RNA–Protein interactions for RNA: ENST00000572603.1

RAB40B-207, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-207ENST00000572603 HACD4Q5VWC8 232 aa17.98■□□□□ 0.47
RAB40B-207ENST00000572603 BCL6BQ8N143 479 aaPredicted RBP17.98■□□□□ 0.47
RAB40B-207ENST00000572603 DTX3Q8N9I9 347 aa17.98■□□□□ 0.47
RAB40B-207ENST00000572603 OR10A7Q8NGE5 316 aa17.98■□□□□ 0.47
RAB40B-207ENST00000572603 OR1L1Q8NH94 360 aa17.98■□□□□ 0.47
RAB40B-207ENST00000572603 NUDCD2Q8WVJ2 157 aa17.98■□□□□ 0.47
RAB40B-207ENST00000572603 S100A16Q96FQ6 103 aaKnown RBP17.98■□□□□ 0.47
RAB40B-207ENST00000572603 DCUN1D5Q9BTE7 237 aa17.98■□□□□ 0.47
RAB40B-207ENST00000572603 SUCNR1Q9BXA5 334 aa17.98■□□□□ 0.47
RAB40B-207ENST00000572603 AUNIPQ9H7T9 357 aa17.98■□□□□ 0.47
RAB40B-207ENST00000572603 TAF9BQ9HBM6 251 aa17.98■□□□□ 0.47
RAB40B-207ENST00000572603 ZNF286AQ9HBT8 521 aa17.98■□□□□ 0.47
RAB40B-207ENST00000572603 Q9N2K0 584 aa17.98■□□□□ 0.47
RAB40B-207ENST00000572603 IGHV2-26A0A0B4J1V2 119 aa17.97■□□□□ 0.47
RAB40B-207ENST00000572603 A0A1W2PRD5 423 aa17.97■□□□□ 0.47
RAB40B-207ENST00000572603 A0A1W2PRF3 423 aa17.97■□□□□ 0.47
RAB40B-207ENST00000572603 A0A1W2PRM7 423 aa17.97■□□□□ 0.47
RAB40B-207ENST00000572603 FAM172BPA6NC97 362 aa17.97■□□□□ 0.47
RAB40B-207ENST00000572603 POM121CA8CG34 1229 aa17.97■□□□□ 0.47
RAB40B-207ENST00000572603 CTDSP2O14595 271 aa17.97■□□□□ 0.47
RAB40B-207ENST00000572603 MELTFP08582 738 aa17.97■□□□□ 0.47
RAB40B-207ENST00000572603 TAS2R20P59543 309 aa17.97■□□□□ 0.47
RAB40B-207ENST00000572603 HLA-DRB3P79483 266 aa17.97■□□□□ 0.47
RAB40B-207ENST00000572603 PNLIPRP3Q17RR3 467 aa17.97■□□□□ 0.47
RAB40B-207ENST00000572603 FAM53AQ6NSI3 398 aaPredicted RBP17.97■□□□□ 0.47
RAB40B-207ENST00000572603 LAX1Q8IWV1 398 aa17.97■□□□□ 0.47
RAB40B-207ENST00000572603 OR11H6Q8NGC7 330 aa17.97■□□□□ 0.47
RAB40B-207ENST00000572603 PHF21AQ96BD5 680 aa17.97■□□□□ 0.47
RAB40B-207ENST00000572603 DGCR14Q96DF8 476 aaKnown RBP17.97■□□□□ 0.47
RAB40B-207ENST00000572603 HEXA-AS1Q9H8Q6 139 aa17.97■□□□□ 0.47
RAB40B-207ENST00000572603 DIABLOQ9NR28 239 aa17.97■□□□□ 0.47
RAB40B-207ENST00000572603 A6NHS1 94 aa17.96■□□□□ 0.47
RAB40B-207ENST00000572603 NPFFO15130 113 aa17.96■□□□□ 0.47
RAB40B-207ENST00000572603 PTHLHP12272 177 aa17.96■□□□□ 0.47
RAB40B-207ENST00000572603 FPR2P25090 351 aa17.96■□□□□ 0.47
RAB40B-207ENST00000572603 LOXL3P58215 753 aa17.96■□□□□ 0.47
RAB40B-207ENST00000572603 ARFRP1Q13795 201 aa17.96■□□□□ 0.47
RAB40B-207ENST00000572603 LTC4SQ16873 150 aa17.96■□□□□ 0.47
RAB40B-207ENST00000572603 ZNF626Q68DY1 528 aa17.96■□□□□ 0.47
RAB40B-207ENST00000572603 OR52W1Q6IF63 320 aa17.96■□□□□ 0.47
RAB40B-207ENST00000572603 OR13D1Q8NGV5 346 aa17.96■□□□□ 0.47
RAB40B-207ENST00000572603 SETD6Q8TBK2 473 aa17.96■□□□□ 0.47
RAB40B-207ENST00000572603 C22orf15Q8WYQ4 148 aa17.96■□□□□ 0.47
RAB40B-207ENST00000572603 BPIFB3P59826 476 aa17.95■□□□□ 0.46
RAB40B-207ENST00000572603 TMEM69Q5SWH9 247 aa17.95■□□□□ 0.46
RAB40B-207ENST00000572603 OR52M1Q8NGK5 317 aa17.95■□□□□ 0.46
RAB40B-207ENST00000572603 AJUBAQ96IF1 538 aa17.95■□□□□ 0.46
RAB40B-207ENST00000572603 GFOD1Q9NXC2 390 aa17.95■□□□□ 0.46
RAB40B-207ENST00000572603 KCNIP1Q9NZI2 227 aa17.95■□□□□ 0.46
RAB40B-207ENST00000572603 JMJD1CQ15652 2540 aa17.95■□□□□ 0.46
RAB40B-207ENST00000572603 SPINT2O43291 252 aa17.94■□□□□ 0.46
RAB40B-207ENST00000572603 DTYMKP23919 212 aa17.94■□□□□ 0.46
RAB40B-207ENST00000572603 NFYBP25208 207 aa17.94■□□□□ 0.46
RAB40B-207ENST00000572603 SAA4P35542 130 aa17.94■□□□□ 0.46
RAB40B-207ENST00000572603 TMEM30BQ3MIR4 351 aa17.94■□□□□ 0.46
RAB40B-207ENST00000572603 LDLRAD2Q5SZI1 272 aa17.94■□□□□ 0.46
RAB40B-207ENST00000572603 PRR18Q8N4B5 295 aa17.94■□□□□ 0.46
RAB40B-207ENST00000572603 MCFD2Q8NI22 146 aa17.94■□□□□ 0.46
RAB40B-207ENST00000572603 MAFIPQ8WZ33 124 aa17.94■□□□□ 0.46
RAB40B-207ENST00000572603 GCDHQ92947 438 aaPredicted RBP17.94■□□□□ 0.46
RAB40B-207ENST00000572603 LEAP2Q969E1 77 aa17.94■□□□□ 0.46
RAB40B-207ENST00000572603 ZNF48Q96MX3 618 aaPredicted RBP17.94■□□□□ 0.46
RAB40B-207ENST00000572603 SLC6A7Q99884 636 aa17.94■□□□□ 0.46
RAB40B-207ENST00000572603 CLEC7AQ9BXN2 247 aa17.94■□□□□ 0.46
RAB40B-207ENST00000572603 ZNF230Q9UIE0 474 aaPredicted RBP17.94■□□□□ 0.46
RAB40B-207ENST00000572603 IGKV1D-8A0A087WSZ0 117 aa17.93■□□□□ 0.46
RAB40B-207ENST00000572603 IGHV3-43A0A0B4J1X8 118 aa17.93■□□□□ 0.46
RAB40B-207ENST00000572603 A0A0U1RQK1 487 aa17.93■□□□□ 0.46
RAB40B-207ENST00000572603 SDCBPO00560 298 aaPredicted RBP17.93■□□□□ 0.46
RAB40B-207ENST00000572603 IGLV1-47P01700 117 aa17.93■□□□□ 0.46
RAB40B-207ENST00000572603 HLA-DQB1P01920 261 aa17.93■□□□□ 0.46
RAB40B-207ENST00000572603 IGHV3-43DP0DP04 118 aa17.93■□□□□ 0.46
RAB40B-207ENST00000572603 MNDAP41218 407 aa17.93■□□□□ 0.46
RAB40B-207ENST00000572603 GNG2P59768 71 aa17.93■□□□□ 0.46
RAB40B-207ENST00000572603 MRPS15P82914 257 aaKnown RBP17.93■□□□□ 0.46
RAB40B-207ENST00000572603 GNMTQ14749 295 aa17.93■□□□□ 0.46
RAB40B-207ENST00000572603 MIDNQ504T8 468 aa17.93■□□□□ 0.46
RAB40B-207ENST00000572603 Q6ZS49 121 aa17.93■□□□□ 0.46
RAB40B-207ENST00000572603 ABHD12Q8N2K0 398 aa17.93■□□□□ 0.46
RAB40B-207ENST00000572603 OR4P4Q8NGL7 312 aa17.93■□□□□ 0.46
RAB40B-207ENST00000572603 C17orf50Q8WW18 174 aa17.93■□□□□ 0.46
RAB40B-207ENST00000572603 C6orf62Q9GZU0 229 aaPredicted RBP17.93■□□□□ 0.46
RAB40B-207ENST00000572603 MS4A7Q9GZW8 240 aaPredicted RBP17.93■□□□□ 0.46
RAB40B-207ENST00000572603 RAB9BQ9NP90 201 aa17.93■□□□□ 0.46
RAB40B-207ENST00000572603 ZNRD1Q9P1U0 126 aa17.93■□□□□ 0.46
RAB40B-207ENST00000572603 MGAT4AQ9UM21 535 aa17.93■□□□□ 0.46
RAB40B-207ENST00000572603 IGKV1-6A0A0C4DH72 117 aa17.92■□□□□ 0.46
RAB40B-207ENST00000572603 MDFIC2A0A1B0GVS7 189 aa17.92■□□□□ 0.46
RAB40B-207ENST00000572603 FAM25AB3EWG3 89 aa17.92■□□□□ 0.46
RAB40B-207ENST00000572603 FAM25CB3EWG5 89 aa17.92■□□□□ 0.46
RAB40B-207ENST00000572603 FAM25GB3EWG6 89 aa17.92■□□□□ 0.46
RAB40B-207ENST00000572603 SCTP09683 121 aa17.92■□□□□ 0.46
RAB40B-207ENST00000572603 HTD2P86397 168 aa17.92■□□□□ 0.46
RAB40B-207ENST00000572603 PITPNAQ00169 270 aa17.92■□□□□ 0.46
RAB40B-207ENST00000572603 MADCAM1Q13477 382 aa17.92■□□□□ 0.46
RAB40B-207ENST00000572603 SRSF7Q16629 238 aaKnown RBP eCLIP17.92■□□□□ 0.46
RAB40B-207ENST00000572603 EXTL2Q9UBQ6 330 aa17.92■□□□□ 0.46
RAB40B-207ENST00000572603 TRDCB7Z8K6 153 aa17.91■□□□□ 0.46
RAB40B-207ENST00000572603 RGS5O15539 181 aa17.91■□□□□ 0.46
RAB40B-207ENST00000572603 IGHV3-7P01780 117 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms