RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 ZNF782Q6ZMW2 699 aaPredicted RBP13.99□□□□□ -0.17
NUP88-210ENST00000574867 OR52M1Q8NGK5 317 aa13.99□□□□□ -0.17
NUP88-210ENST00000574867 NANPQ8TBE9 248 aa13.99□□□□□ -0.17
NUP88-210ENST00000574867 SCPEP1Q9HB40 452 aa13.99□□□□□ -0.17
NUP88-210ENST00000574867 PTTG2Q9NZH5 202 aa13.99□□□□□ -0.17
NUP88-210ENST00000574867 TRAV40A0A0B4J280 105 aa13.98□□□□□ -0.17
NUP88-210ENST00000574867 FSHBP01225 129 aa13.98□□□□□ -0.17
NUP88-210ENST00000574867 GPR157Q5UAW9 335 aa13.98□□□□□ -0.17
NUP88-210ENST00000574867 SNX29P2Q8IUI4 249 aa13.98□□□□□ -0.17
NUP88-210ENST00000574867 PRR18Q8N4B5 295 aa13.98□□□□□ -0.17
NUP88-210ENST00000574867 OR13D1Q8NGV5 346 aa13.98□□□□□ -0.17
NUP88-210ENST00000574867 RFESDQ8TAC1 157 aa13.98□□□□□ -0.17
NUP88-210ENST00000574867 GALMQ96C23 342 aa13.98□□□□□ -0.17
NUP88-210ENST00000574867 OCSTAMPQ9BR26 566 aa13.98□□□□□ -0.17
NUP88-210ENST00000574867 TMEM133Q9H2Q1 129 aa13.98□□□□□ -0.17
NUP88-210ENST00000574867 ZNF286AQ9HBT8 521 aa13.98□□□□□ -0.17
NUP88-210ENST00000574867 CDC42EP3Q9UKI2 254 aa13.98□□□□□ -0.17
NUP88-210ENST00000574867 TRDCB7Z8K6 153 aa13.97□□□□□ -0.17
NUP88-210ENST00000574867 MMP23AO75900 390 aa13.97□□□□□ -0.17
NUP88-210ENST00000574867 LPLP06858 475 aa13.97□□□□□ -0.17
NUP88-210ENST00000574867 PTHLHP12272 177 aa13.97□□□□□ -0.17
NUP88-210ENST00000574867 PYHIN1Q6K0P9 492 aa13.97□□□□□ -0.17
NUP88-210ENST00000574867 OR6Q1Q8NGQ2 317 aa13.97□□□□□ -0.17
NUP88-210ENST00000574867 LHX4Q969G2 390 aa13.97□□□□□ -0.17
NUP88-210ENST00000574867 A0A087X0M5 115 aa13.97□□□□□ -0.17
NUP88-210ENST00000574867 A0A1B0GX30 115 aa13.97□□□□□ -0.17
NUP88-210ENST00000574867 SULT1C2O00338 296 aa13.97□□□□□ -0.17
NUP88-210ENST00000574867 SDCBPO00560 298 aaPredicted RBP13.97□□□□□ -0.17
NUP88-210ENST00000574867 BPIFB3P59826 476 aa13.97□□□□□ -0.17
NUP88-210ENST00000574867 MRPS10P82664 201 aaKnown RBP13.97□□□□□ -0.17
NUP88-210ENST00000574867 HTD2P86397 168 aa13.97□□□□□ -0.17
NUP88-210ENST00000574867 IL18Q14116 193 aa13.97□□□□□ -0.17
NUP88-210ENST00000574867 Q71RC1 249 aaPredicted RBP13.97□□□□□ -0.17
NUP88-210ENST00000574867 OR1L1Q8NH94 360 aa13.97□□□□□ -0.17
NUP88-210ENST00000574867 ZNF230Q9UIE0 474 aaPredicted RBP13.97□□□□□ -0.17
NUP88-210ENST00000574867 RNASEK-C17orf49H0YIS7 233 aa13.96□□□□□ -0.17
NUP88-210ENST00000574867 DIRAS3O95661 229 aa13.96□□□□□ -0.17
NUP88-210ENST00000574867 GDNFP39905 211 aa13.96□□□□□ -0.17
NUP88-210ENST00000574867 UBE2E1P51965 193 aa13.96□□□□□ -0.17
NUP88-210ENST00000574867 STEAP3Q658P3 488 aa13.96□□□□□ -0.17
NUP88-210ENST00000574867 OR4A4PQ8NGN8 299 aa13.96□□□□□ -0.17
NUP88-210ENST00000574867 GCDHQ92947 438 aaPredicted RBP13.96□□□□□ -0.17
NUP88-210ENST00000574867 SUCNR1Q9BXA5 334 aa13.96□□□□□ -0.17
NUP88-210ENST00000574867 IFT46Q9NQC8 304 aa13.96□□□□□ -0.17
NUP88-210ENST00000574867 JPT1Q9UK76 154 aa13.96□□□□□ -0.17
NUP88-210ENST00000574867 CENPVL3A0A0U1RRI6 287 aa13.95□□□□□ -0.18
NUP88-210ENST00000574867 FABP12A6NFH5 140 aa13.95□□□□□ -0.18
NUP88-210ENST00000574867 FABP7O15540 132 aa13.95□□□□□ -0.18
NUP88-210ENST00000574867 NFYBP25208 207 aa13.95□□□□□ -0.18
NUP88-210ENST00000574867 CD34P28906 385 aa13.95□□□□□ -0.18
NUP88-210ENST00000574867 MADCAM1Q13477 382 aa13.95□□□□□ -0.18
NUP88-210ENST00000574867 Q3ZCU0 254 aa13.95□□□□□ -0.18
NUP88-210ENST00000574867 KLF17Q5JT82 389 aaPredicted RBP13.95□□□□□ -0.18
NUP88-210ENST00000574867 LINC00299Q6ZSB3 139 aa13.95□□□□□ -0.18
NUP88-210ENST00000574867 CCDC190Q86UF4 302 aa13.95□□□□□ -0.18
NUP88-210ENST00000574867 HOGA1Q86XE5 327 aa13.95□□□□□ -0.18
NUP88-210ENST00000574867 UBALD1Q8TB05 177 aa13.95□□□□□ -0.18
NUP88-210ENST00000574867 GPX8Q8TED1 209 aa13.95□□□□□ -0.18
NUP88-210ENST00000574867 MAFIPQ8WZ33 124 aa13.95□□□□□ -0.18
NUP88-210ENST00000574867 ABHD1Q96SE0 405 aa13.95□□□□□ -0.18
NUP88-210ENST00000574867 ST6GALNAC5Q9BVH7 336 aa13.95□□□□□ -0.18
NUP88-210ENST00000574867 CLEC7AQ9BXN2 247 aa13.95□□□□□ -0.18
NUP88-210ENST00000574867 GFOD1Q9NXC2 390 aa13.95□□□□□ -0.18
NUP88-210ENST00000574867 IGHV2-26A0A0B4J1V2 119 aa13.95□□□□□ -0.18
NUP88-210ENST00000574867 IGHV1-69DA0A0B4J2H0 117 aa13.95□□□□□ -0.18
NUP88-210ENST00000574867 IGHV1-69P01742 117 aa13.95□□□□□ -0.18
NUP88-210ENST00000574867 IGHV4-38-2P0DP08 117 aa13.95□□□□□ -0.18
NUP88-210ENST00000574867 COX7A1P24310 79 aa13.95□□□□□ -0.18
NUP88-210ENST00000574867 SRP14P37108 136 aaKnown RBP13.95□□□□□ -0.18
NUP88-210ENST00000574867 DLX1P56177 255 aa13.95□□□□□ -0.18
NUP88-210ENST00000574867 LOXL3P58215 753 aa13.95□□□□□ -0.18
NUP88-210ENST00000574867 KLRD1Q13241 179 aa13.95□□□□□ -0.18
NUP88-210ENST00000574867 LTC4SQ16873 150 aa13.95□□□□□ -0.18
NUP88-210ENST00000574867 SPANXN2Q5MJ10 180 aa13.95□□□□□ -0.18
NUP88-210ENST00000574867 HCP5Q6MZN7 132 aa13.95□□□□□ -0.18
NUP88-210ENST00000574867 FAM131AQ6UXB0 335 aa13.95□□□□□ -0.18
NUP88-210ENST00000574867 PNKDQ8N490 385 aa13.95□□□□□ -0.18
NUP88-210ENST00000574867 OR11H6Q8NGC7 330 aa13.95□□□□□ -0.18
NUP88-210ENST00000574867 IL1F10Q8WWZ1 152 aa13.95□□□□□ -0.18
NUP88-210ENST00000574867 BEX2Q9BXY8 128 aa13.95□□□□□ -0.18
NUP88-210ENST00000574867 OR2S2Q9NQN1 319 aa13.95□□□□□ -0.18
NUP88-210ENST00000574867 GNG12Q9UBI6 72 aa13.95□□□□□ -0.18
NUP88-210ENST00000574867 NUP50Q9UKX7 468 aa13.95□□□□□ -0.18
NUP88-210ENST00000574867 ANAPC10Q9UM13 185 aa13.95□□□□□ -0.18
NUP88-210ENST00000574867 SONP18583 2426 aaKnown RBP13.94□□□□□ -0.18
NUP88-210ENST00000574867 MEIOCA2RUB1 952 aa13.94□□□□□ -0.18
NUP88-210ENST00000574867 INAFM1C9JVW0 142 aa13.94□□□□□ -0.18
NUP88-210ENST00000574867 CTDSPLO15194 276 aa13.94□□□□□ -0.18
NUP88-210ENST00000574867 PTBP1P26599 531 aaKnown RBP eCLIP13.94□□□□□ -0.18
NUP88-210ENST00000574867 SCGB2A2Q13296 93 aa13.94□□□□□ -0.18
NUP88-210ENST00000574867 BEST4Q8NFU0 473 aa13.94□□□□□ -0.18
NUP88-210ENST00000574867 SOSTQ9BQB4 213 aa13.94□□□□□ -0.18
NUP88-210ENST00000574867 CABLES2Q9BTV7 478 aa13.94□□□□□ -0.18
NUP88-210ENST00000574867 NSD1Q96L73 2696 aaPredicted RBP13.94□□□□□ -0.18
NUP88-210ENST00000574867 GABARAPH6UMI1 98 aa13.94□□□□□ -0.18
NUP88-210ENST00000574867 RGS11O94810 467 aa13.94□□□□□ -0.18
NUP88-210ENST00000574867 SCTP09683 121 aa13.94□□□□□ -0.18
NUP88-210ENST00000574867 ETV6P41212 452 aa13.94□□□□□ -0.18
NUP88-210ENST00000574867 IL17RELQ6ZVW7 336 aa13.94□□□□□ -0.18
NUP88-210ENST00000574867 ABHD12Q8N2K0 398 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms