8NGF4 316 aa11.72□□□□□ -0.53
SKA2-205ENST00000580541 NANPQ8TBE9 248 aa11.72□□□□□ -0.53
SKA2-205ENST00000580541 CREB3L1Q96BA8 519 aa11.72□□□□□ -0.53
SKA2-205ENST00000580541 GINS4Q9BRT9 223 aa11.72□□□□□ -0.53
SKA2-205ENST00000580541 TMEM133Q9H2Q1 129 aa11.72□□□□□ -0.53
SKA2-205ENST00000580541 TMEM160Q9NX00 188 aa11.72□□□□□ -0.53
SKA2-205ENST00000580541 V9GYH0 126 aa11.72□□□□□ -0.53
SKA2-205ENST00000580541 FLNAP21333 2647 aaKnown RBP11.72□□□□□ -0.53
SKA2-205ENST00000580541 MEX3AA1L020 520 aaKnown RBP11.71□□□□□ -0.53
SKA2-205ENST00000580541 MEIS3P1A6NDR6 274 aa11.71□□□□□ -0.53
SKA2-205ENST00000580541 ZNF736B4DX44 427 aaPredicted RBP11.71□□□□□ -0.53
SKA2-205ENST00000580541 YPEL1O60688 119 aa11.71□□□□□ -0.53
SKA2-205ENST00000580541 IFNA6P05013 189 aa11.71□□□□□ -0.53
SKA2-205ENST00000580541 SCTP09683 121 aa11.71□□□□□ -0.53
SKA2-205ENST00000580541 GSTT2P0CG29 244 aa11.71□□□□□ -0.53
SKA2-205ENST00000580541 CD40LGP29965 261 aa11.71□□□□□ -0.53
SKA2-205ENST00000580541 TAS2R19P59542 299 aa11.71□□□□□ -0.53
SKA2-205ENST00000580541 SCGB2A2Q13296 93 aa11.71□□□□□ -0.53
SKA2-205ENST00000580541 LY6G6FQ5SQ64 297 aa11.71□□□□□ -0.53
SKA2-205ENST00000580541 PRAMEF5Q5TYX0 476 aa11.71□□□□□ -0.53
SKA2-205ENST00000580541 GPR157Q5UAW9 335 aa11.71□□□□□ -0.53
SKA2-205ENST00000580541 CLEC9AQ6UXN8 241 aa11.71□□□□□ -0.53
SKA2-205ENST00000580541 C11orf42Q8N5U0 333 aa11.71□□□□□ -0.53
SKA2-205ENST00000580541 GVQW1Q8N7I0 195 aa11.71□□□□□ -0.53
SKA2-205ENST00000580541 Q8N7P7 452 aa11.71□□□□□ -0.53
SKA2-205ENST00000580541 TMEM229BQ8NBD8 167 aa11.71□□□□□ -0.53
SKA2-205ENST00000580541 OR5H2Q8NGV7 314 aa11.71□□□□□ -0.53
SKA2-205ENST00000580541 OR1L1Q8NH94 360 aa11.71□□□□□ -0.53
SKA2-205ENST00000580541 ZNF596Q8TC21 504 aa11.71□□□□□ -0.53
SKA2-205ENST00000580541 FAM216AQ8WUB2 273 aa11.71□□□□□ -0.53
SKA2-205ENST00000580541 EDARADDQ8WWZ3 215 aa11.71□□□□□ -0.53
SKA2-205ENST00000580541 DEDD2Q8WXF8 326 aa11.71□□□□□ -0.53
SKA2-205ENST00000580541 TNFRSF14Q92956 283 aa11.71□□□□□ -0.53
SKA2-205ENST00000580541 UPRTQ96BW1 309 aa11.71□□□□□ -0.53
SKA2-205ENST00000580541 KIRREL1Q96J84 757 aa11.71□□□□□ -0.53
SKA2-205ENST00000580541 YPEL2Q96QA6 119 aa11.71□□□□□ -0.53
SKA2-205ENST00000580541 TMPRSS13Q9BYE2 586 aa11.71□□□□□ -0.53
SKA2-205ENST00000580541 GHITMQ9H3K2 345 aa11.71□□□□□ -0.53
SKA2-205ENST00000580541 GFOD1Q9NXC2 390 aa11.71□□□□□ -0.53
SKA2-205ENST00000580541 KLK11Q9UBX7 282 aa11.71□□□□□ -0.53
SKA2-205ENST00000580541 ANAPC10Q9UM13 185 aa11.71□□□□□ -0.53
SKA2-205ENST00000580541 A0A087X0M5 115 aa11.7□□□□□ -0.54
SKA2-205ENST00000580541 A0A1B0GX30 115 aa11.7□□□□□ -0.54
SKA2-205ENST00000580541 CYSRT1A8MQ03 144 aa11.7□□□□□ -0.54
SKA2-205ENST00000580541 MMP9P14780 707 aa11.7□□□□□ -0.54
SKA2-205ENST00000580541 OMGP23515 440 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms