RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 MANBAO00462 879 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 CNMDO75829 334 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 OR2B3O76000 313 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 CNIH1O95406 144 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 TRBV12-3P01733 135 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 AMBPP02760 352 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 BGLAPP02818 100 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 GIPP09681 153 aaPredicted RBP2.32□□□□□ -2.04
KPNB1-208ENST00000580019 HTR1EP28566 365 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 CCR7P32248 378 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 PMELP40967 661 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 OR3A4PP47883 348 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 ZNF138P52744 262 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 SLC18A1P54219 525 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 CCL23P55773 120 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 RAB4BP61018 213 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 S100A12P80511 92 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 RPL19P84098 196 aaKnown RBP2.32□□□□□ -2.04
KPNB1-208ENST00000580019 PAX8Q06710 450 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 FMODQ06828 376 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 PPP1R1AQ13522 171 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 ZNF235Q14590 738 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 GINS1Q14691 196 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 C16orf72Q14CZ0 275 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 HERPUD1Q15011 391 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 RGNQ15493 299 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 TCEAL5Q5H9L2 206 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 FAM162BQ5T6X4 162 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 HIST2H3PS2Q5TEC6 136 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 ZNF544Q6NX49 715 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 ARL9Q6T311 187 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 FBXW12Q6X9E4 464 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 RFLNAQ6ZTI6 216 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 SLC51BQ86UW2 128 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 OR6V1Q8N148 313 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 LRRC25Q8N386 305 aaPredicted RBP2.32□□□□□ -2.04
KPNB1-208ENST00000580019 MUC15Q8N387 334 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 CLDN22Q8N7P3 220 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 SLC26A10Q8NG04 563 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 OR2V1Q8NHB1 315 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 RXFP4Q8TDU9 374 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 SLC37A2Q8TED4 501 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 EEF1AKMT1Q8WVE0 214 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 ASB17Q8WXJ9 295 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 RDH5Q92781 318 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 TCEAL3Q969E4 200 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 PPCDCQ96CD2 204 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 SNF8Q96H20 258 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 SMIM8Q96KF7 97 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 SIGLEC12Q96PQ1 595 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 DUX3Q96PT4 197 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 QKIQ96PU8 341 aaKnown RBP eCLIP2.32□□□□□ -2.04
KPNB1-208ENST00000580019 NIPSNAP1Q9BPW8 284 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 LRRC61Q9BV99 259 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 SLC25A2Q9BXI2 301 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 PECRQ9BY49 303 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 SLC25A39Q9BZJ4 359 aaPredicted RBP2.32□□□□□ -2.04
KPNB1-208ENST00000580019 POMKQ9H5K3 350 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 ZNF702PQ9H963 129 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 GNB4Q9HAV0 340 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 C19orf12Q9NSK7 152 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 ZNF226Q9NYT6 803 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 KLK13Q9UKR3 277 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 FBXO5Q9UKT4 447 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 TRAPPC4Q9Y296 219 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 HEBP2Q9Y5Z4 205 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 NUP98P52948 1817 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 NFASCO94856 1347 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 ZBED9Q6R2W3 1325 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 NRCAMQ92823 1304 aa2.32□□□□□ -2.04
KPNB1-208ENST00000580019 ROCK2O75116 1388 aaKnown RBP2.32□□□□□ -2.04
KPNB1-208ENST00000580019 SPTAN1Q13813 2472 aaKnown RBP2.32□□□□□ -2.04
KPNB1-208ENST00000580019 IGF2RP11717 2491 aa2.31□□□□□ -2.04
KPNB1-208ENST00000580019 LAMA5O15230 3695 aa2.31□□□□□ -2.04
KPNB1-208ENST00000580019 NBEAQ8NFP9 2946 aa2.31□□□□□ -2.04
KPNB1-208ENST00000580019 A0A0J9YXY3 114 aa2.31□□□□□ -2.04
KPNB1-208ENST00000580019 PGPA6NDG6 321 aa2.31□□□□□ -2.04
KPNB1-208ENST00000580019 FAM183AA6NL82 134 aa2.31□□□□□ -2.04
KPNB1-208ENST00000580019 SHISA9B4DS77 424 aa2.31□□□□□ -2.04
KPNB1-208ENST00000580019 SUPT3HO75486 399 aa2.31□□□□□ -2.04
KPNB1-208ENST00000580019 FOXH1O75593 365 aa2.31□□□□□ -2.04
KPNB1-208ENST00000580019 IGHV3-23P01764 117 aa2.31□□□□□ -2.04
KPNB1-208ENST00000580019 SNRPAP09012 282 aaKnown RBP2.31□□□□□ -2.04
KPNB1-208ENST00000580019 ZDHHC11BP0C7U3 371 aa2.31□□□□□ -2.04
KPNB1-208ENST00000580019 LINC00614P0C842 121 aa2.31□□□□□ -2.04
KPNB1-208ENST00000580019 SPNP16150 400 aa2.31□□□□□ -2.04
KPNB1-208ENST00000580019 GABRR1P24046 479 aa2.31□□□□□ -2.04
KPNB1-208ENST00000580019 ADORA1P30542 326 aa2.31□□□□□ -2.04
KPNB1-208ENST00000580019 CD70P32970 193 aa2.31□□□□□ -2.04
KPNB1-208ENST00000580019 LGALS7P47929 136 aa2.31□□□□□ -2.04
KPNB1-208ENST00000580019 TIMM10P62072 90 aa2.31□□□□□ -2.04
KPNB1-208ENST00000580019 SLC7A9P82251 487 aa2.31□□□□□ -2.04
KPNB1-208ENST00000580019 GTF2BQ00403 316 aa2.31□□□□□ -2.04
KPNB1-208ENST00000580019 REG3AQ06141 175 aa2.31□□□□□ -2.04
KPNB1-208ENST00000580019 EDDM3AQ14507 147 aa2.31□□□□□ -2.04
KPNB1-208ENST00000580019 GUCA2BQ16661 112 aa2.31□□□□□ -2.04
KPNB1-208ENST00000580019 GSG1Q2KHT4 349 aa2.31□□□□□ -2.04
KPNB1-208ENST00000580019 FBXL19-AS1Q494R0 122 aa2.31□□□□□ -2.04
KPNB1-208ENST00000580019 TMEM97Q5BJF2 176 aa2.31□□□□□ -2.04
KPNB1-208ENST00000580019 YIF1BQ5BJH7 314 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms