RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 ABCD4O14678 606 aa9.36□□□□□ -0.91
SKA2-204ENST00000578519 WNT9BO14905 357 aa9.36□□□□□ -0.91
SKA2-204ENST00000578519 PGLYRP1O75594 196 aaPredicted RBP9.36□□□□□ -0.91
SKA2-204ENST00000578519 CD3EP07766 207 aa9.36□□□□□ -0.91
SKA2-204ENST00000578519 CD55P08174 381 aa9.36□□□□□ -0.91
SKA2-204ENST00000578519 PSG2P11465 335 aa9.36□□□□□ -0.91
SKA2-204ENST00000578519 SLC25A6P12236 298 aa9.36□□□□□ -0.91
SKA2-204ENST00000578519 MMP9P14780 707 aa9.36□□□□□ -0.91
SKA2-204ENST00000578519 MUC1P15941 1255 aaPredicted RBP9.36□□□□□ -0.91
SKA2-204ENST00000578519 VDAC1P21796 283 aa9.36□□□□□ -0.91
SKA2-204ENST00000578519 F2RP25116 425 aa9.36□□□□□ -0.91
SKA2-204ENST00000578519 HTD2P86397 168 aa9.36□□□□□ -0.91
SKA2-204ENST00000578519 CATR1Q13166 79 aa9.36□□□□□ -0.91
SKA2-204ENST00000578519 IL15RAQ13261 267 aa9.36□□□□□ -0.91
SKA2-204ENST00000578519 RAB32Q13637 225 aa9.36□□□□□ -0.91
SKA2-204ENST00000578519 HERPUD1Q15011 391 aa9.36□□□□□ -0.91
SKA2-204ENST00000578519 SP6Q3SY56 376 aa9.36□□□□□ -0.91
SKA2-204ENST00000578519 TMEM268Q5VZI3 342 aa9.36□□□□□ -0.91
SKA2-204ENST00000578519 MEX3BQ6ZN04 569 aaKnown RBP9.36□□□□□ -0.91
SKA2-204ENST00000578519 ZNF818PQ6ZRF7 136 aa9.36□□□□□ -0.91
SKA2-204ENST00000578519 MOGAT3Q86VF5 341 aa9.36□□□□□ -0.91
SKA2-204ENST00000578519 LRP11Q86VZ4 500 aa9.36□□□□□ -0.91
SKA2-204ENST00000578519 PDZD9Q8IXQ8 264 aa9.36□□□□□ -0.91
SKA2-204ENST00000578519 FAM71E2Q8N5Q1 922 aa9.36□□□□□ -0.91
SKA2-204ENST00000578519 RNASE11Q8TAA1 199 aaKnown RBP9.36□□□□□ -0.91
SKA2-204ENST00000578519 ST8SIA2Q92186 375 aa9.36□□□□□ -0.91
SKA2-204ENST00000578519 RBPMSQ93062 196 aaKnown RBP9.36□□□□□ -0.91
SKA2-204ENST00000578519 RNASE6Q93091 150 aaKnown RBP9.36□□□□□ -0.91
SKA2-204ENST00000578519 RNF126Q9BV68 326 aa9.36□□□□□ -0.91
SKA2-204ENST00000578519 FAM234AQ9H0X4 552 aa9.36□□□□□ -0.91
SKA2-204ENST00000578519 MS4A5Q9H3V2 200 aa9.36□□□□□ -0.91
SKA2-204ENST00000578519 FAM212BQ9NTI7 297 aaPredicted RBP9.36□□□□□ -0.91
SKA2-204ENST00000578519 BORCS7-ASMTA0A0B4J1R7 106 aa9.35□□□□□ -0.91
SKA2-204ENST00000578519 IGKV1-6A0A0C4DH72 117 aa9.35□□□□□ -0.91
SKA2-204ENST00000578519 IGHV3-64DA0A0J9YX35 117 aa9.35□□□□□ -0.91
SKA2-204ENST00000578519 DPRXA6NFQ7 191 aa9.35□□□□□ -0.91
SKA2-204ENST00000578519 NKX6-3A6NJ46 265 aa9.35□□□□□ -0.91
SKA2-204ENST00000578519 CCL21O00585 134 aa9.35□□□□□ -0.91
SKA2-204ENST00000578519 DEDDO75618 318 aa9.35□□□□□ -0.91
SKA2-204ENST00000578519 LHBP01229 141 aa9.35□□□□□ -0.91
SKA2-204ENST00000578519 IGHV1-46P01743 117 aa9.35□□□□□ -0.91
SKA2-204ENST00000578519 OR3A1P47881 315 aa9.35□□□□□ -0.91
SKA2-204ENST00000578519 VAMP2P63027 116 aa9.35□□□□□ -0.91
SKA2-204ENST00000578519 C20orf204Q6ZNR8 217 aa9.35□□□□□ -0.91
SKA2-204ENST00000578519 Q6ZPA2 131 aa9.35□□□□□ -0.91
SKA2-204ENST00000578519 SELENOHQ8IZQ5 122 aaKnown RBP9.35□□□□□ -0.91
SKA2-204ENST00000578519 PRR18Q8N4B5 295 aa9.35□□□□□ -0.91
SKA2-204ENST00000578519 BOLLQ8N9W6 283 aaKnown RBP9.35□□□□□ -0.91
SKA2-204ENST00000578519 ZCCHC14Q8WYQ9 949 aaKnown RBP9.35□□□□□ -0.91
SKA2-204ENST00000578519 ARL11Q969Q4 196 aa9.35□□□□□ -0.91
SKA2-204ENST00000578519 SLC25A31Q9H0C2 315 aa9.35□□□□□ -0.91
SKA2-204ENST00000578519 SHARPINQ9H0F6 387 aa9.35□□□□□ -0.91
SKA2-204ENST00000578519 ZNF665Q9H7R5 613 aa9.35□□□□□ -0.91
SKA2-204ENST00000578519 MED9Q9NWA0 146 aa9.35□□□□□ -0.91
SKA2-204ENST00000578519 KCNS2Q9ULS6 477 aa9.35□□□□□ -0.91
SKA2-204ENST00000578519 PPP1R3CQ9UQK1 317 aa9.35□□□□□ -0.91
SKA2-204ENST00000578519 LAMP3Q9UQV4 416 aa9.35□□□□□ -0.91
SKA2-204ENST00000578519 LSM5Q9Y4Y9 91 aaKnown RBP9.35□□□□□ -0.91
SKA2-204ENST00000578519 GTF3C1Q12789 2109 aa9.35□□□□□ -0.91
SKA2-204ENST00000578519 CACNA1GO43497 2377 aa9.35□□□□□ -0.91
SKA2-204ENST00000578519 TRAV38-1A0A0B4J264 116 aa9.34□□□□□ -0.91
SKA2-204ENST00000578519 A0A1B0GU03 582 aa9.34□□□□□ -0.91
SKA2-204ENST00000578519 RNF222A6NCQ9 220 aa9.34□□□□□ -0.91
SKA2-204ENST00000578519 C17orf100A8MU93 164 aa9.34□□□□□ -0.91
SKA2-204ENST00000578519 WRBO00258 174 aa9.34□□□□□ -0.91
SKA2-204ENST00000578519 GPR137BO60478 399 aa9.34□□□□□ -0.91
SKA2-204ENST00000578519 PSPNO60542 156 aa9.34□□□□□ -0.91
SKA2-204ENST00000578519 JTBO76095 146 aa9.34□□□□□ -0.91
SKA2-204ENST00000578519 SCGB1D2O95969 90 aa9.34□□□□□ -0.91
SKA2-204ENST00000578519 HBZP02008 142 aa9.34□□□□□ -0.91
SKA2-204ENST00000578519 OR4A8P0C604 315 aa9.34□□□□□ -0.91
SKA2-204ENST00000578519 RPL12P30050 165 aaKnown RBP9.34□□□□□ -0.91
SKA2-204ENST00000578519 APOBEC3AP31941 199 aaPredicted RBP9.34□□□□□ -0.91
SKA2-204ENST00000578519 NKX2-1P43699 371 aaPredicted RBP9.34□□□□□ -0.91
SKA2-204ENST00000578519 P2RY1P47900 373 aa9.34□□□□□ -0.91
SKA2-204ENST00000578519 BSPH1Q075Z2 132 aa9.34□□□□□ -0.91
SKA2-204ENST00000578519 AESQ08117 197 aa9.34□□□□□ -0.91
SKA2-204ENST00000578519 PRR30Q53SZ7 412 aaPredicted RBP9.34□□□□□ -0.91
SKA2-204ENST00000578519 NCMAPQ5T1S8 102 aa9.34□□□□□ -0.91
SKA2-204ENST00000578519 UNQ6494/PRO21346Q6UXR6 183 aa9.34□□□□□ -0.91
SKA2-204ENST00000578519 LYZL2Q7Z4W2 148 aa9.34□□□□□ -0.91
SKA2-204ENST00000578519 GCSAMQ8N6F7 178 aa9.34□□□□□ -0.91
SKA2-204ENST00000578519 ZNF645Q8N7E2 425 aa9.34□□□□□ -0.91
SKA2-204ENST00000578519 OR1S1Q8NH92 325 aa9.34□□□□□ -0.91
SKA2-204ENST00000578519 STOML3Q8TAV4 291 aa9.34□□□□□ -0.91
SKA2-204ENST00000578519 FAM222BQ8WU58 562 aa9.34□□□□□ -0.91
SKA2-204ENST00000578519 LSM10Q969L4 123 aaKnown RBP9.34□□□□□ -0.91
SKA2-204ENST00000578519 RRNAD1Q96FB5 475 aaKnown RBP9.34□□□□□ -0.91
SKA2-204ENST00000578519 CYYR1Q96J86 154 aa9.34□□□□□ -0.91
SKA2-204ENST00000578519 WFIKKN1Q96NZ8 548 aa9.34□□□□□ -0.91
SKA2-204ENST00000578519 TP53RKQ96S44 253 aa9.34□□□□□ -0.91
SKA2-204ENST00000578519 KCNJ16Q9NPI9 418 aa9.34□□□□□ -0.91
SKA2-204ENST00000578519 POMT1Q9Y6A1 747 aa9.34□□□□□ -0.91
SKA2-204ENST00000578519 RIF1Q5UIP0 2472 aaKnown RBP9.34□□□□□ -0.91
SKA2-204ENST00000578519 MUC6Q6W4X9 2439 aa9.34□□□□□ -0.91
SKA2-204ENST00000578519 ZFHX2Q9C0A1 2572 aaPredicted RBP9.33□□□□□ -0.92
SKA2-204ENST00000578519 IGKV1D-13A0A0B4J2D9 117 aa9.33□□□□□ -0.92
SKA2-204ENST00000578519 ODAMA1E959 279 aa9.33□□□□□ -0.92
SKA2-204ENST00000578519 CLEC18AA5D8T8 446 aa9.33□□□□□ -0.92
SKA2-204ENST00000578519 B9A039 149 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms