RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 DAPP51397 102 aa6.94□□□□□ -1.3
SMG6-218ENST00000575454 SLURP1P55000 103 aa6.94□□□□□ -1.3
SMG6-218ENST00000575454 RSU1Q15404 277 aa6.94□□□□□ -1.3
SMG6-218ENST00000575454 HAGHQ16775 308 aa6.94□□□□□ -1.3
SMG6-218ENST00000575454 TP53I3Q53FA7 332 aa6.94□□□□□ -1.3
SMG6-218ENST00000575454 PYHIN1Q6K0P9 492 aa6.94□□□□□ -1.3
SMG6-218ENST00000575454 LIN54Q6MZP7 749 aa6.94□□□□□ -1.3
SMG6-218ENST00000575454 Q8N1Y9 231 aa6.94□□□□□ -1.3
SMG6-218ENST00000575454 SUMF2Q8NBJ7 301 aa6.94□□□□□ -1.3
SMG6-218ENST00000575454 OR8J1Q8NGP2 316 aa6.94□□□□□ -1.3
SMG6-218ENST00000575454 PLPPR1Q8TBJ4 325 aa6.94□□□□□ -1.3
SMG6-218ENST00000575454 MRPL48Q96GC5 212 aaKnown RBP6.94□□□□□ -1.3
SMG6-218ENST00000575454 ZNF251Q9BRH9 671 aa6.94□□□□□ -1.3
SMG6-218ENST00000575454 TUBA4BQ9H853 241 aa6.94□□□□□ -1.3
SMG6-218ENST00000575454 PARP11Q9NR21 331 aa6.94□□□□□ -1.3
SMG6-218ENST00000575454 GNG12Q9UBI6 72 aa6.94□□□□□ -1.3
SMG6-218ENST00000575454 KIAA1109Q2LD37 5005 aa6.93□□□□□ -1.3
SMG6-218ENST00000575454 M0R129 80 aa6.93□□□□□ -1.3
SMG6-218ENST00000575454 ATP6V0E1O15342 81 aa6.93□□□□□ -1.3
SMG6-218ENST00000575454 LANCL1O43813 399 aa6.93□□□□□ -1.3
SMG6-218ENST00000575454 FKBP6O75344 327 aa6.93□□□□□ -1.3
SMG6-218ENST00000575454 OR7C1O76099 320 aaPredicted RBP6.93□□□□□ -1.3
SMG6-218ENST00000575454 IGLV1-51P01701 117 aa6.93□□□□□ -1.3
SMG6-218ENST00000575454 CALB2P22676 271 aa6.93□□□□□ -1.3
SMG6-218ENST00000575454 VHLP40337 213 aa6.93□□□□□ -1.3
SMG6-218ENST00000575454 ZNF85Q03923 595 aa6.93□□□□□ -1.3
SMG6-218ENST00000575454 TMEM267Q0VDI3 215 aaPredicted RBP6.93□□□□□ -1.3
SMG6-218ENST00000575454 RAB40BQ12829 278 aa6.93□□□□□ -1.3
SMG6-218ENST00000575454 NHLRC3Q5JS37 347 aa6.93□□□□□ -1.3
SMG6-218ENST00000575454 LINC00596Q86U02 117 aa6.93□□□□□ -1.3
SMG6-218ENST00000575454 SPATA24Q86W54 205 aa6.93□□□□□ -1.3
SMG6-218ENST00000575454 STX19Q8N4C7 294 aa6.93□□□□□ -1.3
SMG6-218ENST00000575454 TNFAIP8L1Q8WVP5 186 aa6.93□□□□□ -1.3
SMG6-218ENST00000575454 GPER1Q99527 375 aa6.93□□□□□ -1.3
SMG6-218ENST00000575454 JAM3Q9BX67 310 aa6.93□□□□□ -1.3
SMG6-218ENST00000575454 ALX4Q9H161 411 aaPredicted RBP6.93□□□□□ -1.3
SMG6-218ENST00000575454 PAK1IP1Q9NWT1 392 aaPredicted RBP6.93□□□□□ -1.3
SMG6-218ENST00000575454 KIAA1456Q9P272 454 aa6.93□□□□□ -1.3
SMG6-218ENST00000575454 RNF150Q9ULK6 438 aa6.93□□□□□ -1.3
SMG6-218ENST00000575454 FOXA2Q9Y261 457 aaPredicted RBP6.93□□□□□ -1.3
SMG6-218ENST00000575454 ST3GAL6Q9Y274 331 aa6.93□□□□□ -1.3
SMG6-218ENST00000575454 ALMS1Q8TCU4 4167 aa6.92□□□□□ -1.3
SMG6-218ENST00000575454 IGHV7-81A0A0B4J1V7 117 aa6.92□□□□□ -1.3
SMG6-218ENST00000575454 TRAV39A0A0B4J263 110 aa6.92□□□□□ -1.3
SMG6-218ENST00000575454 DAPL1A0PJW8 107 aa6.92□□□□□ -1.3
SMG6-218ENST00000575454 NBR2O15453 112 aa6.92□□□□□ -1.3
SMG6-218ENST00000575454 ZNF780AO75290 641 aaPredicted RBP6.92□□□□□ -1.3
SMG6-218ENST00000575454 RAB3AP20336 220 aa6.92□□□□□ -1.3
SMG6-218ENST00000575454 ZP3P21754 424 aa6.92□□□□□ -1.3
SMG6-218ENST00000575454 NANOS3P60323 173 aaKnown RBP6.92□□□□□ -1.3
SMG6-218ENST00000575454 ACTBP60709 375 aa6.92□□□□□ -1.3
SMG6-218ENST00000575454 LSAMPQ13449 338 aa6.92□□□□□ -1.3
SMG6-218ENST00000575454 ZSCAN26Q16670 478 aa6.92□□□□□ -1.3
SMG6-218ENST00000575454 C5orf64Q2M2E5 130 aa6.92□□□□□ -1.3
SMG6-218ENST00000575454 PIGYQ3MUY2 71 aa6.92□□□□□ -1.3
SMG6-218ENST00000575454 C6orf183Q5T699 404 aa6.92□□□□□ -1.3
SMG6-218ENST00000575454 ZNF660Q6AZW8 331 aaPredicted RBP6.92□□□□□ -1.3
SMG6-218ENST00000575454 FAM53AQ6NSI3 398 aaPredicted RBP6.92□□□□□ -1.3
SMG6-218ENST00000575454 TRAT1Q6PIZ9 186 aa6.92□□□□□ -1.3
SMG6-218ENST00000575454 ASCL4Q6XD76 172 aa6.92□□□□□ -1.3
SMG6-218ENST00000575454 GTSCR1Q86UQ5 136 aa6.92□□□□□ -1.3
SMG6-218ENST00000575454 PARP16Q8N5Y8 322 aa6.92□□□□□ -1.3
SMG6-218ENST00000575454 OR51A4Q8NGJ6 313 aa6.92□□□□□ -1.3
SMG6-218ENST00000575454 OR52N1Q8NH53 320 aa6.92□□□□□ -1.3
SMG6-218ENST00000575454 S100A13Q99584 98 aa6.92□□□□□ -1.3
SMG6-218ENST00000575454 RSRP1Q9BUV0 290 aa6.92□□□□□ -1.3
SMG6-218ENST00000575454 METTL9Q9H1A3 318 aa6.92□□□□□ -1.3
SMG6-218ENST00000575454 RIBC2Q9H4K1 309 aa6.92□□□□□ -1.3
SMG6-218ENST00000575454 SPACA1Q9HBV2 294 aa6.92□□□□□ -1.3
SMG6-218ENST00000575454 TPSG1Q9NRR2 321 aa6.92□□□□□ -1.3
SMG6-218ENST00000575454 DHDHQ9UQ10 334 aa6.92□□□□□ -1.3
SMG6-218ENST00000575454 IGHV4OR15-8A0A075B7B6 117 aa6.91□□□□□ -1.3
SMG6-218ENST00000575454 A0A087WW49 117 aa6.91□□□□□ -1.3
SMG6-218ENST00000575454 A0A1W2PN81 502 aa6.91□□□□□ -1.3
SMG6-218ENST00000575454 TMEM212A6NML5 194 aa6.91□□□□□ -1.3
SMG6-218ENST00000575454 OR4C45A6NMZ5 311 aa6.91□□□□□ -1.3
SMG6-218ENST00000575454 G3V2T6 193 aa6.91□□□□□ -1.3
SMG6-218ENST00000575454 MITFO75030 526 aaPredicted RBP6.91□□□□□ -1.3
SMG6-218ENST00000575454 HTR3BO95264 441 aa6.91□□□□□ -1.3
SMG6-218ENST00000575454 MT-ND4P03905 459 aa6.91□□□□□ -1.3
SMG6-218ENST00000575454 EPHA2P29317 976 aa6.91□□□□□ -1.3
SMG6-218ENST00000575454 BLVRBP30043 206 aaPredicted RBP6.91□□□□□ -1.3
SMG6-218ENST00000575454 CHRNA7P36544 502 aa6.91□□□□□ -1.3
SMG6-218ENST00000575454 CRIP2P52943 208 aaPredicted RBP6.91□□□□□ -1.3
SMG6-218ENST00000575454 MRPL28Q13084 256 aaKnown RBP6.91□□□□□ -1.3
SMG6-218ENST00000575454 ALKBH1Q13686 389 aaKnown RBP6.91□□□□□ -1.3
SMG6-218ENST00000575454 FLOT2Q14254 428 aa6.91□□□□□ -1.3
SMG6-218ENST00000575454 ECSCRQ19T08 205 aa6.91□□□□□ -1.3
SMG6-218ENST00000575454 MPV17LQ2QL34 196 aa6.91□□□□□ -1.3
SMG6-218ENST00000575454 CT45A1Q5HYN5 189 aa6.91□□□□□ -1.3
SMG6-218ENST00000575454 KDM4DQ6B0I6 523 aa6.91□□□□□ -1.3
SMG6-218ENST00000575454 ZNF497Q6ZNH5 498 aa6.91□□□□□ -1.3
SMG6-218ENST00000575454 SATL1Q86VE3 508 aa6.91□□□□□ -1.3
SMG6-218ENST00000575454 ZDHHC13Q8IUH4 622 aa6.91□□□□□ -1.3
SMG6-218ENST00000575454 ZNF439Q8NDP4 499 aa6.91□□□□□ -1.3
SMG6-218ENST00000575454 NPBQ8NG41 125 aa6.91□□□□□ -1.3
SMG6-218ENST00000575454 OR10AC1Q8NH08 325 aa6.91□□□□□ -1.3
SMG6-218ENST00000575454 CT45A3Q8NHU0 189 aa6.91□□□□□ -1.3
SMG6-218ENST00000575454 NEK7Q8TDX7 302 aa6.91□□□□□ -1.3
SMG6-218ENST00000575454 CCDC107Q8WV48 283 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms