RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 ACSM3Q53FZ2 586 aa13.81□□□□□ -0.2
SMG6-214ENST00000573827 R3HDM4Q96D70 268 aa13.81□□□□□ -0.2
SMG6-214ENST00000573827 SELENOIQ9C0D9 397 aa13.81□□□□□ -0.2
SMG6-214ENST00000573827 DUSP21Q9H596 190 aa13.81□□□□□ -0.2
SMG6-214ENST00000573827 IGHV3-43A0A0B4J1X8 118 aa13.8□□□□□ -0.2
SMG6-214ENST00000573827 IGHV1-3A0A0C4DH29 117 aa13.8□□□□□ -0.2
SMG6-214ENST00000573827 PTGES3LE9PB15 166 aa13.8□□□□□ -0.2
SMG6-214ENST00000573827 SDCBPO00560 298 aaPredicted RBP13.8□□□□□ -0.2
SMG6-214ENST00000573827 PEX14O75381 377 aa13.8□□□□□ -0.2
SMG6-214ENST00000573827 GLAP06280 429 aa13.8□□□□□ -0.2
SMG6-214ENST00000573827 IGHV3-43DP0DP04 118 aa13.8□□□□□ -0.2
SMG6-214ENST00000573827 RCC1P18754 421 aaPredicted RBP13.8□□□□□ -0.2
SMG6-214ENST00000573827 MAPK3P27361 379 aaPredicted RBP13.8□□□□□ -0.2
SMG6-214ENST00000573827 ZNF137PP52743 207 aa13.8□□□□□ -0.2
SMG6-214ENST00000573827 SPHARQ15513 63 aa13.8□□□□□ -0.2
SMG6-214ENST00000573827 C1orf100Q5SVJ3 147 aa13.8□□□□□ -0.2
SMG6-214ENST00000573827 SYT6Q5T7P8 510 aaPredicted RBP13.8□□□□□ -0.2
SMG6-214ENST00000573827 C5orf24Q7Z6I8 188 aa13.8□□□□□ -0.2
SMG6-214ENST00000573827 IZUMO1Q8IYV9 350 aa13.8□□□□□ -0.2
SMG6-214ENST00000573827 MS4A15Q8N5U1 240 aa13.8□□□□□ -0.2
SMG6-214ENST00000573827 OR4F17Q8NGA8 305 aa13.8□□□□□ -0.2
SMG6-214ENST00000573827 OR10X1Q8NGY0 326 aa13.8□□□□□ -0.2
SMG6-214ENST00000573827 OR1L1Q8NH94 360 aa13.8□□□□□ -0.2
SMG6-214ENST00000573827 PHYHIPQ92561 330 aa13.8□□□□□ -0.2
SMG6-214ENST00000573827 THRSPQ92748 146 aa13.8□□□□□ -0.2
SMG6-214ENST00000573827 MYDGFQ969H8 173 aa13.8□□□□□ -0.2
SMG6-214ENST00000573827 OR4F4Q96R69 305 aa13.8□□□□□ -0.2
SMG6-214ENST00000573827 MND1Q9BWT6 205 aa13.8□□□□□ -0.2
SMG6-214ENST00000573827 VCXQ9H320 206 aa13.8□□□□□ -0.2
SMG6-214ENST00000573827 MBNL3Q9NUK0 354 aaKnown RBP13.8□□□□□ -0.2
SMG6-214ENST00000573827 ETAA1Q9NY74 926 aa13.8□□□□□ -0.2
SMG6-214ENST00000573827 PEX16Q9Y5Y5 336 aa13.8□□□□□ -0.2
SMG6-214ENST00000573827 COL7A1Q02388 2944 aa13.79□□□□□ -0.2
SMG6-214ENST00000573827 MCRIP1C9JLW8 97 aa13.79□□□□□ -0.2
SMG6-214ENST00000573827 CCRL2O00421 344 aa13.79□□□□□ -0.2
SMG6-214ENST00000573827 FGF16O43320 207 aa13.79□□□□□ -0.2
SMG6-214ENST00000573827 CA11O75493 328 aa13.79□□□□□ -0.2
SMG6-214ENST00000573827 IGKV1D-33P01593 117 aa13.79□□□□□ -0.2
SMG6-214ENST00000573827 IGKV1-33P01594 117 aa13.79□□□□□ -0.2
SMG6-214ENST00000573827 HBZP02008 142 aa13.79□□□□□ -0.2
SMG6-214ENST00000573827 FUT3P21217 361 aa13.79□□□□□ -0.2
SMG6-214ENST00000573827 REG1BP48304 166 aa13.79□□□□□ -0.2
SMG6-214ENST00000573827 QRFPP83859 136 aa13.79□□□□□ -0.2
SMG6-214ENST00000573827 GABPB1Q06547 395 aaPredicted RBP13.79□□□□□ -0.2
SMG6-214ENST00000573827 OXLD1Q5BKU9 147 aa13.79□□□□□ -0.2
SMG6-214ENST00000573827 ARSJQ5FYB0 599 aaPredicted RBP13.79□□□□□ -0.2
SMG6-214ENST00000573827 CT45A1Q5HYN5 189 aa13.79□□□□□ -0.2
SMG6-214ENST00000573827 Q6ZPA2 131 aa13.79□□□□□ -0.2
SMG6-214ENST00000573827 SLC25A48Q6ZT89 311 aaKnown RBP13.79□□□□□ -0.2
SMG6-214ENST00000573827 OR4K15Q8NH41 348 aa13.79□□□□□ -0.2
SMG6-214ENST00000573827 CT45A3Q8NHU0 189 aa13.79□□□□□ -0.2
SMG6-214ENST00000573827 MRPL30Q8TCC3 161 aaKnown RBP13.79□□□□□ -0.2
SMG6-214ENST00000573827 NEK7Q8TDX7 302 aa13.79□□□□□ -0.2
SMG6-214ENST00000573827 GFI1Q99684 422 aa13.79□□□□□ -0.2
SMG6-214ENST00000573827 PLSCR3Q9NRY6 295 aa13.79□□□□□ -0.2
SMG6-214ENST00000573827 GHRLQ9UBU3 117 aa13.79□□□□□ -0.2
SMG6-214ENST00000573827 H0YHG0 523 aa13.78□□□□□ -0.2
SMG6-214ENST00000573827 PDCD6O75340 191 aa13.78□□□□□ -0.2
SMG6-214ENST00000573827 CRTAPO75718 401 aaPredicted RBP13.78□□□□□ -0.2
SMG6-214ENST00000573827 GAPDHP04406 335 aaKnown RBP13.78□□□□□ -0.2
SMG6-214ENST00000573827 UCHL1P09936 223 aa13.78□□□□□ -0.2
SMG6-214ENST00000573827 VSIG8P0DPA2 414 aa13.78□□□□□ -0.2
SMG6-214ENST00000573827 TMEM11P17152 192 aa13.78□□□□□ -0.2
SMG6-214ENST00000573827 MYF6P23409 242 aa13.78□□□□□ -0.2
SMG6-214ENST00000573827 UNC119Q13432 240 aa13.78□□□□□ -0.2
SMG6-214ENST00000573827 GPR50Q13585 617 aa13.78□□□□□ -0.2
SMG6-214ENST00000573827 HNF4GQ14541 408 aa13.78□□□□□ -0.2
SMG6-214ENST00000573827 OR10K2Q6IF99 312 aa13.78□□□□□ -0.2
SMG6-214ENST00000573827 TMEM91Q6ZNR0 172 aa13.78□□□□□ -0.2
SMG6-214ENST00000573827 CENPVQ7Z7K6 275 aaPredicted RBP13.78□□□□□ -0.2
SMG6-214ENST00000573827 RTN4IP1Q8WWV3 396 aaPredicted RBP13.78□□□□□ -0.2
SMG6-214ENST00000573827 FAM46BQ96A09 425 aa13.78□□□□□ -0.2
SMG6-214ENST00000573827 RBMXL1Q96E39 390 aaKnown RBP13.78□□□□□ -0.2
SMG6-214ENST00000573827 EAF1Q96JC9 268 aaPredicted RBP13.78□□□□□ -0.2
SMG6-214ENST00000573827 TMED9Q9BVK6 235 aa13.78□□□□□ -0.2
SMG6-214ENST00000573827 ANKRD60Q9BZ19 345 aa13.78□□□□□ -0.2
SMG6-214ENST00000573827 IGHV3-72A0A0B4J1Y9 119 aa13.77□□□□□ -0.21
SMG6-214ENST00000573827 A0A1W2PRX2 142 aa13.77□□□□□ -0.21
SMG6-214ENST00000573827 LINC01548A6NM66 108 aa13.77□□□□□ -0.21
SMG6-214ENST00000573827 ZNF736B4DX44 427 aaPredicted RBP13.77□□□□□ -0.21
SMG6-214ENST00000573827 SLC22A1O15245 554 aa13.77□□□□□ -0.21
SMG6-214ENST00000573827 IGHG2P01859 326 aa13.77□□□□□ -0.21
SMG6-214ENST00000573827 CHATP28329 748 aa13.77□□□□□ -0.21
SMG6-214ENST00000573827 TPBGQ13641 420 aa13.77□□□□□ -0.21
SMG6-214ENST00000573827 TMEM30BQ3MIR4 351 aa13.77□□□□□ -0.21
SMG6-214ENST00000573827 NOL4LQ96MY1 436 aaPredicted RBP13.77□□□□□ -0.21
SMG6-214ENST00000573827 SULT4A1Q9BR01 284 aa13.77□□□□□ -0.21
SMG6-214ENST00000573827 KCNK15Q9H427 330 aa13.77□□□□□ -0.21
SMG6-214ENST00000573827 TRAPPC2LQ9UL33 140 aa13.77□□□□□ -0.21
SMG6-214ENST00000573827 TSSC4Q9Y5U2 329 aaPredicted RBP13.77□□□□□ -0.21
SMG6-214ENST00000573827 A0A0A6YYD4 124 aa13.76□□□□□ -0.21
SMG6-214ENST00000573827 TCRBV4S1A1TA0A5B7 111 aa13.76□□□□□ -0.21
SMG6-214ENST00000573827 UBE2QL1A1L167 161 aa13.76□□□□□ -0.21
SMG6-214ENST00000573827 PRB2P02812 416 aaPredicted RBP13.76□□□□□ -0.21
SMG6-214ENST00000573827 UBBP0CG47 229 aa13.76□□□□□ -0.21
SMG6-214ENST00000573827 SRMP19623 302 aa13.76□□□□□ -0.21
SMG6-214ENST00000573827 RPS27AP62979 156 aaKnown RBP13.76□□□□□ -0.21
SMG6-214ENST00000573827 C9orf152Q5JTZ5 239 aa13.76□□□□□ -0.21
SMG6-214ENST00000573827 C6orf183Q5T699 404 aa13.76□□□□□ -0.21
SMG6-214ENST00000573827 LIPKQ5VXJ0 399 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms