RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 C15orf65H3BRN8 121 aa9.95□□□□□ -0.82
IFT20-207ENST00000578547 SDCBPO00560 298 aaPredicted RBP9.95□□□□□ -0.82
IFT20-207ENST00000578547 FABP7O15540 132 aa9.95□□□□□ -0.82
IFT20-207ENST00000578547 TPPPO94811 219 aa9.95□□□□□ -0.82
IFT20-207ENST00000578547 SCTP09683 121 aa9.95□□□□□ -0.82
IFT20-207ENST00000578547 GSTT2P0CG29 244 aa9.95□□□□□ -0.82
IFT20-207ENST00000578547 GSTT2BP0CG30 244 aa9.95□□□□□ -0.82
IFT20-207ENST00000578547 CGB3P0DN86 165 aa9.95□□□□□ -0.82
IFT20-207ENST00000578547 CGB7P0DN87 165 aa9.95□□□□□ -0.82
IFT20-207ENST00000578547 IGHV1-8P0DP01 117 aa9.95□□□□□ -0.82
IFT20-207ENST00000578547 IGHV3-43DP0DP04 118 aa9.95□□□□□ -0.82
IFT20-207ENST00000578547 COX7A1P24310 79 aa9.95□□□□□ -0.82
IFT20-207ENST00000578547 ETV6P41212 452 aa9.95□□□□□ -0.82
IFT20-207ENST00000578547 KIR2DS4P43632 304 aa9.95□□□□□ -0.82
IFT20-207ENST00000578547 ARPC4P59998 168 aa9.95□□□□□ -0.82
IFT20-207ENST00000578547 PAX8Q06710 450 aa9.95□□□□□ -0.82
IFT20-207ENST00000578547 KLRD1Q13241 179 aa9.95□□□□□ -0.82
IFT20-207ENST00000578547 KIR2DS1Q14954 304 aa9.95□□□□□ -0.82
IFT20-207ENST00000578547 ZNF79Q15937 498 aa9.95□□□□□ -0.82
IFT20-207ENST00000578547 CR1LQ2VPA4 569 aa9.95□□□□□ -0.82
IFT20-207ENST00000578547 OR52W1Q6IF63 320 aa9.95□□□□□ -0.82
IFT20-207ENST00000578547 Q71RC1 249 aaPredicted RBP9.95□□□□□ -0.82
IFT20-207ENST00000578547 HOGA1Q86XE5 327 aa9.95□□□□□ -0.82
IFT20-207ENST00000578547 PDZD9Q8IXQ8 264 aa9.95□□□□□ -0.82
IFT20-207ENST00000578547 BEST4Q8NFU0 473 aa9.95□□□□□ -0.82
IFT20-207ENST00000578547 LEAP2Q969E1 77 aa9.95□□□□□ -0.82
IFT20-207ENST00000578547 TBX15Q96SF7 602 aa9.95□□□□□ -0.82
IFT20-207ENST00000578547 SOSTQ9BQB4 213 aa9.95□□□□□ -0.82
IFT20-207ENST00000578547 OCSTAMPQ9BR26 566 aa9.95□□□□□ -0.82
IFT20-207ENST00000578547 TMPRSS13Q9BYE2 586 aa9.95□□□□□ -0.82
IFT20-207ENST00000578547 SIRPDQ9H106 197 aa9.95□□□□□ -0.82
IFT20-207ENST00000578547 METTL8Q9H825 291 aaKnown RBP9.95□□□□□ -0.82
IFT20-207ENST00000578547 RAB9BQ9NP90 201 aa9.95□□□□□ -0.82
IFT20-207ENST00000578547 AKIP1Q9NQ31 210 aa9.95□□□□□ -0.82
IFT20-207ENST00000578547 SESN1Q9Y6P5 492 aa9.95□□□□□ -0.82
IFT20-207ENST00000578547 TEP1Q99973 2627 aaKnown RBP9.94□□□□□ -0.82
IFT20-207ENST00000578547 WNK2Q9Y3S1 2297 aa9.94□□□□□ -0.82
IFT20-207ENST00000578547 IGHV3OR16-10A0A075B7F0 116 aa9.94□□□□□ -0.82
IFT20-207ENST00000578547 POM121CA8CG34 1229 aa9.94□□□□□ -0.82
IFT20-207ENST00000578547 GABARAPH6UMI1 98 aa9.94□□□□□ -0.82
IFT20-207ENST00000578547 J3QLI3 93 aa9.94□□□□□ -0.82
IFT20-207ENST00000578547 SULT1C2O00338 296 aa9.94□□□□□ -0.82
IFT20-207ENST00000578547 BET1O15155 118 aa9.94□□□□□ -0.82
IFT20-207ENST00000578547 CTDSPLO15194 276 aa9.94□□□□□ -0.82
IFT20-207ENST00000578547 IGHV3-7P01780 117 aa9.94□□□□□ -0.82
IFT20-207ENST00000578547 RBP4P02753 201 aa9.94□□□□□ -0.82
IFT20-207ENST00000578547 MMP9P14780 707 aa9.94□□□□□ -0.82
IFT20-207ENST00000578547 FPR2P25090 351 aa9.94□□□□□ -0.82
IFT20-207ENST00000578547 PTBP1P26599 531 aaKnown RBP eCLIP9.94□□□□□ -0.82
IFT20-207ENST00000578547 RCVRNP35243 200 aa9.94□□□□□ -0.82
IFT20-207ENST00000578547 MRPS10P82664 201 aaKnown RBP9.94□□□□□ -0.82
IFT20-207ENST00000578547 GNMTQ14749 295 aa9.94□□□□□ -0.82
IFT20-207ENST00000578547 IGSF11Q5DX21 431 aa9.94□□□□□ -0.82
IFT20-207ENST00000578547 FAM53AQ6NSI3 398 aaPredicted RBP9.94□□□□□ -0.82
IFT20-207ENST00000578547 HEPN1Q6WQI6 88 aa9.94□□□□□ -0.82
IFT20-207ENST00000578547 ZNF554Q86TJ5 538 aa9.94□□□□□ -0.82
IFT20-207ENST00000578547 Q8N402 240 aa9.94□□□□□ -0.82
IFT20-207ENST00000578547 MFSD4AQ8N468 514 aa9.94□□□□□ -0.82
IFT20-207ENST00000578547 C11orf42Q8N5U0 333 aa9.94□□□□□ -0.82
IFT20-207ENST00000578547 OR10V1Q8NGI7 309 aa9.94□□□□□ -0.82
IFT20-207ENST00000578547 SMIM4Q8WVI0 70 aa9.94□□□□□ -0.82
IFT20-207ENST00000578547 SNAPC3Q92966 411 aa9.94□□□□□ -0.82
IFT20-207ENST00000578547 LHX4Q969G2 390 aa9.94□□□□□ -0.82
IFT20-207ENST00000578547 GALMQ96C23 342 aa9.94□□□□□ -0.82
IFT20-207ENST00000578547 DMRTB1Q96MA1 342 aa9.94□□□□□ -0.82
IFT20-207ENST00000578547 GNG12Q9UBI6 72 aa9.94□□□□□ -0.82
IFT20-207ENST00000578547 KLK11Q9UBX7 282 aa9.94□□□□□ -0.82
IFT20-207ENST00000578547 SLC23A1Q9UHI7 598 aa9.94□□□□□ -0.82
IFT20-207ENST00000578547 MTORP42345 2549 aa9.94□□□□□ -0.82
IFT20-207ENST00000578547 KIAA2026Q5HYC2 2103 aa9.94□□□□□ -0.82
IFT20-207ENST00000578547 TRAV40A0A0B4J280 105 aa9.93□□□□□ -0.82
IFT20-207ENST00000578547 A0A1W2PRD5 423 aa9.93□□□□□ -0.82
IFT20-207ENST00000578547 A0A1W2PRF3 423 aa9.93□□□□□ -0.82
IFT20-207ENST00000578547 A0A1W2PRM7 423 aa9.93□□□□□ -0.82
IFT20-207ENST00000578547 A8MV72 311 aaPredicted RBP9.93□□□□□ -0.82
IFT20-207ENST00000578547 NPIPB11E5RHQ5 1161 aa9.93□□□□□ -0.82
IFT20-207ENST00000578547 F2RL2O00254 374 aa9.93□□□□□ -0.82
IFT20-207ENST00000578547 HSPA12AO43301 675 aa9.93□□□□□ -0.82
IFT20-207ENST00000578547 GSTZ1O43708 216 aaPredicted RBP9.93□□□□□ -0.82
IFT20-207ENST00000578547 RBBP9O75884 186 aa9.93□□□□□ -0.82
IFT20-207ENST00000578547 AVPP01185 164 aa9.93□□□□□ -0.82
IFT20-207ENST00000578547 HOXB4P17483 251 aaPredicted RBP9.93□□□□□ -0.82
IFT20-207ENST00000578547 HLA-DMAP28067 261 aa9.93□□□□□ -0.82
IFT20-207ENST00000578547 PPP1CCP36873 323 aaKnown RBP9.93□□□□□ -0.82
IFT20-207ENST00000578547 GNG10P50151 68 aa9.93□□□□□ -0.82
IFT20-207ENST00000578547 ACTBP60709 375 aa9.93□□□□□ -0.82
IFT20-207ENST00000578547 ACTG1P63261 375 aa9.93□□□□□ -0.82
IFT20-207ENST00000578547 ZNF45Q02386 682 aa9.93□□□□□ -0.82
IFT20-207ENST00000578547 HERPUD1Q15011 391 aa9.93□□□□□ -0.82
IFT20-207ENST00000578547 SRSF7Q16629 238 aaKnown RBP eCLIP9.93□□□□□ -0.82
IFT20-207ENST00000578547 CHRFAM7AQ494W8 412 aa9.93□□□□□ -0.82
IFT20-207ENST00000578547 UTF1Q5T230 341 aa9.93□□□□□ -0.82
IFT20-207ENST00000578547 LINC00299Q6ZSB3 139 aa9.93□□□□□ -0.82
IFT20-207ENST00000578547 C1orf122Q6ZSJ8 110 aa9.93□□□□□ -0.82
IFT20-207ENST00000578547 IL17RELQ6ZVW7 336 aa9.93□□□□□ -0.82
IFT20-207ENST00000578547 OR52L2PQ8NGH6 319 aa9.93□□□□□ -0.82
IFT20-207ENST00000578547 OR4A4PQ8NGN8 299 aa9.93□□□□□ -0.82
IFT20-207ENST00000578547 S100ZQ8WXG8 99 aa9.93□□□□□ -0.82
IFT20-207ENST00000578547 SRRQ9GZT4 340 aa9.93□□□□□ -0.82
IFT20-207ENST00000578547 TMEM133Q9H2Q1 129 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms