RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 SIGLEC5O15389 551 aa8.6□□□□□ -1.03
SMG6-213ENST00000573166 MED6O75586 246 aa8.6□□□□□ -1.03
SMG6-213ENST00000573166 WISP2O76076 250 aa8.6□□□□□ -1.03
SMG6-213ENST00000573166 KHDC1LQ5JSQ8 128 aa8.6□□□□□ -1.03
SMG6-213ENST00000573166 TCTE3Q8IZS6 198 aa8.6□□□□□ -1.03
SMG6-213ENST00000573166 ZNF714Q96N38 554 aa8.6□□□□□ -1.03
SMG6-213ENST00000573166 AMMECR1Q9Y4X0 333 aaPredicted RBP8.6□□□□□ -1.03
SMG6-213ENST00000573166 ODAMA1E959 279 aa8.6□□□□□ -1.03
SMG6-213ENST00000573166 TSPAN15O95858 294 aa8.6□□□□□ -1.03
SMG6-213ENST00000573166 HPXP02790 462 aa8.6□□□□□ -1.03
SMG6-213ENST00000573166 TPT1P13693 172 aaKnown RBP8.6□□□□□ -1.03
SMG6-213ENST00000573166 FAM168AQ92567 244 aa8.6□□□□□ -1.03
SMG6-213ENST00000573166 MARVELD1Q9BSK0 173 aa8.6□□□□□ -1.03
SMG6-213ENST00000573166 SLC25A31Q9H0C2 315 aa8.6□□□□□ -1.03
SMG6-213ENST00000573166 SHARPINQ9H0F6 387 aa8.6□□□□□ -1.03
SMG6-213ENST00000573166 KCNK7Q9Y2U2 307 aa8.6□□□□□ -1.03
SMG6-213ENST00000573166 COL4A2P08572 1712 aa8.6□□□□□ -1.03
SMG6-213ENST00000573166 FAM90A10PA6NDY2 464 aa8.59□□□□□ -1.03
SMG6-213ENST00000573166 FAM90A18PA6NE21 464 aa8.59□□□□□ -1.03
SMG6-213ENST00000573166 FAM90A16PA6NEW6 464 aa8.59□□□□□ -1.03
SMG6-213ENST00000573166 FAM90A20PA6NIJ5 464 aa8.59□□□□□ -1.03
SMG6-213ENST00000573166 FAM90A8PA6NJQ4 464 aa8.59□□□□□ -1.03
SMG6-213ENST00000573166 FAM90A7PA6NKC0 464 aa8.59□□□□□ -1.03
SMG6-213ENST00000573166 FAM90A22PA8MWA6 464 aa8.59□□□□□ -1.03
SMG6-213ENST00000573166 FAM90A12PA8MX19 464 aa8.59□□□□□ -1.03
SMG6-213ENST00000573166 FAM90A5PA8MXJ8 464 aa8.59□□□□□ -1.03
SMG6-213ENST00000573166 FAM90A23PA8MXZ1 464 aa8.59□□□□□ -1.03
SMG6-213ENST00000573166 LYNX1G3V0Z9 82 aa8.59□□□□□ -1.03
SMG6-213ENST00000573166 FAM90A15PP0C7V4 464 aa8.59□□□□□ -1.03
SMG6-213ENST00000573166 FAM90A13PP0C7W8 464 aa8.59□□□□□ -1.03
SMG6-213ENST00000573166 FAM90A14PP0C7W9 464 aa8.59□□□□□ -1.03
SMG6-213ENST00000573166 FAM90A24PP0C7X0 464 aa8.59□□□□□ -1.03
SMG6-213ENST00000573166 LYNX1P0DP58 116 aa8.59□□□□□ -1.03
SMG6-213ENST00000573166 FPR2P25090 351 aa8.59□□□□□ -1.03
SMG6-213ENST00000573166 NKX2-1P43699 371 aaPredicted RBP8.59□□□□□ -1.03
SMG6-213ENST00000573166 RPS4Y2Q8TD47 263 aa8.59□□□□□ -1.03
SMG6-213ENST00000573166 NEIL1Q96FI4 390 aaPredicted RBP8.59□□□□□ -1.03
SMG6-213ENST00000573166 Q96M66 194 aa8.59□□□□□ -1.03
SMG6-213ENST00000573166 PNRC2Q9NPJ4 139 aaKnown RBP8.59□□□□□ -1.03
SMG6-213ENST00000573166 A0A1W2PPE3 182 aa8.59□□□□□ -1.03
SMG6-213ENST00000573166 ANKRD20A5PA0PJZ0 165 aa8.59□□□□□ -1.03
SMG6-213ENST00000573166 ST8SIA5O15466 376 aa8.59□□□□□ -1.03
SMG6-213ENST00000573166 TPPPO94811 219 aa8.59□□□□□ -1.03
SMG6-213ENST00000573166 IGKV3-15P01624 115 aa8.59□□□□□ -1.03
SMG6-213ENST00000573166 ADH4P08319 380 aa8.59□□□□□ -1.03
SMG6-213ENST00000573166 PPP1CCP36873 323 aaKnown RBP8.59□□□□□ -1.03
SMG6-213ENST00000573166 CAMLGP49069 296 aa8.59□□□□□ -1.03
SMG6-213ENST00000573166 ARF6P62330 175 aa8.59□□□□□ -1.03
SMG6-213ENST00000573166 STUMQ69YW2 141 aa8.59□□□□□ -1.03
SMG6-213ENST00000573166 TEX261Q6UWH6 196 aa8.59□□□□□ -1.03
SMG6-213ENST00000573166 FOXL2NBQ6ZUU3 175 aa8.59□□□□□ -1.03
SMG6-213ENST00000573166 RELL2Q8NC24 303 aaPredicted RBP8.59□□□□□ -1.03
SMG6-213ENST00000573166 OR11H4Q8NGC9 324 aa8.59□□□□□ -1.03
SMG6-213ENST00000573166 OR13D1Q8NGV5 346 aa8.59□□□□□ -1.03
SMG6-213ENST00000573166 SLC25A38Q96DW6 304 aa8.59□□□□□ -1.03
SMG6-213ENST00000573166 SUCNR1Q9BXA5 334 aa8.59□□□□□ -1.03
SMG6-213ENST00000573166 GSX2Q9BZM3 304 aa8.59□□□□□ -1.03
SMG6-213ENST00000573166 U3KQ87 197 aa8.59□□□□□ -1.03
SMG6-213ENST00000573166 TMEM14DPA8MWL7 114 aa8.59□□□□□ -1.03
SMG6-213ENST00000573166 K7EPK0 472 aa8.59□□□□□ -1.03
SMG6-213ENST00000573166 FCGR3AP08637 254 aa8.59□□□□□ -1.03
SMG6-213ENST00000573166 RCC1P18754 421 aaPredicted RBP8.59□□□□□ -1.03
SMG6-213ENST00000573166 AADACP22760 399 aa8.59□□□□□ -1.03
SMG6-213ENST00000573166 S100A12P80511 92 aa8.59□□□□□ -1.03
SMG6-213ENST00000573166 NR2C2APQ86WQ0 139 aa8.59□□□□□ -1.03
SMG6-213ENST00000573166 FAM71E2Q8N5Q1 922 aa8.59□□□□□ -1.03
SMG6-213ENST00000573166 Q8NA96 180 aa8.59□□□□□ -1.03
SMG6-213ENST00000573166 OR10Z1Q8NGY1 313 aa8.59□□□□□ -1.03
SMG6-213ENST00000573166 PLSCR2Q9NRY7 297 aa8.59□□□□□ -1.03
SMG6-213ENST00000573166 MTCH1Q9NZJ7 389 aa8.59□□□□□ -1.03
SMG6-213ENST00000573166 ABCA1O95477 2261 aa8.59□□□□□ -1.03
SMG6-213ENST00000573166 PCNX3Q9H6A9 2034 aa8.59□□□□□ -1.03
SMG6-213ENST00000573166 C5orf63A6NC05 138 aa8.59□□□□□ -1.04
SMG6-213ENST00000573166 CTDSPLO15194 276 aa8.59□□□□□ -1.04
SMG6-213ENST00000573166 NDUFB6O95139 128 aa8.59□□□□□ -1.04
SMG6-213ENST00000573166 PPYP01298 95 aa8.59□□□□□ -1.04
SMG6-213ENST00000573166 OR4A4PQ8NGN8 299 aa8.59□□□□□ -1.04
SMG6-213ENST00000573166 OR13C8Q8NGS7 320 aa8.59□□□□□ -1.04
SMG6-213ENST00000573166 MSI2Q96DH6 328 aaKnown RBP8.59□□□□□ -1.04
SMG6-213ENST00000573166 XIRP2A4UGR9 3374 aa8.58□□□□□ -1.04
SMG6-213ENST00000573166 IGKV1-9A0A0C4DH69 117 aa8.58□□□□□ -1.04
SMG6-213ENST00000573166 LEUTXA8MZ59 168 aa8.58□□□□□ -1.04
SMG6-213ENST00000573166 GPR37O15354 613 aa8.58□□□□□ -1.04
SMG6-213ENST00000573166 ST8SIA3O43173 380 aa8.58□□□□□ -1.04
SMG6-213ENST00000573166 HLA-DQB1P01920 261 aa8.58□□□□□ -1.04
SMG6-213ENST00000573166 CCL1P22362 96 aa8.58□□□□□ -1.04
SMG6-213ENST00000573166 GLIPR1P48060 266 aa8.58□□□□□ -1.04
SMG6-213ENST00000573166 AKR1C1Q04828 323 aa8.58□□□□□ -1.04
SMG6-213ENST00000573166 VMA21Q3ZAQ7 101 aa8.58□□□□□ -1.04
SMG6-213ENST00000573166 ACP7Q6ZNF0 438 aa8.58□□□□□ -1.04
SMG6-213ENST00000573166 TGIF2LYQ8IUE0 185 aa8.58□□□□□ -1.04
SMG6-213ENST00000573166 TGIF2LXQ8IUE1 241 aa8.58□□□□□ -1.04
SMG6-213ENST00000573166 PRORYQ9H606 182 aa8.58□□□□□ -1.04
SMG6-213ENST00000573166 TNFRSF19Q9NS68 423 aa8.58□□□□□ -1.04
SMG6-213ENST00000573166 NAV2Q8IVL1 2488 aa8.58□□□□□ -1.04
SMG6-213ENST00000573166 PPIAL4CA0A0B4J2A2 164 aa8.58□□□□□ -1.04
SMG6-213ENST00000573166 A0A0D9SG52 128 aa8.58□□□□□ -1.04
SMG6-213ENST00000573166 HRASP01112 189 aa8.58□□□□□ -1.04
SMG6-213ENST00000573166 HBZP02008 142 aa8.58□□□□□ -1.04
SMG6-213ENST00000573166 PPIAL4GP0DN37 164 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms