RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 ERGIC3Q9Y282 383 aa6.21□□□□□ -1.42
CDH3-209ENST00000569080 MOB4Q9Y3A3 225 aa6.21□□□□□ -1.42
CDH3-209ENST00000569080 IGHV3-43A0A0B4J1X8 118 aa6.2□□□□□ -1.42
CDH3-209ENST00000569080 IGHV1-3A0A0C4DH29 117 aa6.2□□□□□ -1.42
CDH3-209ENST00000569080 M0QZK8 103 aa6.2□□□□□ -1.42
CDH3-209ENST00000569080 SDCBPO00560 298 aaPredicted RBP6.2□□□□□ -1.42
CDH3-209ENST00000569080 FGF16O43320 207 aa6.2□□□□□ -1.42
CDH3-209ENST00000569080 PDCD6O75340 191 aa6.2□□□□□ -1.42
CDH3-209ENST00000569080 IGKV1D-33P01593 117 aa6.2□□□□□ -1.42
CDH3-209ENST00000569080 IGKV1-33P01594 117 aa6.2□□□□□ -1.42
CDH3-209ENST00000569080 UCHL1P09936 223 aa6.2□□□□□ -1.42
CDH3-209ENST00000569080 FAM106CPP0CH98 169 aa6.2□□□□□ -1.42
CDH3-209ENST00000569080 IGHV3-43DP0DP04 118 aa6.2□□□□□ -1.42
CDH3-209ENST00000569080 VSIG8P0DPA2 414 aa6.2□□□□□ -1.42
CDH3-209ENST00000569080 RCC1P18754 421 aaPredicted RBP6.2□□□□□ -1.42
CDH3-209ENST00000569080 GZMHP20718 246 aa6.2□□□□□ -1.42
CDH3-209ENST00000569080 CHATP28329 748 aa6.2□□□□□ -1.42
CDH3-209ENST00000569080 RAB7AP51149 207 aa6.2□□□□□ -1.42
CDH3-209ENST00000569080 ZNF134P52741 427 aa6.2□□□□□ -1.42
CDH3-209ENST00000569080 QRFPP83859 136 aa6.2□□□□□ -1.42
CDH3-209ENST00000569080 GABPB1Q06547 395 aaPredicted RBP6.2□□□□□ -1.42
CDH3-209ENST00000569080 UNC119Q13432 240 aa6.2□□□□□ -1.42
CDH3-209ENST00000569080 GPR50Q13585 617 aa6.2□□□□□ -1.42
CDH3-209ENST00000569080 ACSM3Q53FZ2 586 aa6.2□□□□□ -1.42
CDH3-209ENST00000569080 OR10K2Q6IF99 312 aa6.2□□□□□ -1.42
CDH3-209ENST00000569080 SLC25A48Q6ZT89 311 aaKnown RBP6.2□□□□□ -1.42
CDH3-209ENST00000569080 MS4A15Q8N5U1 240 aa6.2□□□□□ -1.42
CDH3-209ENST00000569080 OR5AU1Q8NGC0 362 aa6.2□□□□□ -1.42
CDH3-209ENST00000569080 OR10X1Q8NGY0 326 aa6.2□□□□□ -1.42
CDH3-209ENST00000569080 OR4K15Q8NH41 348 aa6.2□□□□□ -1.42
CDH3-209ENST00000569080 OR1L1Q8NH94 360 aa6.2□□□□□ -1.42
CDH3-209ENST00000569080 MRPL30Q8TCC3 161 aaKnown RBP6.2□□□□□ -1.42
CDH3-209ENST00000569080 NEK7Q8TDX7 302 aa6.2□□□□□ -1.42
CDH3-209ENST00000569080 CCDC107Q8WV48 283 aa6.2□□□□□ -1.42
CDH3-209ENST00000569080 CAPSLQ8WWF8 208 aa6.2□□□□□ -1.42
CDH3-209ENST00000569080 ARL11Q969Q4 196 aa6.2□□□□□ -1.42
CDH3-209ENST00000569080 FAM46BQ96A09 425 aa6.2□□□□□ -1.42
CDH3-209ENST00000569080 TMED9Q9BVK6 235 aa6.2□□□□□ -1.42
CDH3-209ENST00000569080 SELENOIQ9C0D9 397 aa6.2□□□□□ -1.42
CDH3-209ENST00000569080 KCNK15Q9H427 330 aa6.2□□□□□ -1.42
CDH3-209ENST00000569080 ETAA1Q9NY74 926 aa6.2□□□□□ -1.42
CDH3-209ENST00000569080 A0A0A6YYD4 124 aa6.19□□□□□ -1.42
CDH3-209ENST00000569080 TMEM14DPA8MWL7 114 aa6.19□□□□□ -1.42
CDH3-209ENST00000569080 MCRIP1C9JLW8 97 aa6.19□□□□□ -1.42
CDH3-209ENST00000569080 PTGES3LE9PB15 166 aa6.19□□□□□ -1.42
CDH3-209ENST00000569080 H0YHG0 523 aa6.19□□□□□ -1.42
CDH3-209ENST00000569080 CCRL2O00421 344 aa6.19□□□□□ -1.42
CDH3-209ENST00000569080 SLC22A1O15245 554 aa6.19□□□□□ -1.42
CDH3-209ENST00000569080 CA11O75493 328 aa6.19□□□□□ -1.42
CDH3-209ENST00000569080 CRTAPO75718 401 aaPredicted RBP6.19□□□□□ -1.42
CDH3-209ENST00000569080 HBZP02008 142 aa6.19□□□□□ -1.42
CDH3-209ENST00000569080 GLAP06280 429 aa6.19□□□□□ -1.42
CDH3-209ENST00000569080 UBBP0CG47 229 aa6.19□□□□□ -1.42
CDH3-209ENST00000569080 FUT3P21217 361 aa6.19□□□□□ -1.42
CDH3-209ENST00000569080 CRHBPP24387 322 aa6.19□□□□□ -1.42
CDH3-209ENST00000569080 REG1BP48304 166 aa6.19□□□□□ -1.42
CDH3-209ENST00000569080 RPS25P62851 125 aaKnown RBP6.19□□□□□ -1.42
CDH3-209ENST00000569080 RPS27AP62979 156 aaKnown RBP6.19□□□□□ -1.42
CDH3-209ENST00000569080 TPBGQ13641 420 aa6.19□□□□□ -1.42
CDH3-209ENST00000569080 GNMTQ14749 295 aa6.19□□□□□ -1.42
CDH3-209ENST00000569080 TMEM30BQ3MIR4 351 aa6.19□□□□□ -1.42
CDH3-209ENST00000569080 CT45A1Q5HYN5 189 aa6.19□□□□□ -1.42
CDH3-209ENST00000569080 RBM48Q5RL73 367 aaKnown RBP6.19□□□□□ -1.42
CDH3-209ENST00000569080 C6orf183Q5T699 404 aa6.19□□□□□ -1.42
CDH3-209ENST00000569080 SYT6Q5T7P8 510 aaPredicted RBP6.19□□□□□ -1.42
CDH3-209ENST00000569080 LIPKQ5VXJ0 399 aa6.19□□□□□ -1.42
CDH3-209ENST00000569080 TMEM91Q6ZNR0 172 aa6.19□□□□□ -1.42
CDH3-209ENST00000569080 C5orf24Q7Z6I8 188 aa6.19□□□□□ -1.42
CDH3-209ENST00000569080 ZNF554Q86TJ5 538 aa6.19□□□□□ -1.42
CDH3-209ENST00000569080 OR4F17Q8NGA8 305 aa6.19□□□□□ -1.42
CDH3-209ENST00000569080 CT45A3Q8NHU0 189 aa6.19□□□□□ -1.42
CDH3-209ENST00000569080 RTN4IP1Q8WWV3 396 aaPredicted RBP6.19□□□□□ -1.42
CDH3-209ENST00000569080 MYDGFQ969H8 173 aa6.19□□□□□ -1.42
CDH3-209ENST00000569080 R3HDM4Q96D70 268 aa6.19□□□□□ -1.42
CDH3-209ENST00000569080 RBMXL1Q96E39 390 aaKnown RBP6.19□□□□□ -1.42
CDH3-209ENST00000569080 EAF1Q96JC9 268 aaPredicted RBP6.19□□□□□ -1.42
CDH3-209ENST00000569080 OR4F4Q96R69 305 aa6.19□□□□□ -1.42
CDH3-209ENST00000569080 SULT4A1Q9BR01 284 aa6.19□□□□□ -1.42
CDH3-209ENST00000569080 TM2D1Q9BX74 207 aa6.19□□□□□ -1.42
CDH3-209ENST00000569080 CST11Q9H112 138 aa6.19□□□□□ -1.42
CDH3-209ENST00000569080 GHRLQ9UBU3 117 aa6.19□□□□□ -1.42
CDH3-209ENST00000569080 PEX16Q9Y5Y5 336 aa6.19□□□□□ -1.42
CDH3-209ENST00000569080 COL7A1Q02388 2944 aa6.18□□□□□ -1.42
CDH3-209ENST00000569080 IGHV3-72A0A0B4J1Y9 119 aa6.18□□□□□ -1.42
CDH3-209ENST00000569080 A0A1W2PRX2 142 aa6.18□□□□□ -1.42
CDH3-209ENST00000569080 FOXI3A8MTJ6 420 aaPredicted RBP6.18□□□□□ -1.42
CDH3-209ENST00000569080 ZNF736B4DX44 427 aaPredicted RBP6.18□□□□□ -1.42
CDH3-209ENST00000569080 PEX14O75381 377 aa6.18□□□□□ -1.42
CDH3-209ENST00000569080 MPIG6BO95866 241 aa6.18□□□□□ -1.42
CDH3-209ENST00000569080 NAPSAO96009 420 aa6.18□□□□□ -1.42
CDH3-209ENST00000569080 IGHG2P01859 326 aa6.18□□□□□ -1.42
CDH3-209ENST00000569080 TMEM11P17152 192 aa6.18□□□□□ -1.42
CDH3-209ENST00000569080 HTR2CP28335 458 aa6.18□□□□□ -1.42
CDH3-209ENST00000569080 EMX1Q04741 257 aaPredicted RBP6.18□□□□□ -1.42
CDH3-209ENST00000569080 MLLT11Q13015 90 aaPredicted RBP6.18□□□□□ -1.42
CDH3-209ENST00000569080 MED22Q15528 200 aa6.18□□□□□ -1.42
CDH3-209ENST00000569080 HMGN3Q15651 99 aa6.18□□□□□ -1.42
CDH3-209ENST00000569080 TBCEQ15813 527 aaPredicted RBP6.18□□□□□ -1.42
CDH3-209ENST00000569080 HSD17B12Q53GQ0 312 aa6.18□□□□□ -1.42
CDH3-209ENST00000569080 OXLD1Q5BKU9 147 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms