RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 S1PR3Q99500 378 aa6.74□□□□□ -1.33
CTDNEP1-203ENST00000570385 RASL11BQ9BPW5 248 aa6.74□□□□□ -1.33
CTDNEP1-203ENST00000570385 TMEM138Q9NPI0 162 aa6.74□□□□□ -1.33
CTDNEP1-203ENST00000570385 LIN7CQ9NUP9 197 aaKnown RBP6.74□□□□□ -1.33
CTDNEP1-203ENST00000570385 GNG12Q9UBI6 72 aa6.74□□□□□ -1.33
CTDNEP1-203ENST00000570385 TRAPPC2LQ9UL33 140 aa6.74□□□□□ -1.33
CTDNEP1-203ENST00000570385 WSB1Q9Y6I7 421 aa6.74□□□□□ -1.33
CTDNEP1-203ENST00000570385 U3KQK5 164 aa6.74□□□□□ -1.33
CTDNEP1-203ENST00000570385 RYR3Q15413 4870 aa6.73□□□□□ -1.33
CTDNEP1-203ENST00000570385 C12orf77C9JDV5 145 aa6.73□□□□□ -1.33
CTDNEP1-203ENST00000570385 RAMP3O60896 148 aa6.73□□□□□ -1.33
CTDNEP1-203ENST00000570385 LY86O95711 162 aa6.73□□□□□ -1.33
CTDNEP1-203ENST00000570385 LALBAP00709 142 aa6.73□□□□□ -1.33
CTDNEP1-203ENST00000570385 VDAC1P21796 283 aa6.73□□□□□ -1.33
CTDNEP1-203ENST00000570385 IL3RAP26951 378 aa6.73□□□□□ -1.33
CTDNEP1-203ENST00000570385 SLC6A1P30531 599 aa6.73□□□□□ -1.33
CTDNEP1-203ENST00000570385 SOX6P35712 828 aa6.73□□□□□ -1.33
CTDNEP1-203ENST00000570385 VHLP40337 213 aa6.73□□□□□ -1.33
CTDNEP1-203ENST00000570385 PAX5Q02548 391 aa6.73□□□□□ -1.33
CTDNEP1-203ENST00000570385 FOXE3Q13461 319 aa6.73□□□□□ -1.33
CTDNEP1-203ENST00000570385 RIPK1Q13546 671 aa6.73□□□□□ -1.33
CTDNEP1-203ENST00000570385 KIR2DS1Q14954 304 aa6.73□□□□□ -1.33
CTDNEP1-203ENST00000570385 ZNF260Q3ZCT1 412 aa6.73□□□□□ -1.33
CTDNEP1-203ENST00000570385 KLHL22Q53GT1 634 aa6.73□□□□□ -1.33
CTDNEP1-203ENST00000570385 CT45A1Q5HYN5 189 aa6.73□□□□□ -1.33
CTDNEP1-203ENST00000570385 C9orf66Q5T8R8 295 aa6.73□□□□□ -1.33
CTDNEP1-203ENST00000570385 RPL22L1Q6P5R6 122 aaKnown RBP6.73□□□□□ -1.33
CTDNEP1-203ENST00000570385 ZNF497Q6ZNH5 498 aa6.73□□□□□ -1.33
CTDNEP1-203ENST00000570385 STX19Q8N4C7 294 aa6.73□□□□□ -1.33
CTDNEP1-203ENST00000570385 OR52M1Q8NGK5 317 aa6.73□□□□□ -1.33
CTDNEP1-203ENST00000570385 OR8U1Q8NH10 309 aa6.73□□□□□ -1.33
CTDNEP1-203ENST00000570385 CT45A3Q8NHU0 189 aa6.73□□□□□ -1.33
CTDNEP1-203ENST00000570385 MUL1Q969V5 352 aa6.73□□□□□ -1.33
CTDNEP1-203ENST00000570385 RITA1Q96K30 269 aa6.73□□□□□ -1.33
CTDNEP1-203ENST00000570385 KCTD7Q96MP8 289 aa6.73□□□□□ -1.33
CTDNEP1-203ENST00000570385 ZNF184Q99676 751 aaPredicted RBP6.73□□□□□ -1.33
CTDNEP1-203ENST00000570385 GON7Q9BXV9 100 aa6.73□□□□□ -1.33
CTDNEP1-203ENST00000570385 KLK15Q9H2R5 256 aa6.73□□□□□ -1.33
CTDNEP1-203ENST00000570385 BANF2Q9H503 90 aa6.73□□□□□ -1.33
CTDNEP1-203ENST00000570385 CLEC2DQ9UHP7 191 aa6.73□□□□□ -1.33
CTDNEP1-203ENST00000570385 SCOCQ9UIL1 159 aa6.73□□□□□ -1.33
CTDNEP1-203ENST00000570385 RPL36Q9Y3U8 105 aaKnown RBP6.73□□□□□ -1.33
CTDNEP1-203ENST00000570385 LSM4Q9Y4Z0 139 aaKnown RBP6.73□□□□□ -1.33
CTDNEP1-203ENST00000570385 TRAV8-7A0A075B6U6 113 aa6.72□□□□□ -1.33
CTDNEP1-203ENST00000570385 PNMA8CA0A1B0GUJ8 204 aa6.72□□□□□ -1.33
CTDNEP1-203ENST00000570385 UBE2QL1A1L167 161 aa6.72□□□□□ -1.33
CTDNEP1-203ENST00000570385 MCRIP1C9JLW8 97 aa6.72□□□□□ -1.33
CTDNEP1-203ENST00000570385 G3V318 75 aa6.72□□□□□ -1.33
CTDNEP1-203ENST00000570385 RRP9O43818 475 aaKnown RBP6.72□□□□□ -1.33
CTDNEP1-203ENST00000570385 ORC5O43913 435 aa6.72□□□□□ -1.33
CTDNEP1-203ENST00000570385 WBP4O75554 376 aaKnown RBP6.72□□□□□ -1.33
CTDNEP1-203ENST00000570385 HBZP02008 142 aa6.72□□□□□ -1.33
CTDNEP1-203ENST00000570385 ELANEP08246 267 aa6.72□□□□□ -1.33
CTDNEP1-203ENST00000570385 GTF2F2P13984 249 aa6.72□□□□□ -1.33
CTDNEP1-203ENST00000570385 RCC1P18754 421 aaPredicted RBP6.72□□□□□ -1.33
CTDNEP1-203ENST00000570385 CNTFRP26992 372 aa6.72□□□□□ -1.33
CTDNEP1-203ENST00000570385 CD1BP29016 333 aa6.72□□□□□ -1.33
CTDNEP1-203ENST00000570385 CDX1P47902 265 aaPredicted RBP6.72□□□□□ -1.33
CTDNEP1-203ENST00000570385 ADARB1P78563 741 aaKnown RBP6.72□□□□□ -1.33
CTDNEP1-203ENST00000570385 CFHR3Q02985 330 aa6.72□□□□□ -1.33
CTDNEP1-203ENST00000570385 DCTN2Q13561 401 aaKnown RBP6.72□□□□□ -1.33
CTDNEP1-203ENST00000570385 GNMTQ14749 295 aa6.72□□□□□ -1.33
CTDNEP1-203ENST00000570385 MPV17LQ2QL34 196 aa6.72□□□□□ -1.33
CTDNEP1-203ENST00000570385 NHLRC3Q5JS37 347 aa6.72□□□□□ -1.33
CTDNEP1-203ENST00000570385 RAB12Q6IQ22 244 aa6.72□□□□□ -1.33
CTDNEP1-203ENST00000570385 SLC25A48Q6ZT89 311 aaKnown RBP6.72□□□□□ -1.33
CTDNEP1-203ENST00000570385 JAGN1Q8N5M9 183 aa6.72□□□□□ -1.33
CTDNEP1-203ENST00000570385 FAM71E2Q8N5Q1 922 aa6.72□□□□□ -1.33
CTDNEP1-203ENST00000570385 LINC00311Q8N616 119 aa6.72□□□□□ -1.33
CTDNEP1-203ENST00000570385 ZNF439Q8NDP4 499 aa6.72□□□□□ -1.33
CTDNEP1-203ENST00000570385 OR11H1Q8NG94 326 aa6.72□□□□□ -1.33
CTDNEP1-203ENST00000570385 OR52L2PQ8NGH6 319 aa6.72□□□□□ -1.33
CTDNEP1-203ENST00000570385 C4orf3Q8WVX3 66 aa6.72□□□□□ -1.33
CTDNEP1-203ENST00000570385 GHSRQ92847 366 aa6.72□□□□□ -1.33
CTDNEP1-203ENST00000570385 C9orf16Q9BUW7 83 aa6.72□□□□□ -1.33
CTDNEP1-203ENST00000570385 IFT22Q9H7X7 185 aa6.72□□□□□ -1.33
CTDNEP1-203ENST00000570385 GNB4Q9HAV0 340 aa6.72□□□□□ -1.33
CTDNEP1-203ENST00000570385 FGF20Q9NP95 211 aaPredicted RBP6.72□□□□□ -1.33
CTDNEP1-203ENST00000570385 MRPS18AQ9NVS2 196 aaKnown RBP6.72□□□□□ -1.33
CTDNEP1-203ENST00000570385 PAK1IP1Q9NWT1 392 aaPredicted RBP6.72□□□□□ -1.33
CTDNEP1-203ENST00000570385 ETAA1Q9NY74 926 aa6.72□□□□□ -1.33
CTDNEP1-203ENST00000570385 IL36GQ9NZH8 169 aa6.72□□□□□ -1.33
CTDNEP1-203ENST00000570385 ZMAT5Q9UDW3 170 aaKnown RBP6.72□□□□□ -1.33
CTDNEP1-203ENST00000570385 ZNF107Q9UII5 783 aaPredicted RBP6.72□□□□□ -1.33
CTDNEP1-203ENST00000570385 MRPS28Q9Y2Q9 187 aaKnown RBP6.72□□□□□ -1.33
CTDNEP1-203ENST00000570385 PEX16Q9Y5Y5 336 aa6.72□□□□□ -1.33
CTDNEP1-203ENST00000570385 OGG1O15527 345 aa6.71□□□□□ -1.34
CTDNEP1-203ENST00000570385 SPINT2O43291 252 aa6.71□□□□□ -1.34
CTDNEP1-203ENST00000570385 BAG2O95816 211 aa6.71□□□□□ -1.34
CTDNEP1-203ENST00000570385 IGHG4P01861 327 aa6.71□□□□□ -1.34
CTDNEP1-203ENST00000570385 MAS1P04201 325 aa6.71□□□□□ -1.34
CTDNEP1-203ENST00000570385 NHLRC4P0CG21 123 aaPredicted RBP6.71□□□□□ -1.34
CTDNEP1-203ENST00000570385 IGFBP3P17936 291 aaPredicted RBP6.71□□□□□ -1.34
CTDNEP1-203ENST00000570385 PSMB8P28062 276 aa6.71□□□□□ -1.34
CTDNEP1-203ENST00000570385 GP2P55259 537 aaKnown RBP6.71□□□□□ -1.34
CTDNEP1-203ENST00000570385 MMDQ15546 238 aa6.71□□□□□ -1.34
CTDNEP1-203ENST00000570385 CCDC58Q4VC31 144 aa6.71□□□□□ -1.34
CTDNEP1-203ENST00000570385 AWAT2Q6E213 333 aa6.71□□□□□ -1.34
CTDNEP1-203ENST00000570385 ZFP1Q6P2D0 407 aa6.71□□□□□ -1.34
CTDNEP1-203ENST00000570385 GLIPR1L1Q6UWM5 242 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms