RNA–Protein interactions for RNA: ENST00000571806.1

TSR1-202, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-202ENST00000571806 OR52I1Q8NGK6 324 aa12.19□□□□□ -0.46
TSR1-202ENST00000571806 C4orf3Q8WVX3 66 aa12.19□□□□□ -0.46
TSR1-202ENST00000571806 MRPS24Q96EL2 167 aaKnown RBP12.19□□□□□ -0.46
TSR1-202ENST00000571806 DUX3Q96PT4 197 aa12.19□□□□□ -0.46
TSR1-202ENST00000571806 PLSCR3Q9NRY6 295 aa12.19□□□□□ -0.46
TSR1-202ENST00000571806 TRAV39A0A0B4J263 110 aa12.18□□□□□ -0.46
TSR1-202ENST00000571806 AIPO00170 330 aa12.18□□□□□ -0.46
TSR1-202ENST00000571806 MT-ND4P03905 459 aa12.18□□□□□ -0.46
TSR1-202ENST00000571806 SERPINA2P20848 420 aa12.18□□□□□ -0.46
TSR1-202ENST00000571806 BDKRB2P30411 391 aa12.18□□□□□ -0.46
TSR1-202ENST00000571806 ATAD3CQ5T2N8 411 aa12.18□□□□□ -0.46
TSR1-202ENST00000571806 C6orf183Q5T699 404 aa12.18□□□□□ -0.46
TSR1-202ENST00000571806 TRAT1Q6PIZ9 186 aa12.18□□□□□ -0.46
TSR1-202ENST00000571806 TMPRSS11AQ6ZMR5 421 aa12.18□□□□□ -0.46
TSR1-202ENST00000571806 SLC25A48Q6ZT89 311 aaKnown RBP12.18□□□□□ -0.46
TSR1-202ENST00000571806 FAM71E2Q8N5Q1 922 aa12.18□□□□□ -0.46
TSR1-202ENST00000571806 NEK7Q8TDX7 302 aa12.18□□□□□ -0.46
TSR1-202ENST00000571806 C9orf16Q9BUW7 83 aa12.18□□□□□ -0.46
TSR1-202ENST00000571806 AMBNQ9NP70 447 aa12.18□□□□□ -0.46
TSR1-202ENST00000571806 FAM53CQ9NYF3 392 aa12.18□□□□□ -0.46
TSR1-202ENST00000571806 CKLFQ9UBR5 152 aa12.18□□□□□ -0.46
TSR1-202ENST00000571806 AASSQ9UDR5 926 aa12.18□□□□□ -0.46
TSR1-202ENST00000571806 LOC100130705A0A1B0GUX0 176 aa12.17□□□□□ -0.46
TSR1-202ENST00000571806 SEC14L6B5MCN3 397 aa12.17□□□□□ -0.46
TSR1-202ENST00000571806 MCRIP1C9JLW8 97 aa12.17□□□□□ -0.46
TSR1-202ENST00000571806 CA11O75493 328 aa12.17□□□□□ -0.46
TSR1-202ENST00000571806 LIMS3P0CW19 117 aa12.17□□□□□ -0.46
TSR1-202ENST00000571806 LIMS4P0CW20 117 aa12.17□□□□□ -0.46
TSR1-202ENST00000571806 DCKP27707 260 aa12.17□□□□□ -0.46
TSR1-202ENST00000571806 PSMB8P28062 276 aa12.17□□□□□ -0.46
TSR1-202ENST00000571806 GTF2A1P52655 376 aaPredicted RBP12.17□□□□□ -0.46
TSR1-202ENST00000571806 CFHR3Q02985 330 aa12.17□□□□□ -0.46
TSR1-202ENST00000571806 CCDC107Q8WV48 283 aa12.17□□□□□ -0.46
TSR1-202ENST00000571806 RGP1Q92546 391 aaPredicted RBP12.17□□□□□ -0.46
TSR1-202ENST00000571806 FGF20Q9NP95 211 aaPredicted RBP12.17□□□□□ -0.46
TSR1-202ENST00000571806 GNG12Q9UBI6 72 aa12.17□□□□□ -0.46
TSR1-202ENST00000571806 TRAPPC2LQ9UL33 140 aa12.17□□□□□ -0.46
TSR1-202ENST00000571806 IRGMA1A4Y4 181 aa12.16□□□□□ -0.46
TSR1-202ENST00000571806 C3orf84H3BNL1 204 aa12.16□□□□□ -0.46
TSR1-202ENST00000571806 GPX5O75715 221 aa12.16□□□□□ -0.46
TSR1-202ENST00000571806 ECI1P42126 302 aa12.16□□□□□ -0.46
TSR1-202ENST00000571806 LUMP51884 338 aaPredicted RBP12.16□□□□□ -0.46
TSR1-202ENST00000571806 RIPK1Q13546 671 aa12.16□□□□□ -0.46
TSR1-202ENST00000571806 FHL3Q13643 280 aa12.16□□□□□ -0.46
TSR1-202ENST00000571806 DEFB136Q30KP8 78 aa12.16□□□□□ -0.46
TSR1-202ENST00000571806 SLC22A6Q4U2R8 563 aa12.16□□□□□ -0.46
TSR1-202ENST00000571806 TMEM65Q6PI78 240 aa12.16□□□□□ -0.46
TSR1-202ENST00000571806 SCOCQ9UIL1 159 aa12.16□□□□□ -0.46
TSR1-202ENST00000571806 DNAH9Q9NYC9 4486 aa12.16□□□□□ -0.46
TSR1-202ENST00000571806 H3BNX3 289 aa12.15□□□□□ -0.46
TSR1-202ENST00000571806 OGG1O15527 345 aa12.15□□□□□ -0.46
TSR1-202ENST00000571806 LANCL1O43813 399 aa12.15□□□□□ -0.46
TSR1-202ENST00000571806 GLAP06280 429 aa12.15□□□□□ -0.46
TSR1-202ENST00000571806 OR8U8P0C7N1 319 aa12.15□□□□□ -0.46
TSR1-202ENST00000571806 CHATP28329 748 aa12.15□□□□□ -0.46
TSR1-202ENST00000571806 F2RL1P55085 397 aa12.15□□□□□ -0.46
TSR1-202ENST00000571806 SYT6Q5T7P8 510 aaPredicted RBP12.15□□□□□ -0.46
TSR1-202ENST00000571806 ZNF554Q86TJ5 538 aa12.15□□□□□ -0.46
TSR1-202ENST00000571806 CDH26Q8IXH8 852 aa12.15□□□□□ -0.46
TSR1-202ENST00000571806 ZNF439Q8NDP4 499 aa12.15□□□□□ -0.46
TSR1-202ENST00000571806 OR11H1Q8NG94 326 aa12.15□□□□□ -0.46
TSR1-202ENST00000571806 SMIM19Q96E16 107 aa12.15□□□□□ -0.46
TSR1-202ENST00000571806 UBE2E2Q96LR5 201 aa12.15□□□□□ -0.46
TSR1-202ENST00000571806 KCTD7Q96MP8 289 aa12.15□□□□□ -0.46
TSR1-202ENST00000571806 ZNF184Q99676 751 aaPredicted RBP12.15□□□□□ -0.46
TSR1-202ENST00000571806 BABAM2Q9NXR7 383 aa12.15□□□□□ -0.46
TSR1-202ENST00000571806 ZNF581Q9P0T4 197 aa12.15□□□□□ -0.46
TSR1-202ENST00000571806 RCC2Q9P258 522 aaKnown RBP12.15□□□□□ -0.46
TSR1-202ENST00000571806 ZNF107Q9UII5 783 aaPredicted RBP12.15□□□□□ -0.46
TSR1-202ENST00000571806 ZNF256Q9Y2P7 627 aaPredicted RBP12.15□□□□□ -0.46
TSR1-202ENST00000571806 IGHV3-43A0A0B4J1X8 118 aa12.14□□□□□ -0.47
TSR1-202ENST00000571806 FAM90A10PA6NDY2 464 aa12.14□□□□□ -0.47
TSR1-202ENST00000571806 FAM90A7PA6NKC0 464 aa12.14□□□□□ -0.47
TSR1-202ENST00000571806 FAM90A23PA8MXZ1 464 aa12.14□□□□□ -0.47
TSR1-202ENST00000571806 C12orf77C9JDV5 145 aa12.14□□□□□ -0.47
TSR1-202ENST00000571806 IGHV3-43DP0DP04 118 aa12.14□□□□□ -0.47
TSR1-202ENST00000571806 IGFBP3P17936 291 aaPredicted RBP12.14□□□□□ -0.47
TSR1-202ENST00000571806 RUNX1Q01196 453 aa12.14□□□□□ -0.47
TSR1-202ENST00000571806 MED21Q13503 144 aa12.14□□□□□ -0.47
TSR1-202ENST00000571806 ZNF260Q3ZCT1 412 aa12.14□□□□□ -0.47
TSR1-202ENST00000571806 CT45A1Q5HYN5 189 aa12.14□□□□□ -0.47
TSR1-202ENST00000571806 GAPTQ8N292 157 aa12.14□□□□□ -0.47
TSR1-202ENST00000571806 CT45A3Q8NHU0 189 aa12.14□□□□□ -0.47
TSR1-202ENST00000571806 MYOZ3Q8TDC0 251 aa12.14□□□□□ -0.47
TSR1-202ENST00000571806 PRR25Q96S07 402 aa12.14□□□□□ -0.47
TSR1-202ENST00000571806 HSPB9Q9BQS6 159 aa12.14□□□□□ -0.47
TSR1-202ENST00000571806 ETAA1Q9NY74 926 aa12.14□□□□□ -0.47
TSR1-202ENST00000571806 ZNF736B4DX44 427 aaPredicted RBP12.13□□□□□ -0.47
TSR1-202ENST00000571806 SC5DO75845 299 aa12.13□□□□□ -0.47
TSR1-202ENST00000571806 HBZP02008 142 aa12.13□□□□□ -0.47
TSR1-202ENST00000571806 MYL12AP19105 171 aa12.13□□□□□ -0.47
TSR1-202ENST00000571806 VHLP40337 213 aa12.13□□□□□ -0.47
TSR1-202ENST00000571806 ETV1P50549 477 aa12.13□□□□□ -0.47
TSR1-202ENST00000571806 ZNF134P52741 427 aa12.13□□□□□ -0.47
TSR1-202ENST00000571806 MMDQ15546 238 aa12.13□□□□□ -0.47
TSR1-202ENST00000571806 Q499Y3 187 aa12.13□□□□□ -0.47
TSR1-202ENST00000571806 YIF1BQ5BJH7 314 aa12.13□□□□□ -0.47
TSR1-202ENST00000571806 NKAPLQ5M9Q1 402 aa12.13□□□□□ -0.47
TSR1-202ENST00000571806 XAF1Q6GPH4 301 aa12.13□□□□□ -0.47
TSR1-202ENST00000571806 RAB12Q6IQ22 244 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms