RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 LYL1P12980 280 aa7.49□□□□□ -1.21
LINC00558-201ENST00000569422 TMEM211Q6ICI0 200 aa7.49□□□□□ -1.21
LINC00558-201ENST00000569422 SPSB4Q96A44 273 aa7.49□□□□□ -1.21
LINC00558-201ENST00000569422 POM121L2Q96KW2 1035 aa7.49□□□□□ -1.21
LINC00558-201ENST00000569422 SSX3Q99909 188 aa7.49□□□□□ -1.21
LINC00558-201ENST00000569422 TMEM100Q9NV29 134 aa7.49□□□□□ -1.21
LINC00558-201ENST00000569422 MRPS18CQ9Y3D5 142 aaKnown RBP7.49□□□□□ -1.21
LINC00558-201ENST00000569422 POMT1Q9Y6A1 747 aa7.49□□□□□ -1.21
LINC00558-201ENST00000569422 SPTBN2O15020 2390 aa7.49□□□□□ -1.21
LINC00558-201ENST00000569422 PRR14LQ5THK1 2151 aa7.48□□□□□ -1.21
LINC00558-201ENST00000569422 TRBV23-1A0A0A0MS06 115 aa7.48□□□□□ -1.21
LINC00558-201ENST00000569422 C21orf140B9A014 251 aa7.48□□□□□ -1.21
LINC00558-201ENST00000569422 C9JQL5 133 aa7.48□□□□□ -1.21
LINC00558-201ENST00000569422 E5RGE8 158 aa7.48□□□□□ -1.21
LINC00558-201ENST00000569422 H3BP45 60 aa7.48□□□□□ -1.21
LINC00558-201ENST00000569422 SIRPB1O00241 398 aa7.48□□□□□ -1.21
LINC00558-201ENST00000569422 TCAPO15273 167 aa7.48□□□□□ -1.21
LINC00558-201ENST00000569422 ST8SIA3O43173 380 aa7.48□□□□□ -1.21
LINC00558-201ENST00000569422 JTBO76095 146 aa7.48□□□□□ -1.21
LINC00558-201ENST00000569422 CST7O76096 145 aa7.48□□□□□ -1.21
LINC00558-201ENST00000569422 NXPH2O95156 264 aa7.48□□□□□ -1.21
LINC00558-201ENST00000569422 CEBPGP53567 150 aa7.48□□□□□ -1.21
LINC00558-201ENST00000569422 EIF5AP63241 154 aaKnown RBP7.48□□□□□ -1.21
LINC00558-201ENST00000569422 GNMTQ14749 295 aa7.48□□□□□ -1.21
LINC00558-201ENST00000569422 HERPUD1Q15011 391 aa7.48□□□□□ -1.21
LINC00558-201ENST00000569422 CXorf66Q5JRM2 361 aaPredicted RBP7.48□□□□□ -1.21
LINC00558-201ENST00000569422 COLCA1Q6ZS62 124 aa7.48□□□□□ -1.21
LINC00558-201ENST00000569422 CNEP1R1Q8N9A8 125 aa7.48□□□□□ -1.21
LINC00558-201ENST00000569422 CCDC71LQ8N9Z2 235 aa7.48□□□□□ -1.21
LINC00558-201ENST00000569422 SUMF2Q8NBJ7 301 aa7.48□□□□□ -1.21
LINC00558-201ENST00000569422 RNASE11Q8TAA1 199 aaKnown RBP7.48□□□□□ -1.21
LINC00558-201ENST00000569422 AKR1E2Q96JD6 320 aa7.48□□□□□ -1.21
LINC00558-201ENST00000569422 C20orf24Q9BUV8 137 aa7.48□□□□□ -1.21
LINC00558-201ENST00000569422 EIF5A2Q9GZV4 153 aaKnown RBP7.48□□□□□ -1.21
LINC00558-201ENST00000569422 TUBD1Q9UJT1 453 aa7.48□□□□□ -1.21
LINC00558-201ENST00000569422 KLF13Q9Y2Y9 288 aaPredicted RBP7.48□□□□□ -1.21
LINC00558-201ENST00000569422 NSG2Q9Y328 171 aa7.48□□□□□ -1.21
LINC00558-201ENST00000569422 TRGV5A0A0B4J1U4 118 aa7.48□□□□□ -1.21
LINC00558-201ENST00000569422 SLC22A20A6NK97 555 aa7.48□□□□□ -1.21
LINC00558-201ENST00000569422 RNASEK-C17orf49H0YIS7 233 aa7.48□□□□□ -1.21
LINC00558-201ENST00000569422 NKX2-8O15522 239 aa7.48□□□□□ -1.21
LINC00558-201ENST00000569422 TSPAN15O95858 294 aa7.48□□□□□ -1.21
LINC00558-201ENST00000569422 IL18BPO95998 194 aa7.48□□□□□ -1.21
LINC00558-201ENST00000569422 GRPP07492 148 aa7.48□□□□□ -1.21
LINC00558-201ENST00000569422 SFTA3P0C7M3 94 aa7.48□□□□□ -1.21
LINC00558-201ENST00000569422 S100PP25815 95 aa7.48□□□□□ -1.21
LINC00558-201ENST00000569422 RPL35P42766 123 aaKnown RBP7.48□□□□□ -1.21
LINC00558-201ENST00000569422 FGF12P61328 243 aa7.48□□□□□ -1.21
LINC00558-201ENST00000569422 ZNF528Q3MIS6 628 aa7.48□□□□□ -1.21
LINC00558-201ENST00000569422 ZNF766Q5HY98 468 aa7.48□□□□□ -1.21
LINC00558-201ENST00000569422 UQCC3Q6UW78 93 aa7.48□□□□□ -1.21
LINC00558-201ENST00000569422 FAM180AQ6UWF9 173 aa7.48□□□□□ -1.21
LINC00558-201ENST00000569422 TMEM182Q6ZP80 229 aaPredicted RBP7.48□□□□□ -1.21
LINC00558-201ENST00000569422 KIRREL1Q96J84 757 aa7.48□□□□□ -1.21
LINC00558-201ENST00000569422 FER1L6-AS2Q96M78 137 aa7.48□□□□□ -1.21
LINC00558-201ENST00000569422 SUCNR1Q9BXA5 334 aa7.48□□□□□ -1.21
LINC00558-201ENST00000569422 SPRR3Q9UBC9 169 aa7.48□□□□□ -1.21
LINC00558-201ENST00000569422 OR14J1Q9UGF5 321 aa7.48□□□□□ -1.21
LINC00558-201ENST00000569422 ZDHHC8Q9ULC8 765 aa7.48□□□□□ -1.21
LINC00558-201ENST00000569422 FZR1Q9UM11 496 aa7.48□□□□□ -1.21
LINC00558-201ENST00000569422 TNRC6BQ9UPQ9 1833 aaKnown RBP7.48□□□□□ -1.21
LINC00558-201ENST00000569422 PCNX2A6NKB5 2137 aa7.47□□□□□ -1.21
LINC00558-201ENST00000569422 TRAV34A0A0B4J273 112 aa7.47□□□□□ -1.21
LINC00558-201ENST00000569422 TAAR5O14804 337 aa7.47□□□□□ -1.21
LINC00558-201ENST00000569422 SLC34A2O95436 690 aa7.47□□□□□ -1.21
LINC00558-201ENST00000569422 ARR3P36575 388 aa7.47□□□□□ -1.21
LINC00558-201ENST00000569422 UBE2G2P60604 165 aa7.47□□□□□ -1.21
LINC00558-201ENST00000569422 ALKBH6Q3KRA9 238 aa7.47□□□□□ -1.21
LINC00558-201ENST00000569422 MIDNQ504T8 468 aa7.47□□□□□ -1.21
LINC00558-201ENST00000569422 EDARADDQ8WWZ3 215 aa7.47□□□□□ -1.21
LINC00558-201ENST00000569422 GALNT14Q96FL9 552 aa7.47□□□□□ -1.21
LINC00558-201ENST00000569422 OR2J1Q9GZK6 312 aa7.47□□□□□ -1.21
LINC00558-201ENST00000569422 OR51M1Q9H341 326 aa7.47□□□□□ -1.21
LINC00558-201ENST00000569422 Q9N2K0 584 aa7.47□□□□□ -1.21
LINC00558-201ENST00000569422 FAM86C1Q9NVL1 165 aa7.47□□□□□ -1.21
LINC00558-201ENST00000569422 IL36GQ9NZH8 169 aa7.47□□□□□ -1.21
LINC00558-201ENST00000569422 IGKV1-6A0A0C4DH72 117 aa7.47□□□□□ -1.21
LINC00558-201ENST00000569422 HSPA12AO43301 675 aa7.47□□□□□ -1.21
LINC00558-201ENST00000569422 TFF1P04155 84 aa7.47□□□□□ -1.21
LINC00558-201ENST00000569422 PVALBP20472 110 aaPredicted RBP7.47□□□□□ -1.21
LINC00558-201ENST00000569422 APOBEC3AP31941 199 aaPredicted RBP7.47□□□□□ -1.21
LINC00558-201ENST00000569422 CEBPDP49716 269 aaPredicted RBP7.47□□□□□ -1.21
LINC00558-201ENST00000569422 HNF4GQ14541 408 aa7.47□□□□□ -1.21
LINC00558-201ENST00000569422 SPAG16Q8N0X2 631 aa7.47□□□□□ -1.21
LINC00558-201ENST00000569422 ZFP82Q8N141 532 aa7.47□□□□□ -1.21
LINC00558-201ENST00000569422 CLRN3Q8NCR9 226 aa7.47□□□□□ -1.21
LINC00558-201ENST00000569422 C18orf12Q96KH6 178 aa7.47□□□□□ -1.21
LINC00558-201ENST00000569422 LINC00470Q9BZP3 86 aa7.47□□□□□ -1.21
LINC00558-201ENST00000569422 ERRFI1Q9UJM3 462 aaPredicted RBP7.47□□□□□ -1.21
LINC00558-201ENST00000569422 CEP250Q9BV73 2442 aa7.47□□□□□ -1.21
LINC00558-201ENST00000569422 BORCS7-ASMTA0A0B4J1R7 106 aa7.47□□□□□ -1.21
LINC00558-201ENST00000569422 CDIPTO14735 213 aa7.47□□□□□ -1.21
LINC00558-201ENST00000569422 AGFG2O95081 481 aa7.47□□□□□ -1.21
LINC00558-201ENST00000569422 ZNF883P0CG24 379 aa7.47□□□□□ -1.21
LINC00558-201ENST00000569422 NKX2-1P43699 371 aaPredicted RBP7.47□□□□□ -1.21
LINC00558-201ENST00000569422 AKR1D1P51857 326 aa7.47□□□□□ -1.21
LINC00558-201ENST00000569422 MOGAT3Q86VF5 341 aa7.47□□□□□ -1.21
LINC00558-201ENST00000569422 FAM213BQ8TBF2 198 aa7.47□□□□□ -1.21
LINC00558-201ENST00000569422 TRIB1Q96RU8 372 aa7.47□□□□□ -1.21
LINC00558-201ENST00000569422 NRIP2Q9BQI9 281 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms