RNA–Protein interactions for RNA: ENST00000571058.5

RPA1-203, Transcript of replication protein A1, humanhuman

TSL 4

Gene RPA1, Length 577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-203ENST00000571058 GFOD1Q9NXC2 390 aa13.78□□□□□ -0.2
RPA1-203ENST00000571058 HSD17B6O14756 317 aa13.77□□□□□ -0.21
RPA1-203ENST00000571058 PDCD6O75340 191 aa13.77□□□□□ -0.21
RPA1-203ENST00000571058 IGHV3-7P01780 117 aa13.77□□□□□ -0.21
RPA1-203ENST00000571058 LPLP06858 475 aa13.77□□□□□ -0.21
RPA1-203ENST00000571058 UCHL1P09936 223 aa13.77□□□□□ -0.21
RPA1-203ENST00000571058 CD28P10747 220 aa13.77□□□□□ -0.21
RPA1-203ENST00000571058 SRMP19623 302 aa13.77□□□□□ -0.21
RPA1-203ENST00000571058 RANBP1P43487 201 aa13.77□□□□□ -0.21
RPA1-203ENST00000571058 LOXL3P58215 753 aa13.77□□□□□ -0.21
RPA1-203ENST00000571058 TPBGQ13641 420 aa13.77□□□□□ -0.21
RPA1-203ENST00000571058 STEAP3Q658P3 488 aa13.77□□□□□ -0.21
RPA1-203ENST00000571058 PRSS48Q7RTY5 328 aa13.77□□□□□ -0.21
RPA1-203ENST00000571058 CEACAM19Q7Z692 300 aa13.77□□□□□ -0.21
RPA1-203ENST00000571058 LRRTM1Q86UE6 522 aa13.77□□□□□ -0.21
RPA1-203ENST00000571058 DRAM1Q8N682 238 aa13.77□□□□□ -0.21
RPA1-203ENST00000571058 OR56B4Q8NH76 319 aa13.77□□□□□ -0.21
RPA1-203ENST00000571058 KCNG3Q8TAE7 436 aa13.77□□□□□ -0.21
RPA1-203ENST00000571058 CMYA5Q8N3K9 4069 aa13.77□□□□□ -0.21
RPA1-203ENST00000571058 C12orf77C9JDV5 145 aa13.76□□□□□ -0.21
RPA1-203ENST00000571058 CCRL2O00421 344 aa13.76□□□□□ -0.21
RPA1-203ENST00000571058 FGF16O43320 207 aa13.76□□□□□ -0.21
RPA1-203ENST00000571058 AMY1AP04745 511 aa13.76□□□□□ -0.21
RPA1-203ENST00000571058 AMY2AP04746 511 aa13.76□□□□□ -0.21
RPA1-203ENST00000571058 SNRNP70P08621 437 aaKnown RBP13.76□□□□□ -0.21
RPA1-203ENST00000571058 CRHBPP24387 322 aa13.76□□□□□ -0.21
RPA1-203ENST00000571058 HES1Q14469 280 aa13.76□□□□□ -0.21
RPA1-203ENST00000571058 PDLIM3Q53GG5 364 aaPredicted RBP13.76□□□□□ -0.21
RPA1-203ENST00000571058 LIPKQ5VXJ0 399 aa13.76□□□□□ -0.21
RPA1-203ENST00000571058 CENPVQ7Z7K6 275 aaPredicted RBP13.76□□□□□ -0.21
RPA1-203ENST00000571058 OR5AU1Q8NGC0 362 aa13.76□□□□□ -0.21
RPA1-203ENST00000571058 NEDD4LQ96PU5 975 aa13.76□□□□□ -0.21
RPA1-203ENST00000571058 CITED2Q99967 270 aaPredicted RBP13.76□□□□□ -0.21
RPA1-203ENST00000571058 KCNIP1Q9NZI2 227 aa13.76□□□□□ -0.21
RPA1-203ENST00000571058 GNG12Q9UBI6 72 aa13.76□□□□□ -0.21
RPA1-203ENST00000571058 BLOC1S6Q9UL45 172 aa13.76□□□□□ -0.21
RPA1-203ENST00000571058 LRRC42Q9Y546 428 aa13.76□□□□□ -0.21
RPA1-203ENST00000571058 TXNL1O43396 289 aa13.75□□□□□ -0.21
RPA1-203ENST00000571058 KCNAB3O43448 404 aa13.75□□□□□ -0.21
RPA1-203ENST00000571058 ARL6IP5O75915 188 aa13.75□□□□□ -0.21
RPA1-203ENST00000571058 BPNT1O95861 308 aa13.75□□□□□ -0.21
RPA1-203ENST00000571058 MPIG6BO95866 241 aa13.75□□□□□ -0.21
RPA1-203ENST00000571058 CD37P11049 281 aa13.75□□□□□ -0.21
RPA1-203ENST00000571058 TMEM11P17152 192 aa13.75□□□□□ -0.21
RPA1-203ENST00000571058 HTR2CP28335 458 aa13.75□□□□□ -0.21
RPA1-203ENST00000571058 GP2P55259 537 aaKnown RBP13.75□□□□□ -0.21
RPA1-203ENST00000571058 CD83Q01151 205 aa13.75□□□□□ -0.21
RPA1-203ENST00000571058 MLLT11Q13015 90 aaPredicted RBP13.75□□□□□ -0.21
RPA1-203ENST00000571058 INSL4Q14641 139 aa13.75□□□□□ -0.21
RPA1-203ENST00000571058 NSUN5P1Q3KNT7 163 aa13.75□□□□□ -0.21
RPA1-203ENST00000571058 TMEM95Q3KNT9 176 aa13.75□□□□□ -0.21
RPA1-203ENST00000571058 FAM27D1Q5T7N8 215 aa13.75□□□□□ -0.21
RPA1-203ENST00000571058 SIGIRRQ6IA17 410 aa13.75□□□□□ -0.21
RPA1-203ENST00000571058 OR6M1Q8NGM8 313 aa13.75□□□□□ -0.21
RPA1-203ENST00000571058 OR4K15Q8NH41 348 aa13.75□□□□□ -0.21
RPA1-203ENST00000571058 FAM46BQ96A09 425 aa13.75□□□□□ -0.21
RPA1-203ENST00000571058 TMEM59Q9BXS4 323 aa13.75□□□□□ -0.21
RPA1-203ENST00000571058 MBNL3Q9NUK0 354 aaKnown RBP13.75□□□□□ -0.21
RPA1-203ENST00000571058 IGHV1-3A0A0C4DH29 117 aa13.74□□□□□ -0.21
RPA1-203ENST00000571058 A0A1W2PPE3 182 aa13.74□□□□□ -0.21
RPA1-203ENST00000571058 SLC22A1O15245 554 aa13.74□□□□□ -0.21
RPA1-203ENST00000571058 HBZP02008 142 aa13.74□□□□□ -0.21
RPA1-203ENST00000571058 HSMCR30P0CW71 290 aa13.74□□□□□ -0.21
RPA1-203ENST00000571058 VSIG8P0DPA2 414 aa13.74□□□□□ -0.21
RPA1-203ENST00000571058 CPEP16870 476 aa13.74□□□□□ -0.21
RPA1-203ENST00000571058 RPS27AP62979 156 aaKnown RBP13.74□□□□□ -0.21
RPA1-203ENST00000571058 EBI3Q14213 229 aa13.74□□□□□ -0.21
RPA1-203ENST00000571058 IZUMO2Q6UXV1 221 aa13.74□□□□□ -0.21
RPA1-203ENST00000571058 SLC25A48Q6ZT89 311 aaKnown RBP13.74□□□□□ -0.21
RPA1-203ENST00000571058 IZUMO1Q8IYV9 350 aa13.74□□□□□ -0.21
RPA1-203ENST00000571058 OR4X2Q8NGF9 303 aa13.74□□□□□ -0.21
RPA1-203ENST00000571058 SGCDQ92629 289 aa13.74□□□□□ -0.21
RPA1-203ENST00000571058 CCDC90BQ9GZT6 254 aa13.74□□□□□ -0.21
RPA1-203ENST00000571058 PLXNB1O43157 2135 aa13.73□□□□□ -0.21
RPA1-203ENST00000571058 UBE2QL1A1L167 161 aa13.73□□□□□ -0.21
RPA1-203ENST00000571058 IGKV1D-33P01593 117 aa13.73□□□□□ -0.21
RPA1-203ENST00000571058 IGKV1-33P01594 117 aa13.73□□□□□ -0.21
RPA1-203ENST00000571058 RCC1P18754 421 aaPredicted RBP13.73□□□□□ -0.21
RPA1-203ENST00000571058 ZNF137PP52743 207 aa13.73□□□□□ -0.21
RPA1-203ENST00000571058 DIAPH2-AS1Q14236 149 aa13.73□□□□□ -0.21
RPA1-203ENST00000571058 C9orf152Q5JTZ5 239 aa13.73□□□□□ -0.21
RPA1-203ENST00000571058 MOB3BQ86TA1 216 aa13.73□□□□□ -0.21
RPA1-203ENST00000571058 RTN4IP1Q8WWV3 396 aaPredicted RBP13.73□□□□□ -0.21
RPA1-203ENST00000571058 TMEM203Q969S6 136 aa13.73□□□□□ -0.21
RPA1-203ENST00000571058 ST6GALNAC6Q969X2 333 aa13.73□□□□□ -0.21
RPA1-203ENST00000571058 R3HDM4Q96D70 268 aa13.73□□□□□ -0.21
RPA1-203ENST00000571058 MGLLQ99685 303 aa13.73□□□□□ -0.21
RPA1-203ENST00000571058 TM2D1Q9BX74 207 aa13.73□□□□□ -0.21
RPA1-203ENST00000571058 TAF9BQ9HBM6 251 aa13.73□□□□□ -0.21
RPA1-203ENST00000571058 OR2S2Q9NQN1 319 aa13.73□□□□□ -0.21
RPA1-203ENST00000571058 IGHV3-43A0A0B4J1X8 118 aa13.72□□□□□ -0.21
RPA1-203ENST00000571058 ERICH4A6NGS2 130 aa13.72□□□□□ -0.21
RPA1-203ENST00000571058 ADARB2-AS1A8MUL3 147 aa13.72□□□□□ -0.21
RPA1-203ENST00000571058 RGS11O94810 467 aa13.72□□□□□ -0.21
RPA1-203ENST00000571058 IGHV3-43DP0DP04 118 aa13.72□□□□□ -0.21
RPA1-203ENST00000571058 CHATP28329 748 aa13.72□□□□□ -0.21
RPA1-203ENST00000571058 CD1BP29016 333 aa13.72□□□□□ -0.21
RPA1-203ENST00000571058 VHLP40337 213 aa13.72□□□□□ -0.21
RPA1-203ENST00000571058 PSMD7P51665 324 aa13.72□□□□□ -0.21
RPA1-203ENST00000571058 HTD2P86397 168 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms