RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 CCDC71LQ8N9Z2 235 aa5.92□□□□□ -1.46
SMG1-215ENST00000568239 OR1L1Q8NH94 360 aa5.92□□□□□ -1.46
SMG1-215ENST00000568239 CCL17Q92583 94 aa5.92□□□□□ -1.46
SMG1-215ENST00000568239 GALMQ96C23 342 aa5.92□□□□□ -1.46
SMG1-215ENST00000568239 PIK3IP1Q96FE7 263 aa5.92□□□□□ -1.46
SMG1-215ENST00000568239 COQ2Q96H96 371 aa5.92□□□□□ -1.46
SMG1-215ENST00000568239 DCTN5Q9BTE1 182 aa5.92□□□□□ -1.46
SMG1-215ENST00000568239 KCNS2Q9ULS6 477 aa5.92□□□□□ -1.46
SMG1-215ENST00000568239 OR2W1Q9Y3N9 320 aa5.92□□□□□ -1.46
SMG1-215ENST00000568239 IGSF10Q6WRI0 2623 aa5.92□□□□□ -1.46
SMG1-215ENST00000568239 COL12A1Q99715 3063 aa5.92□□□□□ -1.46
SMG1-215ENST00000568239 USF3Q68DE3 2245 aa5.92□□□□□ -1.46
SMG1-215ENST00000568239 TRBV6-7A0A0A0MS04 114 aa5.92□□□□□ -1.46
SMG1-215ENST00000568239 DBX1A6NMT0 343 aa5.92□□□□□ -1.46
SMG1-215ENST00000568239 ZG16O60844 167 aa5.92□□□□□ -1.46
SMG1-215ENST00000568239 OR8U9P0C7N5 309 aa5.92□□□□□ -1.46
SMG1-215ENST00000568239 SELLP14151 372 aa5.92□□□□□ -1.46
SMG1-215ENST00000568239 SSTR5P35346 364 aa5.92□□□□□ -1.46
SMG1-215ENST00000568239 FGL1Q08830 312 aa5.92□□□□□ -1.46
SMG1-215ENST00000568239 FBXL19-AS1Q494R0 122 aa5.92□□□□□ -1.46
SMG1-215ENST00000568239 ZNF880Q6PDB4 577 aa5.92□□□□□ -1.46
SMG1-215ENST00000568239 ZNF546Q86UE3 836 aa5.92□□□□□ -1.46
SMG1-215ENST00000568239 DMRTC2Q8IXT2 367 aaPredicted RBP5.92□□□□□ -1.46
SMG1-215ENST00000568239 CMTM1Q8IZ96 169 aa5.92□□□□□ -1.46
SMG1-215ENST00000568239 OR8H1Q8NGG4 311 aa5.92□□□□□ -1.46
SMG1-215ENST00000568239 OR8U1Q8NH10 309 aa5.92□□□□□ -1.46
SMG1-215ENST00000568239 PPP1R35Q8TAP8 253 aa5.92□□□□□ -1.46
SMG1-215ENST00000568239 NINJ1Q92982 152 aa5.92□□□□□ -1.46
SMG1-215ENST00000568239 EGLN1Q9GZT9 426 aa5.92□□□□□ -1.46
SMG1-215ENST00000568239 SHARPINQ9H0F6 387 aa5.92□□□□□ -1.46
SMG1-215ENST00000568239 RAB18Q9NP72 206 aa5.92□□□□□ -1.46
SMG1-215ENST00000568239 UBE2J1Q9Y385 318 aaPredicted RBP5.92□□□□□ -1.46
SMG1-215ENST00000568239 RNF115Q9Y4L5 304 aa5.92□□□□□ -1.46
SMG1-215ENST00000568239 IGHV3-43A0A0B4J1X8 118 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 OOEPA6NGQ2 149 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 LRRC30A6NM36 301 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 C12orf77C9JDV5 145 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 GPR31O00270 319 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 MPPED1O15442 326 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 RGS11O94810 467 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 IFNA21P01568 189 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 GYPAP02724 150 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 IGHV3-43DP0DP04 118 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 CXCL2P19875 107 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 APOBEC3AP31941 199 aaPredicted RBP5.91□□□□□ -1.46
SMG1-215ENST00000568239 CFHR2P36980 270 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 GATA4P43694 442 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 UCP3P55916 312 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 SLC35E4Q6ICL7 350 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 FAM53AQ6NSI3 398 aaPredicted RBP5.91□□□□□ -1.46
SMG1-215ENST00000568239 TBC1D26Q86UD7 250 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 OR13A1Q8NGR1 328 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 OR51H1Q8NH63 302 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 THAP6Q8TBB0 222 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 ARL11Q969Q4 196 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 OR10C1Q96KK4 312 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 VRK1Q99986 396 aaPredicted RBP5.91□□□□□ -1.46
SMG1-215ENST00000568239 RSRP1Q9BUV0 290 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 GON7Q9BXV9 100 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 MFFQ9GZY8 342 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 SLA2Q9H6Q3 261 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 MBNL3Q9NUK0 354 aaKnown RBP5.91□□□□□ -1.46
SMG1-215ENST00000568239 USP24Q9UPU5 2620 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 TRAV14DV4A0A0A6YYC5 116 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 C3orf85A0A1B0GTC6 90 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 A0A1B0GW55 424 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 KCNAB3O43448 404 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 TUSC2O75896 110 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 SCGB1D2O95969 90 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 LHBP01229 141 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 HBZP02008 142 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 DUX4L2P0CJ85 424 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 DUX4L3P0CJ86 424 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 DUX4L4P0CJ87 422 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 DUX4L5P0CJ88 424 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 DUX4L6P0CJ89 424 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 DUX4L7P0CJ90 424 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 HLA-GP17693 338 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 LUMP51884 338 aaPredicted RBP5.91□□□□□ -1.46
SMG1-215ENST00000568239 S100A10P60903 97 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 IAH1Q2TAA2 248 aaPredicted RBP5.91□□□□□ -1.46
SMG1-215ENST00000568239 BEX5Q5H9J7 111 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 DUX4L9Q6RFH8 374 aaPredicted RBP5.91□□□□□ -1.46
SMG1-215ENST00000568239 FAM90A1Q86YD7 464 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 H1FOOQ8IZA3 346 aaPredicted RBP5.91□□□□□ -1.46
SMG1-215ENST00000568239 OR52L2PQ8NGH6 319 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 OR10V1Q8NGI7 309 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 TP53RKQ96S44 253 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 CCL13Q99616 98 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 ARL6Q9H0F7 186 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 PARP12Q9H0J9 701 aaKnown RBP5.91□□□□□ -1.46
SMG1-215ENST00000568239 OR2S2Q9NQN1 319 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 DUX4Q9UBX2 424 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 RALYQ9UKM9 306 aaKnown RBP5.91□□□□□ -1.46
SMG1-215ENST00000568239 RNF150Q9ULK6 438 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 MAB21L2Q9Y586 359 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 EPG5Q9HCE0 2579 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 DEFB108AA8MXU0 73 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 TMPRSS2O15393 492 aa5.91□□□□□ -1.46
SMG1-215ENST00000568239 ZNF737O75373 536 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms