RNA–Protein interactions for RNA: ENST00000574226.5

TVP23B-206, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23B, Length 1,080 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-206ENST00000574226 ISYNA1Q9NPH2 558 aa13.16□□□□□ -0.3
TVP23B-206ENST00000574226 KCNIP1Q9NZI2 227 aa13.16□□□□□ -0.3
TVP23B-206ENST00000574226 BOLA1Q9Y3E2 137 aa13.16□□□□□ -0.3
TVP23B-206ENST00000574226 LRRC42Q9Y546 428 aa13.16□□□□□ -0.3
TVP23B-206ENST00000574226 NOTCH3Q9UM47 2321 aa13.15□□□□□ -0.3
TVP23B-206ENST00000574226 TRAV39A0A0B4J263 110 aa13.15□□□□□ -0.3
TVP23B-206ENST00000574226 HSD17B6O14756 317 aa13.15□□□□□ -0.3
TVP23B-206ENST00000574226 RGS10O43665 173 aa13.15□□□□□ -0.3
TVP23B-206ENST00000574226 PDCD6O75340 191 aa13.15□□□□□ -0.3
TVP23B-206ENST00000574226 SNRNP70P08621 437 aaKnown RBP13.15□□□□□ -0.3
TVP23B-206ENST00000574226 SRMP19623 302 aa13.15□□□□□ -0.3
TVP23B-206ENST00000574226 LOXL3P58215 753 aa13.15□□□□□ -0.3
TVP23B-206ENST00000574226 CD83Q01151 205 aa13.15□□□□□ -0.3
TVP23B-206ENST00000574226 EBI3Q14213 229 aa13.15□□□□□ -0.3
TVP23B-206ENST00000574226 HES1Q14469 280 aa13.15□□□□□ -0.3
TVP23B-206ENST00000574226 IRF3Q14653 427 aa13.15□□□□□ -0.3
TVP23B-206ENST00000574226 HSD17B12Q53GQ0 312 aa13.15□□□□□ -0.3
TVP23B-206ENST00000574226 RBM48Q5RL73 367 aaKnown RBP13.15□□□□□ -0.3
TVP23B-206ENST00000574226 C1orf100Q5SVJ3 147 aa13.15□□□□□ -0.3
TVP23B-206ENST00000574226 UTF1Q5T230 341 aa13.15□□□□□ -0.3
TVP23B-206ENST00000574226 CEACAM19Q7Z692 300 aa13.15□□□□□ -0.3
TVP23B-206ENST00000574226 DRAM1Q8N682 238 aa13.15□□□□□ -0.3
TVP23B-206ENST00000574226 TMEM104Q8NE00 496 aa13.15□□□□□ -0.3
TVP23B-206ENST00000574226 OR4X2Q8NGF9 303 aa13.15□□□□□ -0.3
TVP23B-206ENST00000574226 KCNG3Q8TAE7 436 aa13.15□□□□□ -0.3
TVP23B-206ENST00000574226 CCDC107Q8WV48 283 aa13.15□□□□□ -0.3
TVP23B-206ENST00000574226 NRG4Q8WWG1 115 aa13.15□□□□□ -0.3
TVP23B-206ENST00000574226 CITED2Q99967 270 aaPredicted RBP13.15□□□□□ -0.3
TVP23B-206ENST00000574226 TMED9Q9BVK6 235 aa13.15□□□□□ -0.3
TVP23B-206ENST00000574226 BANF2Q9H503 90 aa13.15□□□□□ -0.3
TVP23B-206ENST00000574226 GNG12Q9UBI6 72 aa13.15□□□□□ -0.3
TVP23B-206ENST00000574226 C12orf77C9JDV5 145 aa13.14□□□□□ -0.31
TVP23B-206ENST00000574226 ARL6IP5O75915 188 aa13.14□□□□□ -0.31
TVP23B-206ENST00000574226 BPNT1O95861 308 aa13.14□□□□□ -0.31
TVP23B-206ENST00000574226 IGHV3-7P01780 117 aa13.14□□□□□ -0.31
TVP23B-206ENST00000574226 AMY1AP04745 511 aa13.14□□□□□ -0.31
TVP23B-206ENST00000574226 AMY2AP04746 511 aa13.14□□□□□ -0.31
TVP23B-206ENST00000574226 UCHL1P09936 223 aa13.14□□□□□ -0.31
TVP23B-206ENST00000574226 TMEM11P17152 192 aa13.14□□□□□ -0.31
TVP23B-206ENST00000574226 TPBGQ13641 420 aa13.14□□□□□ -0.31
TVP23B-206ENST00000574226 NSUN5P1Q3KNT7 163 aa13.14□□□□□ -0.31
TVP23B-206ENST00000574226 R3HDM4Q96D70 268 aa13.14□□□□□ -0.31
TVP23B-206ENST00000574226 NEDD4LQ96PU5 975 aa13.14□□□□□ -0.31
TVP23B-206ENST00000574226 MBNL3Q9NUK0 354 aaKnown RBP13.14□□□□□ -0.31
TVP23B-206ENST00000574226 BLOC1S6Q9UL45 172 aa13.14□□□□□ -0.31
TVP23B-206ENST00000574226 IGHV1-3A0A0C4DH29 117 aa13.13□□□□□ -0.31
TVP23B-206ENST00000574226 CD37P11049 281 aa13.13□□□□□ -0.31
TVP23B-206ENST00000574226 ZNF137PP52743 207 aa13.13□□□□□ -0.31
TVP23B-206ENST00000574226 TMEM95Q3KNT9 176 aa13.13□□□□□ -0.31
TVP23B-206ENST00000574226 SLC25A48Q6ZT89 311 aaKnown RBP13.13□□□□□ -0.31
TVP23B-206ENST00000574226 PRSS48Q7RTY5 328 aa13.13□□□□□ -0.31
TVP23B-206ENST00000574226 LRRTM1Q86UE6 522 aa13.13□□□□□ -0.31
TVP23B-206ENST00000574226 IZUMO1Q8IYV9 350 aa13.13□□□□□ -0.31
TVP23B-206ENST00000574226 OR8H1Q8NGG4 311 aa13.13□□□□□ -0.31
TVP23B-206ENST00000574226 OR6M1Q8NGM8 313 aa13.13□□□□□ -0.31
TVP23B-206ENST00000574226 OR2T10Q8NGZ9 312 aa13.13□□□□□ -0.31
TVP23B-206ENST00000574226 TMEM59Q9BXS4 323 aa13.13□□□□□ -0.31
TVP23B-206ENST00000574226 TSSC4Q9Y5U2 329 aaPredicted RBP13.13□□□□□ -0.31
TVP23B-206ENST00000574226 TGP01266 2768 aa13.13□□□□□ -0.31
TVP23B-206ENST00000574226 ERICH4A6NGS2 130 aa13.12□□□□□ -0.31
TVP23B-206ENST00000574226 SLC22A1O15245 554 aa13.12□□□□□ -0.31
TVP23B-206ENST00000574226 RGS11O94810 467 aa13.12□□□□□ -0.31
TVP23B-206ENST00000574226 MPIG6BO95866 241 aa13.12□□□□□ -0.31
TVP23B-206ENST00000574226 IGKV1D-33P01593 117 aa13.12□□□□□ -0.31
TVP23B-206ENST00000574226 IGKV1-33P01594 117 aa13.12□□□□□ -0.31
TVP23B-206ENST00000574226 HBZP02008 142 aa13.12□□□□□ -0.31
TVP23B-206ENST00000574226 HTR2CP28335 458 aa13.12□□□□□ -0.31
TVP23B-206ENST00000574226 CD1BP29016 333 aa13.12□□□□□ -0.31
TVP23B-206ENST00000574226 RPS27AP62979 156 aaKnown RBP13.12□□□□□ -0.31
TVP23B-206ENST00000574226 HTD2P86397 168 aa13.12□□□□□ -0.31
TVP23B-206ENST00000574226 MLLT11Q13015 90 aaPredicted RBP13.12□□□□□ -0.31
TVP23B-206ENST00000574226 C9orf152Q5JTZ5 239 aa13.12□□□□□ -0.31
TVP23B-206ENST00000574226 LIPKQ5VXJ0 399 aa13.12□□□□□ -0.31
TVP23B-206ENST00000574226 SIGIRRQ6IA17 410 aa13.12□□□□□ -0.31
TVP23B-206ENST00000574226 MOB3BQ86TA1 216 aa13.12□□□□□ -0.31
TVP23B-206ENST00000574226 OR4K15Q8NH41 348 aa13.12□□□□□ -0.31
TVP23B-206ENST00000574226 CHPT1Q8WUD6 406 aa13.12□□□□□ -0.31
TVP23B-206ENST00000574226 RTN4IP1Q8WWV3 396 aaPredicted RBP13.12□□□□□ -0.31
TVP23B-206ENST00000574226 ST6GALNAC6Q969X2 333 aa13.12□□□□□ -0.31
TVP23B-206ENST00000574226 FAM46BQ96A09 425 aa13.12□□□□□ -0.31
TVP23B-206ENST00000574226 TAF9BQ9HBM6 251 aa13.12□□□□□ -0.31
TVP23B-206ENST00000574226 A0A1W2PPE3 182 aa13.11□□□□□ -0.31
TVP23B-206ENST00000574226 TCRBV4S1A1TA0A5B7 111 aa13.11□□□□□ -0.31
TVP23B-206ENST00000574226 ADARB2-AS1A8MUL3 147 aa13.11□□□□□ -0.31
TVP23B-206ENST00000574226 VSIG8P0DPA2 414 aa13.11□□□□□ -0.31
TVP23B-206ENST00000574226 CRHBPP24387 322 aa13.11□□□□□ -0.31
TVP23B-206ENST00000574226 PSMD7P51665 324 aa13.11□□□□□ -0.31
TVP23B-206ENST00000574226 GP2P55259 537 aaKnown RBP13.11□□□□□ -0.31
TVP23B-206ENST00000574226 LY6G6FQ5SQ64 297 aa13.11□□□□□ -0.31
TVP23B-206ENST00000574226 FAM27D1Q5T7N8 215 aa13.11□□□□□ -0.31
TVP23B-206ENST00000574226 TGIF2LXQ8IUE1 241 aa13.11□□□□□ -0.31
TVP23B-206ENST00000574226 COMMD1Q8N668 190 aa13.11□□□□□ -0.31
TVP23B-206ENST00000574226 C5orf56Q8N8D9 126 aa13.11□□□□□ -0.31
TVP23B-206ENST00000574226 TM2D1Q9BX74 207 aa13.11□□□□□ -0.31
TVP23B-206ENST00000574226 RIMS4Q9H426 269 aaPredicted RBP13.11□□□□□ -0.31
TVP23B-206ENST00000574226 OR2S2Q9NQN1 319 aa13.11□□□□□ -0.31
TVP23B-206ENST00000574226 JPT1Q9UK76 154 aa13.11□□□□□ -0.31
TVP23B-206ENST00000574226 UBE2QL1A1L167 161 aa13.1□□□□□ -0.31
TVP23B-206ENST00000574226 HSMCR30P0CW71 290 aa13.1□□□□□ -0.31
TVP23B-206ENST00000574226 PF4V1P10720 104 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms