RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 INSL4Q14641 139 aa14.26□□□□□ -0.13
CHD3-214ENST00000572579 CT45A1Q5HYN5 189 aa14.26□□□□□ -0.13
CHD3-214ENST00000572579 DHRSXQ8N5I4 330 aa14.26□□□□□ -0.13
CHD3-214ENST00000572579 OR4K15Q8NH41 348 aa14.26□□□□□ -0.13
CHD3-214ENST00000572579 OR1L1Q8NH94 360 aa14.26□□□□□ -0.13
CHD3-214ENST00000572579 CT45A3Q8NHU0 189 aa14.26□□□□□ -0.13
CHD3-214ENST00000572579 RTN4IP1Q8WWV3 396 aaPredicted RBP14.26□□□□□ -0.13
CHD3-214ENST00000572579 PAK1IP1Q9NWT1 392 aaPredicted RBP14.26□□□□□ -0.13
CHD3-214ENST00000572579 PSORS1C1Q9UIG5 152 aa14.26□□□□□ -0.13
CHD3-214ENST00000572579 MRPS28Q9Y2Q9 187 aaKnown RBP14.26□□□□□ -0.13
CHD3-214ENST00000572579 AIPO00170 330 aa14.25□□□□□ -0.13
CHD3-214ENST00000572579 ZNF780AO75290 641 aaPredicted RBP14.25□□□□□ -0.13
CHD3-214ENST00000572579 MAS1P04201 325 aa14.25□□□□□ -0.13
CHD3-214ENST00000572579 RCC1P18754 421 aaPredicted RBP14.25□□□□□ -0.13
CHD3-214ENST00000572579 THBS3P49746 956 aa14.25□□□□□ -0.13
CHD3-214ENST00000572579 SLC35A2P78381 396 aa14.25□□□□□ -0.13
CHD3-214ENST00000572579 EGFEM1PQ0D2K5 195 aa14.25□□□□□ -0.13
CHD3-214ENST00000572579 SYT6Q5T7P8 510 aaPredicted RBP14.25□□□□□ -0.13
CHD3-214ENST00000572579 C8orf86Q6ZUL3 223 aa14.25□□□□□ -0.13
CHD3-214ENST00000572579 IZUMO1Q8IYV9 350 aa14.25□□□□□ -0.13
CHD3-214ENST00000572579 JAGN1Q8N5M9 183 aa14.25□□□□□ -0.13
CHD3-214ENST00000572579 RCC1LQ96I51 464 aaKnown RBP14.25□□□□□ -0.13
CHD3-214ENST00000572579 FKBP14Q9NWM8 211 aa14.25□□□□□ -0.13
CHD3-214ENST00000572579 COL7A1Q02388 2944 aa14.25□□□□□ -0.13
CHD3-214ENST00000572579 SERPINE3A8MV23 424 aa14.24□□□□□ -0.13
CHD3-214ENST00000572579 GPR12P47775 334 aa14.24□□□□□ -0.13
CHD3-214ENST00000572579 F2RL1P55085 397 aa14.24□□□□□ -0.13
CHD3-214ENST00000572579 RCN1Q15293 331 aa14.24□□□□□ -0.13
CHD3-214ENST00000572579 RAB12Q6IQ22 244 aa14.24□□□□□ -0.13
CHD3-214ENST00000572579 LCNL1Q6ZST4 164 aa14.24□□□□□ -0.13
CHD3-214ENST00000572579 SLC25A48Q6ZT89 311 aaKnown RBP14.24□□□□□ -0.13
CHD3-214ENST00000572579 SLC35E3Q7Z769 313 aa14.24□□□□□ -0.13
CHD3-214ENST00000572579 STPG2Q8N412 459 aa14.24□□□□□ -0.13
CHD3-214ENST00000572579 PACRGLQ8N7B6 248 aa14.24□□□□□ -0.13
CHD3-214ENST00000572579 OR10V1Q8NGI7 309 aa14.24□□□□□ -0.13
CHD3-214ENST00000572579 CHPT1Q8WUD6 406 aa14.24□□□□□ -0.13
CHD3-214ENST00000572579 DUX3Q96PT4 197 aa14.24□□□□□ -0.13
CHD3-214ENST00000572579 P2RX4Q99571 388 aa14.24□□□□□ -0.13
CHD3-214ENST00000572579 S100A13Q99584 98 aa14.24□□□□□ -0.13
CHD3-214ENST00000572579 ABCG5Q9H222 651 aa14.24□□□□□ -0.13
CHD3-214ENST00000572579 ETAA1Q9NY74 926 aa14.24□□□□□ -0.13
CHD3-214ENST00000572579 PEX16Q9Y5Y5 336 aa14.24□□□□□ -0.13
CHD3-214ENST00000572579 SC5DO75845 299 aa14.23□□□□□ -0.13
CHD3-214ENST00000572579 HBZP02008 142 aa14.23□□□□□ -0.13
CHD3-214ENST00000572579 CELP19835 753 aa14.23□□□□□ -0.13
CHD3-214ENST00000572579 CAPGP40121 348 aa14.23□□□□□ -0.13
CHD3-214ENST00000572579 ZNF137PP52743 207 aa14.23□□□□□ -0.13
CHD3-214ENST00000572579 FAM27D1Q5T7N8 215 aa14.23□□□□□ -0.13
CHD3-214ENST00000572579 TGIF2LXQ8IUE1 241 aa14.23□□□□□ -0.13
CHD3-214ENST00000572579 NANOGP1Q8N7R0 232 aa14.23□□□□□ -0.13
CHD3-214ENST00000572579 NEK7Q8TDX7 302 aa14.23□□□□□ -0.13
CHD3-214ENST00000572579 MRPS24Q96EL2 167 aaKnown RBP14.23□□□□□ -0.13
CHD3-214ENST00000572579 RITA1Q96K30 269 aa14.23□□□□□ -0.13
CHD3-214ENST00000572579 Q96M66 194 aa14.23□□□□□ -0.13
CHD3-214ENST00000572579 HSPB9Q9BQS6 159 aa14.23□□□□□ -0.13
CHD3-214ENST00000572579 SELENOIQ9C0D9 397 aa14.23□□□□□ -0.13
CHD3-214ENST00000572579 PLCXD1Q9NUJ7 323 aa14.23□□□□□ -0.13
CHD3-214ENST00000572579 CHCHD3Q9NX63 227 aaKnown RBP14.23□□□□□ -0.13
CHD3-214ENST00000572579 CNOT2Q9NZN8 540 aaKnown RBP14.23□□□□□ -0.13
CHD3-214ENST00000572579 EFCAB10A6NFE3 127 aa14.22□□□□□ -0.13
CHD3-214ENST00000572579 NCBP2LA6PVI3 153 aaKnown RBP14.22□□□□□ -0.13
CHD3-214ENST00000572579 MCRIP1C9JLW8 97 aa14.22□□□□□ -0.13
CHD3-214ENST00000572579 CD1AP06126 327 aa14.22□□□□□ -0.13
CHD3-214ENST00000572579 MGMTP16455 207 aa14.22□□□□□ -0.13
CHD3-214ENST00000572579 CD1BP29016 333 aa14.22□□□□□ -0.13
CHD3-214ENST00000572579 GPR176Q14439 515 aa14.22□□□□□ -0.13
CHD3-214ENST00000572579 GNMTQ14749 295 aa14.22□□□□□ -0.13
CHD3-214ENST00000572579 OGFRL1Q5TC84 451 aaPredicted RBP14.22□□□□□ -0.13
CHD3-214ENST00000572579 UNQ9370/PRO34162Q6UXP9 181 aa14.22□□□□□ -0.13
CHD3-214ENST00000572579 AHSA2Q719I0 299 aa14.22□□□□□ -0.13
CHD3-214ENST00000572579 CDH26Q8IXH8 852 aa14.22□□□□□ -0.13
CHD3-214ENST00000572579 SETD9Q8NE22 299 aa14.22□□□□□ -0.13
CHD3-214ENST00000572579 S1PR3Q99500 378 aa14.22□□□□□ -0.13
CHD3-214ENST00000572579 CKLFQ9UBR5 152 aa14.22□□□□□ -0.13
CHD3-214ENST00000572579 TRAPPC2LQ9UL33 140 aa14.22□□□□□ -0.13
CHD3-214ENST00000572579 UBE2QL1A1L167 161 aa14.21□□□□□ -0.13
CHD3-214ENST00000572579 RPLP1P05386 114 aaKnown RBP14.21□□□□□ -0.13
CHD3-214ENST00000572579 CFHR3Q02985 330 aa14.21□□□□□ -0.13
CHD3-214ENST00000572579 Q3ZCU0 254 aa14.21□□□□□ -0.13
CHD3-214ENST00000572579 C6orf141Q5SZD1 244 aa14.21□□□□□ -0.13
CHD3-214ENST00000572579 AWAT2Q6E213 333 aa14.21□□□□□ -0.13
CHD3-214ENST00000572579 OR10K2Q6IF99 312 aa14.21□□□□□ -0.13
CHD3-214ENST00000572579 LRRTM1Q86UE6 522 aa14.21□□□□□ -0.13
CHD3-214ENST00000572579 ODF3L1Q8IXM7 274 aa14.21□□□□□ -0.13
CHD3-214ENST00000572579 PRR18Q8N4B5 295 aa14.21□□□□□ -0.13
CHD3-214ENST00000572579 FAM71E2Q8N5Q1 922 aa14.21□□□□□ -0.13
CHD3-214ENST00000572579 BPIFB6Q8NFQ5 453 aa14.21□□□□□ -0.13
CHD3-214ENST00000572579 OR52L2PQ8NGH6 319 aa14.21□□□□□ -0.13
CHD3-214ENST00000572579 OR2T10Q8NGZ9 312 aa14.21□□□□□ -0.13
CHD3-214ENST00000572579 MRPL30Q8TCC3 161 aaKnown RBP14.21□□□□□ -0.13
CHD3-214ENST00000572579 FAM46BQ96A09 425 aa14.21□□□□□ -0.13
CHD3-214ENST00000572579 RAX2Q96IS3 184 aa14.21□□□□□ -0.13
CHD3-214ENST00000572579 SPACA1Q9HBV2 294 aa14.21□□□□□ -0.13
CHD3-214ENST00000572579 ZFP57Q9NU63 452 aa14.21□□□□□ -0.13
CHD3-214ENST00000572579 MBNL3Q9NUK0 354 aaKnown RBP14.21□□□□□ -0.13
CHD3-214ENST00000572579 LIN7CQ9NUP9 197 aaKnown RBP14.21□□□□□ -0.13
CHD3-214ENST00000572579 CASQ2O14958 399 aaPredicted RBP14.2□□□□□ -0.14
CHD3-214ENST00000572579 MOSP00540 346 aa14.2□□□□□ -0.14
CHD3-214ENST00000572579 FUT3P21217 361 aa14.2□□□□□ -0.14
CHD3-214ENST00000572579 WNT4P56705 351 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms