RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 F2RL2O00254 374 aa8.86□□□□□ -0.99
SS18-213ENST00000579640 PLA2G10O15496 165 aa8.86□□□□□ -0.99
SS18-213ENST00000579640 LYRM1O43325 122 aa8.86□□□□□ -0.99
SS18-213ENST00000579640 ENSAO43768 121 aaKnown RBP8.86□□□□□ -0.99
SS18-213ENST00000579640 PMP2P02689 132 aa8.86□□□□□ -0.99
SS18-213ENST00000579640 LIPFP07098 398 aa8.86□□□□□ -0.99
SS18-213ENST00000579640 ZNF728P0DKX0 622 aa8.86□□□□□ -0.99
SS18-213ENST00000579640 PPIAL4GP0DN37 164 aa8.86□□□□□ -0.99
SS18-213ENST00000579640 SSTR5P35346 364 aa8.86□□□□□ -0.99
SS18-213ENST00000579640 HTD2P86397 168 aa8.86□□□□□ -0.99
SS18-213ENST00000579640 ZNF273Q14593 569 aa8.86□□□□□ -0.99
SS18-213ENST00000579640 C17orf58Q2M2W7 97 aa8.86□□□□□ -0.99
SS18-213ENST00000579640 TMEM17Q86X19 198 aa8.86□□□□□ -0.99
SS18-213ENST00000579640 Q96MF0 132 aa8.86□□□□□ -0.99
SS18-213ENST00000579640 EHFQ9NZC4 300 aa8.86□□□□□ -0.99
SS18-213ENST00000579640 TBC1D24Q9ULP9 559 aa8.86□□□□□ -0.99
SS18-213ENST00000579640 TRBV6-7A0A0A0MS04 114 aa8.85□□□□□ -0.99
SS18-213ENST00000579640 LINC00854A0A1B0GVQ3 168 aa8.85□□□□□ -0.99
SS18-213ENST00000579640 hCG_1809904A0A1W2PP81 198 aa8.85□□□□□ -0.99
SS18-213ENST00000579640 A0A1W2PPE2 198 aa8.85□□□□□ -0.99
SS18-213ENST00000579640 A0A1W2PR64 198 aa8.85□□□□□ -0.99
SS18-213ENST00000579640 A0A1W2PRV1 198 aa8.85□□□□□ -0.99
SS18-213ENST00000579640 C22orf46C9J442 243 aa8.85□□□□□ -0.99
SS18-213ENST00000579640 M0QYG6 137 aa8.85□□□□□ -0.99
SS18-213ENST00000579640 RBP4P02753 201 aa8.85□□□□□ -0.99
SS18-213ENST00000579640 OR5H8P0DN80 308 aa8.85□□□□□ -0.99
SS18-213ENST00000579640 FPR2P25090 351 aa8.85□□□□□ -0.99
SS18-213ENST00000579640 PRR18Q8N4B5 295 aa8.85□□□□□ -0.99
SS18-213ENST00000579640 POC5Q8NA72 575 aa8.85□□□□□ -0.99
SS18-213ENST00000579640 OR52M1Q8NGK5 317 aa8.85□□□□□ -0.99
SS18-213ENST00000579640 OR1L1Q8NH94 360 aa8.85□□□□□ -0.99
SS18-213ENST00000579640 OR10J5Q8NHC4 309 aa8.85□□□□□ -0.99
SS18-213ENST00000579640 C1orf159Q96HA4 380 aa8.85□□□□□ -0.99
SS18-213ENST00000579640 KIRREL1Q96J84 757 aa8.85□□□□□ -0.99
SS18-213ENST00000579640 PRRT1Q99946 306 aa8.85□□□□□ -0.99
SS18-213ENST00000579640 REG4Q9BYZ8 158 aa8.85□□□□□ -0.99
SS18-213ENST00000579640 TINAGL1Q9GZM7 467 aaPredicted RBP8.85□□□□□ -0.99
SS18-213ENST00000579640 MCUBQ9NWR8 336 aa8.85□□□□□ -0.99
SS18-213ENST00000579640 SCP2D1Q9UJQ7 156 aa8.85□□□□□ -0.99
SS18-213ENST00000579640 KIAA2026Q5HYC2 2103 aa8.85□□□□□ -0.99
SS18-213ENST00000579640 ITPR2Q14571 2701 aa8.85□□□□□ -0.99
SS18-213ENST00000579640 IGKV1-6A0A0C4DH72 117 aa8.84□□□□□ -0.99
SS18-213ENST00000579640 C17orf98A8MV24 154 aa8.84□□□□□ -0.99
SS18-213ENST00000579640 FAM157AC9JC47 383 aa8.84□□□□□ -0.99
SS18-213ENST00000579640 AMY2AP04746 511 aa8.84□□□□□ -0.99
SS18-213ENST00000579640 ZBTB25P24278 435 aa8.84□□□□□ -0.99
SS18-213ENST00000579640 ZFP36P26651 326 aaKnown RBP8.84□□□□□ -0.99
SS18-213ENST00000579640 RFX2P48378 723 aa8.84□□□□□ -0.99
SS18-213ENST00000579640 DLX6P56179 175 aa8.84□□□□□ -0.99
SS18-213ENST00000579640 TSPAN5P62079 268 aa8.84□□□□□ -0.99
SS18-213ENST00000579640 HERPUD1Q15011 391 aa8.84□□□□□ -0.99
SS18-213ENST00000579640 IGSF11Q5DX21 431 aa8.84□□□□□ -0.99
SS18-213ENST00000579640 HEPN1Q6WQI6 88 aa8.84□□□□□ -0.99
SS18-213ENST00000579640 ZNF782Q6ZMW2 699 aaPredicted RBP8.84□□□□□ -0.99
SS18-213ENST00000579640 KIR3DL3Q8N743 410 aa8.84□□□□□ -0.99
SS18-213ENST00000579640 IL1F10Q8WWZ1 152 aa8.84□□□□□ -0.99
SS18-213ENST00000579640 GINS4Q9BRT9 223 aa8.84□□□□□ -0.99
SS18-213ENST00000579640 TOLLIPQ9H0E2 274 aa8.84□□□□□ -0.99
SS18-213ENST00000579640 C11orf54Q9H0W9 315 aaPredicted RBP8.84□□□□□ -0.99
SS18-213ENST00000579640 SLC2A8Q9NY64 477 aa8.84□□□□□ -0.99
SS18-213ENST00000579640 IDI2-AS1Q9NZ38 188 aa8.84□□□□□ -0.99
SS18-213ENST00000579640 JPT1Q9UK76 154 aa8.84□□□□□ -0.99
SS18-213ENST00000579640 IGHV2-70DA0A0C4DH43 119 aa8.84□□□□□ -0.99
SS18-213ENST00000579640 B4DSR2 109 aa8.84□□□□□ -0.99
SS18-213ENST00000579640 M0R1W7 72 aa8.84□□□□□ -0.99
SS18-213ENST00000579640 BET1O15155 118 aa8.84□□□□□ -0.99
SS18-213ENST00000579640 HSPA12AO43301 675 aa8.84□□□□□ -0.99
SS18-213ENST00000579640 RGS11O94810 467 aa8.84□□□□□ -0.99
SS18-213ENST00000579640 ZNF735P0CB33 412 aa8.84□□□□□ -0.99
SS18-213ENST00000579640 CCL3L1P16619 93 aa8.84□□□□□ -0.99
SS18-213ENST00000579640 LCN2P80188 198 aa8.84□□□□□ -0.99
SS18-213ENST00000579640 PAX2Q02962 417 aa8.84□□□□□ -0.99
SS18-213ENST00000579640 DHRS11Q6UWP2 260 aa8.84□□□□□ -0.99
SS18-213ENST00000579640 BTNL3Q6UXE8 466 aa8.84□□□□□ -0.99
SS18-213ENST00000579640 C1orf122Q6ZSJ8 110 aa8.84□□□□□ -0.99
SS18-213ENST00000579640 OR4D10Q8NGI6 311 aa8.84□□□□□ -0.99
SS18-213ENST00000579640 OR6F1Q8NGZ6 308 aa8.84□□□□□ -0.99
SS18-213ENST00000579640 OR56B4Q8NH76 319 aa8.84□□□□□ -0.99
SS18-213ENST00000579640 RFESDQ8TAC1 157 aa8.84□□□□□ -0.99
SS18-213ENST00000579640 FAM216AQ8WUB2 273 aa8.84□□□□□ -0.99
SS18-213ENST00000579640 GIMAP1Q8WWP7 306 aa8.84□□□□□ -0.99
SS18-213ENST00000579640 DACT3Q96B18 629 aaPredicted RBP8.84□□□□□ -0.99
SS18-213ENST00000579640 OR2S2Q9NQN1 319 aa8.84□□□□□ -0.99
SS18-213ENST00000579640 SLC23A1Q9UHI7 598 aa8.84□□□□□ -0.99
SS18-213ENST00000579640 NOTCH2Q04721 2471 aa8.83□□□□□ -1
SS18-213ENST00000579640 MEX3AA1L020 520 aaKnown RBP8.83□□□□□ -1
SS18-213ENST00000579640 RNF223E7ERA6 249 aa8.83□□□□□ -1
SS18-213ENST00000579640 SDCBPO00560 298 aaPredicted RBP8.83□□□□□ -1
SS18-213ENST00000579640 PTTG1O95997 202 aa8.83□□□□□ -1
SS18-213ENST00000579640 ECI1P42126 302 aa8.83□□□□□ -1
SS18-213ENST00000579640 RGS21Q2M5E4 152 aa8.83□□□□□ -1
SS18-213ENST00000579640 Q3ZCU0 254 aa8.83□□□□□ -1
SS18-213ENST00000579640 LY6G6FQ5SQ64 297 aa8.83□□□□□ -1
SS18-213ENST00000579640 ZNF660Q6AZW8 331 aaPredicted RBP8.83□□□□□ -1
SS18-213ENST00000579640 FAAP20Q6NZ36 180 aa8.83□□□□□ -1
SS18-213ENST00000579640 H1FOOQ8IZA3 346 aaPredicted RBP8.83□□□□□ -1
SS18-213ENST00000579640 SLC6A7Q99884 636 aa8.83□□□□□ -1
SS18-213ENST00000579640 GFOD1Q9NXC2 390 aa8.83□□□□□ -1
SS18-213ENST00000579640 COPZ2Q9P299 210 aa8.83□□□□□ -1
SS18-213ENST00000579640 GNG12Q9UBI6 72 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms