RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, human

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-216	ENST00000577001	ERVFRD-1	P60508	538 aa		12.63	□□□□□ -0.39
PRPF8-216	ENST00000577001	CNEP1R1	Q8N9A8	125 aa		12.63	□□□□□ -0.39
PRPF8-216	ENST00000577001	CCDC71L	Q8N9Z2	235 aa		12.63	□□□□□ -0.39
PRPF8-216	ENST00000577001	TMEM222	Q9H0R3	208 aa		12.63	□□□□□ -0.39
PRPF8-216	ENST00000577001	MT-CO3	P00414	261 aa		12.63	□□□□□ -0.39
PRPF8-216	ENST00000577001	LYL1	P12980	280 aa		12.63	□□□□□ -0.39
PRPF8-216	ENST00000577001	RTP5	Q14D33	572 aa		12.63	□□□□□ -0.39
PRPF8-216	ENST00000577001	OR1C1	Q15619	314 aa		12.63	□□□□□ -0.39
PRPF8-216	ENST00000577001	FAM189A2	Q15884	450 aa		12.63	□□□□□ -0.39
PRPF8-216	ENST00000577001	FAM209B	Q5JX69	171 aa		12.63	□□□□□ -0.39
PRPF8-216	ENST00000577001	GSN-AS1	Q9NRJ2	163 aa		12.63	□□□□□ -0.39
PRPF8-216	ENST00000577001	ABCA4	P78363	2273 aa		12.63	□□□□□ -0.39
PRPF8-216	ENST00000577001	UBE2L5P	A0A1B0GUS4	154 aa		12.63	□□□□□ -0.39
PRPF8-216	ENST00000577001	EDDM3A	Q14507	147 aa		12.63	□□□□□ -0.39
PRPF8-216	ENST00000577001	ODF3L1	Q8IXM7	274 aa		12.63	□□□□□ -0.39
PRPF8-216	ENST00000577001	LILRB2	Q8N423	598 aa		12.63	□□□□□ -0.39
PRPF8-216	ENST00000577001	OR10D4P	Q8NGN7	298 aa		12.63	□□□□□ -0.39
PRPF8-216	ENST00000577001	GPR61	Q9BZJ8	451 aa		12.63	□□□□□ -0.39
PRPF8-216	ENST00000577001	OR2J1	Q9GZK6	312 aa		12.63	□□□□□ -0.39
PRPF8-216	ENST00000577001	IFT22	Q9H7X7	185 aa		12.63	□□□□□ -0.39
PRPF8-216	ENST00000577001	CEP295	Q9C0D2	2601 aa		12.62	□□□□□ -0.39
PRPF8-216	ENST00000577001	LOC102725191	A0A1B0GVB3	256 aa		12.62	□□□□□ -0.39
PRPF8-216	ENST00000577001	PGLYRP1	O75594	196 aa	Predicted RBP	12.62	□□□□□ -0.39
PRPF8-216	ENST00000577001	SNRPC	P09234	159 aa	Known RBP	12.62	□□□□□ -0.39
PRPF8-216	ENST00000577001	CTSS	P25774	331 aa		12.62	□□□□□ -0.39
PRPF8-216	ENST00000577001	OR10J5	Q8NHC4	309 aa		12.62	□□□□□ -0.39
PRPF8-216	ENST00000577001		Q8WTZ3	238 aa		12.62	□□□□□ -0.39
PRPF8-216	ENST00000577001	SLC25A22	Q9H936	323 aa		12.62	□□□□□ -0.39
PRPF8-216	ENST00000577001	ATPIF1	Q9UII2	106 aa		12.62	□□□□□ -0.39
PRPF8-216	ENST00000577001	TINAG	Q9UJW2	476 aa		12.62	□□□□□ -0.39
PRPF8-216	ENST00000577001	POMT1	Q9Y6A1	747 aa		12.62	□□□□□ -0.39
PRPF8-216	ENST00000577001	CLDN1	O95832	211 aa		12.62	□□□□□ -0.39
PRPF8-216	ENST00000577001	FABP6	P51161	128 aa		12.62	□□□□□ -0.39
PRPF8-216	ENST00000577001	IL11RA	Q14626	422 aa		12.62	□□□□□ -0.39
PRPF8-216	ENST00000577001	C10orf91	Q5T1B1	145 aa		12.62	□□□□□ -0.39
PRPF8-216	ENST00000577001	MSL2	Q9HCI7	577 aa		12.62	□□□□□ -0.39
PRPF8-216	ENST00000577001	TNC	P24821	2201 aa		12.62	□□□□□ -0.39
PRPF8-216	ENST00000577001	DEGS1	O15121	323 aa		12.61	□□□□□ -0.39
PRPF8-216	ENST00000577001	MMP7	P09237	267 aa	Predicted RBP	12.61	□□□□□ -0.39
PRPF8-216	ENST00000577001	SURF2	Q15527	256 aa	Predicted RBP	12.61	□□□□□ -0.39
PRPF8-216	ENST00000577001	OR4D5	Q8NGN0	318 aa		12.61	□□□□□ -0.39
PRPF8-216	ENST00000577001	RNF138	Q8WVD3	245 aa		12.61	□□□□□ -0.39
PRPF8-216	ENST00000577001	RPRM	Q9NS64	109 aa		12.61	□□□□□ -0.39
PRPF8-216	ENST00000577001	CLN8	Q9UBY8	286 aa		12.61	□□□□□ -0.39
PRPF8-216	ENST00000577001	COLQ	Q9Y215	455 aa	Predicted RBP	12.61	□□□□□ -0.39
PRPF8-216	ENST00000577001	RPL36A-HNRNPH2	H7BZ11	118 aa		12.61	□□□□□ -0.39
PRPF8-216	ENST00000577001	G6PC	P35575	357 aa		12.61	□□□□□ -0.39
PRPF8-216	ENST00000577001	SPSB3	Q6PJ21	355 aa		12.61	□□□□□ -0.39
PRPF8-216	ENST00000577001	PLPPR1	Q8TBJ4	325 aa		12.61	□□□□□ -0.39
PRPF8-216	ENST00000577001	APH1A	Q96BI3	265 aa		12.61	□□□□□ -0.39
PRPF8-216	ENST00000577001	SCRT1	Q9BWW7	348 aa		12.61	□□□□□ -0.39
PRPF8-216	ENST00000577001		Q9N2K0	584 aa		12.61	□□□□□ -0.39
PRPF8-216	ENST00000577001	INTS1	Q8N201	2190 aa	Known RBP	12.61	□□□□□ -0.39
PRPF8-216	ENST00000577001	GJE1	A6NN92	205 aa		12.61	□□□□□ -0.39
PRPF8-216	ENST00000577001	TOX3	O15405	576 aa	Predicted RBP	12.61	□□□□□ -0.39
PRPF8-216	ENST00000577001	RAMP3	O60896	148 aa		12.61	□□□□□ -0.39
PRPF8-216	ENST00000577001	SYNGR4	O95473	234 aa		12.61	□□□□□ -0.39
PRPF8-216	ENST00000577001	UBE2G2	P60604	165 aa		12.61	□□□□□ -0.39
PRPF8-216	ENST00000577001	C6orf15	Q6UXA7	325 aa	Predicted RBP	12.61	□□□□□ -0.39
PRPF8-216	ENST00000577001	PBDC1	Q9BVG4	233 aa		12.61	□□□□□ -0.39
PRPF8-216	ENST00000577001	TAAR3P	Q9P1P4	343 aa		12.61	□□□□□ -0.39
PRPF8-216	ENST00000577001		A0A087WZY1	265 aa		12.6	□□□□□ -0.39
PRPF8-216	ENST00000577001	SCAF4	O95104	1147 aa	Known RBP	12.6	□□□□□ -0.39
PRPF8-216	ENST00000577001	MT-ND4L	P03901	98 aa		12.6	□□□□□ -0.39
PRPF8-216	ENST00000577001	CEACAM6	P40199	344 aa		12.6	□□□□□ -0.39
PRPF8-216	ENST00000577001	WNT5A	P41221	380 aa		12.6	□□□□□ -0.39
PRPF8-216	ENST00000577001	HIST1H3A	P68431	136 aa		12.6	□□□□□ -0.39
PRPF8-216	ENST00000577001	PLP2	Q04941	152 aa		12.6	□□□□□ -0.39
PRPF8-216	ENST00000577001	AES	Q08117	197 aa		12.6	□□□□□ -0.39
PRPF8-216	ENST00000577001	ADIRF	Q15847	76 aa		12.6	□□□□□ -0.39
PRPF8-216	ENST00000577001	HIST2H3PS2	Q5TEC6	136 aa		12.6	□□□□□ -0.39
PRPF8-216	ENST00000577001	VHLL	Q6RSH7	139 aa		12.6	□□□□□ -0.39
PRPF8-216	ENST00000577001	MDP1	Q86V88	176 aa		12.6	□□□□□ -0.39
PRPF8-216	ENST00000577001	CARF	Q8N187	725 aa		12.6	□□□□□ -0.39
PRPF8-216	ENST00000577001	TMEM251	Q8N6I4	163 aa		12.6	□□□□□ -0.39
PRPF8-216	ENST00000577001	TRAV24	A0A0B4J272	114 aa		12.6	□□□□□ -0.39
PRPF8-216	ENST00000577001		K7N7A8	449 aa		12.6	□□□□□ -0.39
PRPF8-216	ENST00000577001	SEC11B	P0C7V7	166 aa		12.6	□□□□□ -0.39
PRPF8-216	ENST00000577001	PRSS8	Q16651	343 aa		12.6	□□□□□ -0.39
PRPF8-216	ENST00000577001	VKORC1L1	Q8N0U8	176 aa		12.6	□□□□□ -0.39
PRPF8-216	ENST00000577001	OR2M7	Q8NG81	312 aa		12.6	□□□□□ -0.39
PRPF8-216	ENST00000577001	OR52L2P	Q8NGH6	319 aa		12.6	□□□□□ -0.39
PRPF8-216	ENST00000577001	ZDHHC16	Q969W1	377 aa		12.6	□□□□□ -0.39
PRPF8-216	ENST00000577001	ABHD14B	Q96IU4	210 aa		12.6	□□□□□ -0.39
PRPF8-216	ENST00000577001	GINS3	Q9BRX5	216 aa		12.6	□□□□□ -0.39
PRPF8-216	ENST00000577001	PLEKHF2	Q9H8W4	249 aa		12.6	□□□□□ -0.39
PRPF8-216	ENST00000577001	COL12A1	Q99715	3063 aa		12.6	□□□□□ -0.39
PRPF8-216	ENST00000577001	LOC102723996	A0A087X1L8	192 aa		12.59	□□□□□ -0.39
PRPF8-216	ENST00000577001	NXPH2	O95156	264 aa		12.59	□□□□□ -0.39
PRPF8-216	ENST00000577001	PRB4	P10163	310 aa	Predicted RBP	12.59	□□□□□ -0.39
PRPF8-216	ENST00000577001	DTYMK	P23919	212 aa		12.59	□□□□□ -0.39
PRPF8-216	ENST00000577001	S100P	P25815	95 aa		12.59	□□□□□ -0.39
PRPF8-216	ENST00000577001	ALDH3B1	P43353	468 aa		12.59	□□□□□ -0.39
PRPF8-216	ENST00000577001	PRR31	Q5SQ13	230 aa		12.59	□□□□□ -0.39
PRPF8-216	ENST00000577001	ZNF561	Q8N587	486 aa		12.59	□□□□□ -0.39
PRPF8-216	ENST00000577001	M1AP	Q8TC57	530 aa		12.59	□□□□□ -0.39
PRPF8-216	ENST00000577001	LEAP2	Q969E1	77 aa		12.59	□□□□□ -0.39
PRPF8-216	ENST00000577001	WDYHV1	Q96HA8	205 aa		12.59	□□□□□ -0.39
PRPF8-216	ENST00000577001	SNX22	Q96L94	193 aa		12.59	□□□□□ -0.39
PRPF8-216	ENST00000577001	KIAA1549	Q9HCM3	1950 aa		12.59	□□□□□ -0.39

Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms