RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 TOMM20LQ6UXN7 152 aa12.36□□□□□ -0.43
SMG6-215ENST00000574501 CENPVQ7Z7K6 275 aaPredicted RBP12.36□□□□□ -0.43
SMG6-215ENST00000574501 MRPL30Q8TCC3 161 aaKnown RBP12.36□□□□□ -0.43
SMG6-215ENST00000574501 AGMATQ9BSE5 352 aa12.36□□□□□ -0.43
SMG6-215ENST00000574501 RIMS4Q9H426 269 aaPredicted RBP12.36□□□□□ -0.43
SMG6-215ENST00000574501 SLC39A9Q9NUM3 307 aa12.36□□□□□ -0.43
SMG6-215ENST00000574501 AURKAIP1Q9NWT8 199 aaPredicted RBP12.36□□□□□ -0.43
SMG6-215ENST00000574501 HS3ST3A1Q9Y663 406 aa12.36□□□□□ -0.43
SMG6-215ENST00000574501 SLC22A20A6NK97 555 aa12.35□□□□□ -0.43
SMG6-215ENST00000574501 UCP1P25874 307 aa12.35□□□□□ -0.43
SMG6-215ENST00000574501 TNFSF10P50591 281 aa12.35□□□□□ -0.43
SMG6-215ENST00000574501 MYPOPQ86VE0 399 aaPredicted RBP12.35□□□□□ -0.43
SMG6-215ENST00000574501 OR4F5Q8NH21 305 aa12.35□□□□□ -0.43
SMG6-215ENST00000574501 BADQ92934 168 aa12.35□□□□□ -0.43
SMG6-215ENST00000574501 GPR146Q96CH1 333 aa12.35□□□□□ -0.43
SMG6-215ENST00000574501 OR4F4Q96R69 305 aa12.35□□□□□ -0.43
SMG6-215ENST00000574501 IGHV3-15A0A0B4J1V0 119 aa12.35□□□□□ -0.43
SMG6-215ENST00000574501 HSPB6O14558 160 aa12.35□□□□□ -0.43
SMG6-215ENST00000574501 TCF21O43680 179 aa12.35□□□□□ -0.43
SMG6-215ENST00000574501 IGKV1D-33P01593 117 aa12.35□□□□□ -0.43
SMG6-215ENST00000574501 IGKV1-33P01594 117 aa12.35□□□□□ -0.43
SMG6-215ENST00000574501 GYPAP02724 150 aa12.35□□□□□ -0.43
SMG6-215ENST00000574501 TMEM41BQ5BJD5 291 aa12.35□□□□□ -0.43
SMG6-215ENST00000574501 FAM78BQ5VT40 261 aa12.35□□□□□ -0.43
SMG6-215ENST00000574501 TMEM211Q6ICI0 200 aa12.35□□□□□ -0.43
SMG6-215ENST00000574501 CISD2Q8N5K1 135 aaKnown RBP12.35□□□□□ -0.43
SMG6-215ENST00000574501 ZNF525Q8N782 197 aa12.35□□□□□ -0.43
SMG6-215ENST00000574501 RASL10BQ96S79 203 aa12.35□□□□□ -0.43
SMG6-215ENST00000574501 PAM16Q9Y3D7 125 aa12.35□□□□□ -0.43
SMG6-215ENST00000574501 TRAPPC1Q9Y5R8 145 aa12.35□□□□□ -0.43
SMG6-215ENST00000574501 CRYABP02511 175 aaKnown RBP12.34□□□□□ -0.43
SMG6-215ENST00000574501 IGHV4-34P06331 123 aa12.34□□□□□ -0.43
SMG6-215ENST00000574501 MLF1P58340 268 aa12.34□□□□□ -0.43
SMG6-215ENST00000574501 HIST1H3AP68431 136 aa12.34□□□□□ -0.43
SMG6-215ENST00000574501 CNN3Q15417 329 aaKnown RBP12.34□□□□□ -0.43
SMG6-215ENST00000574501 SHBQ15464 509 aa12.34□□□□□ -0.43
SMG6-215ENST00000574501 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.34□□□□□ -0.43
SMG6-215ENST00000574501 Q6ZRM9 215 aa12.34□□□□□ -0.43
SMG6-215ENST00000574501 HAPLN4Q86UW8 402 aa12.34□□□□□ -0.43
SMG6-215ENST00000574501 CARFQ8N187 725 aa12.34□□□□□ -0.43
SMG6-215ENST00000574501 RPP25LQ8N5L8 163 aaKnown RBP12.34□□□□□ -0.43
SMG6-215ENST00000574501 OR51H1Q8NH63 302 aa12.34□□□□□ -0.43
SMG6-215ENST00000574501 OR1L3Q8NH93 324 aa12.34□□□□□ -0.43
SMG6-215ENST00000574501 ZCCHC14Q8WYQ9 949 aaKnown RBP12.34□□□□□ -0.43
SMG6-215ENST00000574501 C10orf35Q96D05 121 aa12.34□□□□□ -0.43
SMG6-215ENST00000574501 ZNF837Q96EG3 531 aaPredicted RBP12.34□□□□□ -0.43
SMG6-215ENST00000574501 MRGPRX4Q96LA9 322 aa12.34□□□□□ -0.43
SMG6-215ENST00000574501 IGFLR1Q9H665 355 aa12.34□□□□□ -0.43
SMG6-215ENST00000574501 IL23AQ9NPF7 189 aa12.34□□□□□ -0.43
SMG6-215ENST00000574501 PLSCR2Q9NRY7 297 aa12.34□□□□□ -0.43
SMG6-215ENST00000574501 A0A0U1RQK1 487 aa12.33□□□□□ -0.43
SMG6-215ENST00000574501 ZNF320A2RRD8 509 aa12.33□□□□□ -0.43
SMG6-215ENST00000574501 TLX3O43711 291 aaPredicted RBP12.33□□□□□ -0.43
SMG6-215ENST00000574501 NRASP01111 189 aa12.33□□□□□ -0.43
SMG6-215ENST00000574501 IL3RAP26951 378 aa12.33□□□□□ -0.43
SMG6-215ENST00000574501 ARL6IP6Q8N6S5 226 aa12.33□□□□□ -0.43
SMG6-215ENST00000574501 OR1K1Q8NGR3 316 aa12.33□□□□□ -0.43
SMG6-215ENST00000574501 SPTSSAQ969W0 71 aa12.33□□□□□ -0.43
SMG6-215ENST00000574501 NABP1Q96AH0 204 aa12.33□□□□□ -0.43
SMG6-215ENST00000574501 SLC25A22Q9H936 323 aa12.33□□□□□ -0.43
SMG6-215ENST00000574501 TCRBV21S2A2A0A5A6 115 aa12.33□□□□□ -0.44
SMG6-215ENST00000574501 SIAH2O43255 324 aa12.33□□□□□ -0.44
SMG6-215ENST00000574501 OTX1P32242 354 aaPredicted RBP12.33□□□□□ -0.44
SMG6-215ENST00000574501 SUMO3P55854 103 aaPredicted RBP12.33□□□□□ -0.44
SMG6-215ENST00000574501 DAZAP2Q15038 168 aaPredicted RBP12.33□□□□□ -0.44
SMG6-215ENST00000574501 ZNF385AQ96PM9 386 aaKnown RBP12.33□□□□□ -0.44
SMG6-215ENST00000574501 MIEN1Q9BRT3 115 aa12.33□□□□□ -0.44
SMG6-215ENST00000574501 OR2J1Q9GZK6 312 aa12.33□□□□□ -0.44
SMG6-215ENST00000574501 PSENENQ9NZ42 101 aa12.33□□□□□ -0.44
SMG6-215ENST00000574501 RNF150Q9ULK6 438 aa12.33□□□□□ -0.44
SMG6-215ENST00000574501 DOCK11Q5JSL3 2073 aa12.33□□□□□ -0.44
SMG6-215ENST00000574501 GRIFINA4D1Z8 144 aa12.32□□□□□ -0.44
SMG6-215ENST00000574501 KIAA1324LA8MWY0 1029 aaPredicted RBP12.32□□□□□ -0.44
SMG6-215ENST00000574501 PSMB3P49720 205 aa12.32□□□□□ -0.44
SMG6-215ENST00000574501 RBM11P57052 281 aaKnown RBP12.32□□□□□ -0.44
SMG6-215ENST00000574501 OR8B8Q15620 311 aa12.32□□□□□ -0.44
SMG6-215ENST00000574501 LRRC75BQ2VPJ9 315 aa12.32□□□□□ -0.44
SMG6-215ENST00000574501 Q6ZSR3 168 aa12.32□□□□□ -0.44
SMG6-215ENST00000574501 LHFPL2Q6ZUX7 228 aa12.32□□□□□ -0.44
SMG6-215ENST00000574501 OR5D13Q8NGL4 314 aa12.32□□□□□ -0.44
SMG6-215ENST00000574501 ANAPC16Q96DE5 110 aa12.32□□□□□ -0.44
SMG6-215ENST00000574501 OR4C12Q96R67 309 aa12.32□□□□□ -0.44
SMG6-215ENST00000574501 PSMG3Q9BT73 122 aaPredicted RBP12.32□□□□□ -0.44
SMG6-215ENST00000574501 FBRSQ9HAH7 460 aa12.32□□□□□ -0.44
SMG6-215ENST00000574501 MANBALQ9NQG1 85 aa12.32□□□□□ -0.44
SMG6-215ENST00000574501 COL5A1P20908 1838 aaPredicted RBP12.32□□□□□ -0.44
SMG6-215ENST00000574501 UBE2L5PA0A1B0GUS4 154 aa12.32□□□□□ -0.44
SMG6-215ENST00000574501 DUXBA0A1W2PPF3 345 aa12.32□□□□□ -0.44
SMG6-215ENST00000574501 PGLYRP1O75594 196 aaPredicted RBP12.32□□□□□ -0.44
SMG6-215ENST00000574501 PDGFBP01127 241 aaPredicted RBP12.32□□□□□ -0.44
SMG6-215ENST00000574501 TYMSP04818 313 aa12.32□□□□□ -0.44
SMG6-215ENST00000574501 PSG2P11465 335 aa12.32□□□□□ -0.44
SMG6-215ENST00000574501 SERF2P84101 59 aa12.32□□□□□ -0.44
SMG6-215ENST00000574501 FAM69BQ5VUD6 431 aa12.32□□□□□ -0.44
SMG6-215ENST00000574501 ASCL4Q6XD76 172 aa12.32□□□□□ -0.44
SMG6-215ENST00000574501 TCF23Q7RTU1 214 aa12.32□□□□□ -0.44
SMG6-215ENST00000574501 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.32□□□□□ -0.44
SMG6-215ENST00000574501 OR10G3Q8NGC4 313 aa12.32□□□□□ -0.44
SMG6-215ENST00000574501 EXTL1Q92935 676 aa12.32□□□□□ -0.44
SMG6-215ENST00000574501 PPIAL4AQ9Y536 164 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms