RNA–Protein interactions for RNA: ENST00000575431.1

CCDC40-214, Transcript of coiled-coil domain containing 40, humanhuman

TSL 3

Gene CCDC40, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-214ENST00000575431 PRAMEF5Q5TYX0 476 aa7.78□□□□□ -1.16
CCDC40-214ENST00000575431 STEAP3Q658P3 488 aa7.78□□□□□ -1.16
CCDC40-214ENST00000575431 ZNF880Q6PDB4 577 aa7.78□□□□□ -1.16
CCDC40-214ENST00000575431 C8orf31Q8N9H6 132 aa7.78□□□□□ -1.16
CCDC40-214ENST00000575431 OR5R1Q8NH85 324 aa7.78□□□□□ -1.16
CCDC40-214ENST00000575431 LGALS14Q8TCE9 139 aa7.78□□□□□ -1.16
CCDC40-214ENST00000575431 DYRK2Q92630 601 aa7.78□□□□□ -1.16
CCDC40-214ENST00000575431 GALMQ96C23 342 aa7.78□□□□□ -1.16
CCDC40-214ENST00000575431 ZNF48Q96MX3 618 aaPredicted RBP7.78□□□□□ -1.16
CCDC40-214ENST00000575431 MEGF9Q9H1U4 602 aa7.78□□□□□ -1.16
CCDC40-214ENST00000575431 TAF9BQ9HBM6 251 aa7.78□□□□□ -1.16
CCDC40-214ENST00000575431 RHBDL2Q9NX52 303 aa7.78□□□□□ -1.16
CCDC40-214ENST00000575431 DPM3Q9P2X0 92 aa7.78□□□□□ -1.16
CCDC40-214ENST00000575431 AMMECR1Q9Y4X0 333 aaPredicted RBP7.78□□□□□ -1.16
CCDC40-214ENST00000575431 MTORP42345 2549 aa7.77□□□□□ -1.17
CCDC40-214ENST00000575431 A0A0B4J203 849 aa7.77□□□□□ -1.17
CCDC40-214ENST00000575431 A0A1W2PRD5 423 aa7.77□□□□□ -1.17
CCDC40-214ENST00000575431 A0A1W2PRF3 423 aa7.77□□□□□ -1.17
CCDC40-214ENST00000575431 A0A1W2PRM7 423 aa7.77□□□□□ -1.17
CCDC40-214ENST00000575431 OOSP1A8MZH6 123 aa7.77□□□□□ -1.17
CCDC40-214ENST00000575431 C12orf77C9JDV5 145 aa7.77□□□□□ -1.17
CCDC40-214ENST00000575431 SDCBPO00560 298 aaPredicted RBP7.77□□□□□ -1.17
CCDC40-214ENST00000575431 RGS11O94810 467 aa7.77□□□□□ -1.17
CCDC40-214ENST00000575431 VENTXO95231 258 aa7.77□□□□□ -1.17
CCDC40-214ENST00000575431 IGLV1-47P01700 117 aa7.77□□□□□ -1.17
CCDC40-214ENST00000575431 HBZP02008 142 aa7.77□□□□□ -1.17
CCDC40-214ENST00000575431 SOX6P35712 828 aa7.77□□□□□ -1.17
CCDC40-214ENST00000575431 TALDO1P37837 337 aa7.77□□□□□ -1.17
CCDC40-214ENST00000575431 KIR2DS4P43632 304 aa7.77□□□□□ -1.17
CCDC40-214ENST00000575431 IER3P46695 156 aa7.77□□□□□ -1.17
CCDC40-214ENST00000575431 RPL15P61313 204 aaKnown RBP7.77□□□□□ -1.17
CCDC40-214ENST00000575431 HTD2P86397 168 aa7.77□□□□□ -1.17
CCDC40-214ENST00000575431 ARFRP1Q13795 201 aa7.77□□□□□ -1.17
CCDC40-214ENST00000575431 KIR2DS1Q14954 304 aa7.77□□□□□ -1.17
CCDC40-214ENST00000575431 SRSF7Q16629 238 aaKnown RBP eCLIP7.77□□□□□ -1.17
CCDC40-214ENST00000575431 PNLIPRP3Q17RR3 467 aa7.77□□□□□ -1.17
CCDC40-214ENST00000575431 HLA-DRB5Q30154 266 aa7.77□□□□□ -1.17
CCDC40-214ENST00000575431 LY6G6FQ5SQ64 297 aa7.77□□□□□ -1.17
CCDC40-214ENST00000575431 CCDC144NLQ6NUI1 221 aa7.77□□□□□ -1.17
CCDC40-214ENST00000575431 MZT2AQ6P582 158 aa7.77□□□□□ -1.17
CCDC40-214ENST00000575431 CLVS1Q8IUQ0 354 aaPredicted RBP7.77□□□□□ -1.17
CCDC40-214ENST00000575431 ZDHHC22Q8N966 263 aa7.77□□□□□ -1.17
CCDC40-214ENST00000575431 RFESDQ8TAC1 157 aa7.77□□□□□ -1.17
CCDC40-214ENST00000575431 FAM216AQ8WUB2 273 aa7.77□□□□□ -1.17
CCDC40-214ENST00000575431 S100A16Q96FQ6 103 aaKnown RBP7.77□□□□□ -1.17
CCDC40-214ENST00000575431 ABCG5Q9H222 651 aa7.77□□□□□ -1.17
CCDC40-214ENST00000575431 DCSTAMPQ9H295 470 aa7.77□□□□□ -1.17
CCDC40-214ENST00000575431 GFOD1Q9NXC2 390 aa7.77□□□□□ -1.17
CCDC40-214ENST00000575431 ZNRD1Q9P1U0 126 aa7.77□□□□□ -1.17
CCDC40-214ENST00000575431 AK3Q9UIJ7 227 aa7.77□□□□□ -1.17
CCDC40-214ENST00000575431 JPT1Q9UK76 154 aa7.77□□□□□ -1.17
CCDC40-214ENST00000575431 TRAV39A0A0B4J263 110 aa7.76□□□□□ -1.17
CCDC40-214ENST00000575431 DNAJC9-AS1A6NH13 148 aa7.76□□□□□ -1.17
CCDC40-214ENST00000575431 VGLL3A8MV65 326 aa7.76□□□□□ -1.17
CCDC40-214ENST00000575431 BUB1B-PAK6H3BSN5 160 aa7.76□□□□□ -1.17
CCDC40-214ENST00000575431 J3QR06 171 aa7.76□□□□□ -1.17
CCDC40-214ENST00000575431 HOXA3O43365 443 aaPredicted RBP7.76□□□□□ -1.17
CCDC40-214ENST00000575431 YPEL1O60688 119 aa7.76□□□□□ -1.17
CCDC40-214ENST00000575431 DIRAS3O95661 229 aa7.76□□□□□ -1.17
CCDC40-214ENST00000575431 LPLP06858 475 aa7.76□□□□□ -1.17
CCDC40-214ENST00000575431 RNASE1P07998 156 aaKnown RBP7.76□□□□□ -1.17
CCDC40-214ENST00000575431 ZNF182P17025 639 aaPredicted RBP7.76□□□□□ -1.17
CCDC40-214ENST00000575431 IL3RAP26951 378 aa7.76□□□□□ -1.17
CCDC40-214ENST00000575431 TGFBR1P36897 503 aa7.76□□□□□ -1.17
CCDC40-214ENST00000575431 GDNFP39905 211 aa7.76□□□□□ -1.17
CCDC40-214ENST00000575431 DYNLT3P51808 116 aa7.76□□□□□ -1.17
CCDC40-214ENST00000575431 LOXL3P58215 753 aa7.76□□□□□ -1.17
CCDC40-214ENST00000575431 UBA52P62987 128 aaKnown RBP7.76□□□□□ -1.17
CCDC40-214ENST00000575431 PRB3Q04118 309 aaPredicted RBP7.76□□□□□ -1.17
CCDC40-214ENST00000575431 SLC9A3R2Q15599 337 aa7.76□□□□□ -1.17
CCDC40-214ENST00000575431 HMGN3Q15651 99 aa7.76□□□□□ -1.17
CCDC40-214ENST00000575431 MOGAT2Q3SYC2 334 aa7.76□□□□□ -1.17
CCDC40-214ENST00000575431 CDNFQ49AH0 187 aa7.76□□□□□ -1.17
CCDC40-214ENST00000575431 UBE2NLQ5JXB2 153 aa7.76□□□□□ -1.17
CCDC40-214ENST00000575431 LINC00311Q8N616 119 aa7.76□□□□□ -1.17
CCDC40-214ENST00000575431 DTX3Q8N9I9 347 aa7.76□□□□□ -1.17
CCDC40-214ENST00000575431 OR4P4Q8NGL7 312 aa7.76□□□□□ -1.17
CCDC40-214ENST00000575431 OR5H6Q8NGV6 325 aa7.76□□□□□ -1.17
CCDC40-214ENST00000575431 NDNFQ8TB73 568 aa7.76□□□□□ -1.17
CCDC40-214ENST00000575431 SETD6Q8TBK2 473 aa7.76□□□□□ -1.17
CCDC40-214ENST00000575431 YPEL2Q96QA6 119 aa7.76□□□□□ -1.17
CCDC40-214ENST00000575431 OCSTAMPQ9BR26 566 aa7.76□□□□□ -1.17
CCDC40-214ENST00000575431 NAA50Q9GZZ1 169 aaKnown RBP7.76□□□□□ -1.17
CCDC40-214ENST00000575431 MMP28Q9H239 520 aa7.76□□□□□ -1.17
CCDC40-214ENST00000575431 GHITMQ9H3K2 345 aa7.76□□□□□ -1.17
CCDC40-214ENST00000575431 ZNF286AQ9HBT8 521 aa7.76□□□□□ -1.17
CCDC40-214ENST00000575431 Q9N2K0 584 aa7.76□□□□□ -1.17
CCDC40-214ENST00000575431 OR2S2Q9NQN1 319 aa7.76□□□□□ -1.17
CCDC40-214ENST00000575431 GNG12Q9UBI6 72 aa7.76□□□□□ -1.17
CCDC40-214ENST00000575431 PSG11Q9UQ72 335 aa7.76□□□□□ -1.17
CCDC40-214ENST00000575431 KCNK7Q9Y2U2 307 aa7.76□□□□□ -1.17
CCDC40-214ENST00000575431 SOX21Q9Y651 276 aaPredicted RBP7.76□□□□□ -1.17
CCDC40-214ENST00000575431 KIAA2026Q5HYC2 2103 aa7.75□□□□□ -1.17
CCDC40-214ENST00000575431 A0A075B6Q4 140 aa7.75□□□□□ -1.17
CCDC40-214ENST00000575431 MDFIC2A0A1B0GVS7 189 aa7.75□□□□□ -1.17
CCDC40-214ENST00000575431 SMIM31A0A1B0GVY4 71 aa7.75□□□□□ -1.17
CCDC40-214ENST00000575431 TRDCB7Z8K6 153 aa7.75□□□□□ -1.17
CCDC40-214ENST00000575431 APOA1P02647 267 aa7.75□□□□□ -1.17
CCDC40-214ENST00000575431 GNB3P16520 340 aa7.75□□□□□ -1.17
CCDC40-214ENST00000575431 DTYMKP23919 212 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms