RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 DMRT1Q9Y5R6 373 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 DNAH9Q9NYC9 4486 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 DSCAML1Q8TD84 2053 aa4.93□□□□□ -1.62
NUP88-212ENST00000576708 WI2-2373I1.2A0A1W2PRP0 233 aa4.93□□□□□ -1.62
NUP88-212ENST00000576708 LINC00473A8K010 186 aa4.93□□□□□ -1.62
NUP88-212ENST00000576708 LEUTXA8MZ59 168 aa4.93□□□□□ -1.62
NUP88-212ENST00000576708 BUB1B-PAK6H3BSN5 160 aa4.93□□□□□ -1.62
NUP88-212ENST00000576708 SLC33A1O00400 549 aaPredicted RBP4.93□□□□□ -1.62
NUP88-212ENST00000576708 TOR1AO14656 332 aa4.93□□□□□ -1.62
NUP88-212ENST00000576708 EI24O14681 340 aa4.93□□□□□ -1.62
NUP88-212ENST00000576708 DEGS1O15121 323 aa4.93□□□□□ -1.62
NUP88-212ENST00000576708 KDM4BO94953 1096 aa4.93□□□□□ -1.62
NUP88-212ENST00000576708 OR2F2O95006 317 aa4.93□□□□□ -1.62
NUP88-212ENST00000576708 ISG15P05161 165 aa4.93□□□□□ -1.62
NUP88-212ENST00000576708 HCKP08631 526 aa4.93□□□□□ -1.62
NUP88-212ENST00000576708 OCM2P0CE71 109 aa4.93□□□□□ -1.62
NUP88-212ENST00000576708 OCMP0CE72 109 aaPredicted RBP4.93□□□□□ -1.62
NUP88-212ENST00000576708 TMEM225BP0DP42 221 aa4.93□□□□□ -1.62
NUP88-212ENST00000576708 LMO1P25800 156 aa4.93□□□□□ -1.62
NUP88-212ENST00000576708 HOXD3P31249 432 aaPredicted RBP4.93□□□□□ -1.62
NUP88-212ENST00000576708 BRS3P32247 399 aa4.93□□□□□ -1.62
NUP88-212ENST00000576708 ZP1P60852 638 aa4.93□□□□□ -1.62
NUP88-212ENST00000576708 CDC42P60953 191 aa4.93□□□□□ -1.62
NUP88-212ENST00000576708 BDH1Q02338 343 aa4.93□□□□□ -1.62
NUP88-212ENST00000576708 PMS2P11Q13670 270 aa4.93□□□□□ -1.62
NUP88-212ENST00000576708 ALKBH1Q13686 389 aaKnown RBP4.93□□□□□ -1.62
NUP88-212ENST00000576708 CDK5R1Q15078 307 aa4.93□□□□□ -1.62
NUP88-212ENST00000576708 HLA-DRB5Q30154 266 aa4.93□□□□□ -1.62
NUP88-212ENST00000576708 C2orf76Q3KRA6 126 aa4.93□□□□□ -1.62
NUP88-212ENST00000576708 TPTE2P1Q5T6R2 138 aa4.93□□□□□ -1.62
NUP88-212ENST00000576708 OR52W1Q6IF63 320 aa4.93□□□□□ -1.62
NUP88-212ENST00000576708 FAM53AQ6NSI3 398 aaPredicted RBP4.93□□□□□ -1.62
NUP88-212ENST00000576708 C11orf87Q6NUJ2 197 aa4.93□□□□□ -1.62
NUP88-212ENST00000576708 HEPN1Q6WQI6 88 aa4.93□□□□□ -1.62
NUP88-212ENST00000576708 ZBTB49Q6ZSB9 765 aa4.93□□□□□ -1.62
NUP88-212ENST00000576708 C18orf65Q6ZTR6 163 aa4.93□□□□□ -1.62
NUP88-212ENST00000576708 ZNF329Q86UD4 541 aa4.93□□□□□ -1.62
NUP88-212ENST00000576708 OR10K1Q8NGX5 313 aa4.93□□□□□ -1.62
NUP88-212ENST00000576708 RFESDQ8TAC1 157 aa4.93□□□□□ -1.62
NUP88-212ENST00000576708 CAPSLQ8WWF8 208 aa4.93□□□□□ -1.62
NUP88-212ENST00000576708 CORO2AQ92828 525 aa4.93□□□□□ -1.62
NUP88-212ENST00000576708 SPSB1Q96BD6 273 aa4.93□□□□□ -1.62
NUP88-212ENST00000576708 C10orf35Q96D05 121 aa4.93□□□□□ -1.62
NUP88-212ENST00000576708 LGALS12Q96DT0 336 aa4.93□□□□□ -1.62
NUP88-212ENST00000576708 SPXQ9BT56 116 aa4.93□□□□□ -1.62
NUP88-212ENST00000576708 COMMD4Q9H0A8 199 aa4.93□□□□□ -1.62
NUP88-212ENST00000576708 GAL3ST2Q9H3Q3 398 aa4.93□□□□□ -1.62
NUP88-212ENST00000576708 AMBNQ9NP70 447 aa4.93□□□□□ -1.62
NUP88-212ENST00000576708 IMPAD1Q9NX62 359 aa4.93□□□□□ -1.62
NUP88-212ENST00000576708 ENOPH1Q9UHY7 261 aa4.93□□□□□ -1.62
NUP88-212ENST00000576708 GLS2Q9UI32 602 aa4.93□□□□□ -1.62
NUP88-212ENST00000576708 KIF25Q9UIL4 384 aa4.93□□□□□ -1.62
NUP88-212ENST00000576708 LINC00527Q9UJ94 153 aa4.93□□□□□ -1.62
NUP88-212ENST00000576708 HHLA2Q9UM44 414 aa4.93□□□□□ -1.62
NUP88-212ENST00000576708 EXOGQ9Y2C4 368 aaKnown RBP4.93□□□□□ -1.62
NUP88-212ENST00000576708 TRAV24A0A0B4J272 114 aa4.92□□□□□ -1.62
NUP88-212ENST00000576708 A0A1W2PPE3 182 aa4.92□□□□□ -1.62
NUP88-212ENST00000576708 LINC01548A6NM66 108 aa4.92□□□□□ -1.62
NUP88-212ENST00000576708 E9PQ18 207 aa4.92□□□□□ -1.62
NUP88-212ENST00000576708 H0YJX3 145 aa4.92□□□□□ -1.62
NUP88-212ENST00000576708 H3BNX3 289 aa4.92□□□□□ -1.62
NUP88-212ENST00000576708 MT-ND2P03891 347 aa4.92□□□□□ -1.62
NUP88-212ENST00000576708 ALDOBP05062 364 aa4.92□□□□□ -1.62
NUP88-212ENST00000576708 ALPLP05186 524 aa4.92□□□□□ -1.62
NUP88-212ENST00000576708 S100A9P06702 114 aaKnown RBP4.92□□□□□ -1.62
NUP88-212ENST00000576708 IL6RP08887 468 aaPredicted RBP4.92□□□□□ -1.62
NUP88-212ENST00000576708 CGB3P0DN86 165 aa4.92□□□□□ -1.62
NUP88-212ENST00000576708 CGB7P0DN87 165 aa4.92□□□□□ -1.62
NUP88-212ENST00000576708 FCGR1AP12314 374 aa4.92□□□□□ -1.62
NUP88-212ENST00000576708 CD34P28906 385 aa4.92□□□□□ -1.62
NUP88-212ENST00000576708 PTGFRP43088 359 aa4.92□□□□□ -1.62
NUP88-212ENST00000576708 GLP1RP43220 463 aa4.92□□□□□ -1.62
NUP88-212ENST00000576708 SOX2P48431 317 aa4.92□□□□□ -1.62
NUP88-212ENST00000576708 GNG10P50151 68 aa4.92□□□□□ -1.62
NUP88-212ENST00000576708 CCR9P51686 369 aa4.92□□□□□ -1.62
NUP88-212ENST00000576708 ARPC4P59998 168 aa4.92□□□□□ -1.62
NUP88-212ENST00000576708 SNRPGP62308 76 aaKnown RBP4.92□□□□□ -1.62
NUP88-212ENST00000576708 CBX3Q13185 183 aa4.92□□□□□ -1.62
NUP88-212ENST00000576708 HNF4GQ14541 408 aa4.92□□□□□ -1.62
NUP88-212ENST00000576708 KISS1Q15726 138 aa4.92□□□□□ -1.62
NUP88-212ENST00000576708 PIGYQ3MUY2 71 aa4.92□□□□□ -1.62
NUP88-212ENST00000576708 DEFB121Q5J5C9 76 aa4.92□□□□□ -1.62
NUP88-212ENST00000576708 ZNF691Q5VV52 312 aa4.92□□□□□ -1.62
NUP88-212ENST00000576708 RTN4RL2Q86UN3 420 aa4.92□□□□□ -1.62
NUP88-212ENST00000576708 SATL1Q86VE3 508 aa4.92□□□□□ -1.62
NUP88-212ENST00000576708 DRAM1Q8N682 238 aa4.92□□□□□ -1.62
NUP88-212ENST00000576708 ACBD7Q8N6N7 88 aa4.92□□□□□ -1.62
NUP88-212ENST00000576708 OR4D6Q8NGJ1 314 aa4.92□□□□□ -1.62
NUP88-212ENST00000576708 OR51A2Q8NGJ7 313 aa4.92□□□□□ -1.62
NUP88-212ENST00000576708 OR13A1Q8NGR1 328 aa4.92□□□□□ -1.62
NUP88-212ENST00000576708 OR56B4Q8NH76 319 aa4.92□□□□□ -1.62
NUP88-212ENST00000576708 UBALD1Q8TB05 177 aa4.92□□□□□ -1.62
NUP88-212ENST00000576708 PLPPR1Q8TBJ4 325 aa4.92□□□□□ -1.62
NUP88-212ENST00000576708 ZNF596Q8TC21 504 aa4.92□□□□□ -1.62
NUP88-212ENST00000576708 RGP1Q92546 391 aaPredicted RBP4.92□□□□□ -1.62
NUP88-212ENST00000576708 NOL4LQ96MY1 436 aaPredicted RBP4.92□□□□□ -1.62
NUP88-212ENST00000576708 PDCD1LG2Q9BQ51 273 aa4.92□□□□□ -1.62
NUP88-212ENST00000576708 ZNF649Q9BS31 505 aa4.92□□□□□ -1.62
NUP88-212ENST00000576708 ALG8Q9BVK2 526 aa4.92□□□□□ -1.62
NUP88-212ENST00000576708 TSSC4Q9Y5U2 329 aaPredicted RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms