RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 TRAV39A0A0B4J263 110 aa9.92□□□□□ -0.82
SF3B3-208ENST00000567250 ODF3BA8MYP8 253 aa9.92□□□□□ -0.82
SF3B3-208ENST00000567250 C12orf77C9JDV5 145 aa9.92□□□□□ -0.82
SF3B3-208ENST00000567250 F2RL2O00254 374 aa9.92□□□□□ -0.82
SF3B3-208ENST00000567250 SDCBPO00560 298 aaPredicted RBP9.92□□□□□ -0.82
SF3B3-208ENST00000567250 GNB3P16520 340 aa9.92□□□□□ -0.82
SF3B3-208ENST00000567250 RCC1P18754 421 aaPredicted RBP9.92□□□□□ -0.82
SF3B3-208ENST00000567250 TALDO1P37837 337 aa9.92□□□□□ -0.82
SF3B3-208ENST00000567250 ARHGDIBP52566 201 aa9.92□□□□□ -0.82
SF3B3-208ENST00000567250 PRRX1P54821 245 aa9.92□□□□□ -0.82
SF3B3-208ENST00000567250 DLX1P56177 255 aa9.92□□□□□ -0.82
SF3B3-208ENST00000567250 HILS1P60008 231 aa9.92□□□□□ -0.82
SF3B3-208ENST00000567250 MINOS1Q5TGZ0 78 aa9.92□□□□□ -0.82
SF3B3-208ENST00000567250 HCP5Q6MZN7 132 aa9.92□□□□□ -0.82
SF3B3-208ENST00000567250 ABHD12Q8N2K0 398 aa9.92□□□□□ -0.82
SF3B3-208ENST00000567250 PRR18Q8N4B5 295 aa9.92□□□□□ -0.82
SF3B3-208ENST00000567250 SAMD12Q8N8I0 201 aa9.92□□□□□ -0.82
SF3B3-208ENST00000567250 BEND2Q8NDZ0 799 aa9.92□□□□□ -0.82
SF3B3-208ENST00000567250 OR9G1Q8NH87 305 aa9.92□□□□□ -0.82
SF3B3-208ENST00000567250 GALMQ96C23 342 aa9.92□□□□□ -0.82
SF3B3-208ENST00000567250 ABCG5Q9H222 651 aa9.92□□□□□ -0.82
SF3B3-208ENST00000567250 TAF9BQ9HBM6 251 aa9.92□□□□□ -0.82
SF3B3-208ENST00000567250 JPT1Q9UK76 154 aa9.92□□□□□ -0.82
SF3B3-208ENST00000567250 MINOS1-NBL1R4GNA1 71 aa9.92□□□□□ -0.82
SF3B3-208ENST00000567250 A0A0U1RQK1 487 aa9.91□□□□□ -0.82
SF3B3-208ENST00000567250 A0A1W2PRD5 423 aa9.91□□□□□ -0.82
SF3B3-208ENST00000567250 A0A1W2PRF3 423 aa9.91□□□□□ -0.82
SF3B3-208ENST00000567250 A0A1W2PRM7 423 aa9.91□□□□□ -0.82
SF3B3-208ENST00000567250 BTBD17A6NE02 478 aa9.91□□□□□ -0.82
SF3B3-208ENST00000567250 H3BMQ9 156 aa9.91□□□□□ -0.82
SF3B3-208ENST00000567250 C15orf65H3BRN8 121 aa9.91□□□□□ -0.82
SF3B3-208ENST00000567250 ZNF701M0R085 212 aaPredicted RBP9.91□□□□□ -0.82
SF3B3-208ENST00000567250 MMP23AO75900 390 aa9.91□□□□□ -0.82
SF3B3-208ENST00000567250 RGS11O94810 467 aa9.91□□□□□ -0.82
SF3B3-208ENST00000567250 HBZP02008 142 aa9.91□□□□□ -0.82
SF3B3-208ENST00000567250 CEACAM3P40198 252 aa9.91□□□□□ -0.82
SF3B3-208ENST00000567250 KIR2DS4P43632 304 aa9.91□□□□□ -0.82
SF3B3-208ENST00000567250 GNG2P59768 71 aa9.91□□□□□ -0.82
SF3B3-208ENST00000567250 HLA-DRB3P79483 266 aa9.91□□□□□ -0.82
SF3B3-208ENST00000567250 PRB3Q04118 309 aaPredicted RBP9.91□□□□□ -0.82
SF3B3-208ENST00000567250 KIR2DS1Q14954 304 aa9.91□□□□□ -0.82
SF3B3-208ENST00000567250 SPCS2Q15005 226 aa9.91□□□□□ -0.82
SF3B3-208ENST00000567250 HMGN3Q15651 99 aa9.91□□□□□ -0.82
SF3B3-208ENST00000567250 LTC4SQ16873 150 aa9.91□□□□□ -0.82
SF3B3-208ENST00000567250 PNLIPRP3Q17RR3 467 aa9.91□□□□□ -0.82
SF3B3-208ENST00000567250 DEFB112Q30KQ8 113 aa9.91□□□□□ -0.82
SF3B3-208ENST00000567250 TMEM69Q5SWH9 247 aa9.91□□□□□ -0.82
SF3B3-208ENST00000567250 HACD4Q5VWC8 232 aa9.91□□□□□ -0.82
SF3B3-208ENST00000567250 ZNF880Q6PDB4 577 aa9.91□□□□□ -0.82
SF3B3-208ENST00000567250 LDLRAD3Q86YD5 345 aa9.91□□□□□ -0.82
SF3B3-208ENST00000567250 SIGLECL1Q8N7X8 197 aa9.91□□□□□ -0.82
SF3B3-208ENST00000567250 RFESDQ8TAC1 157 aa9.91□□□□□ -0.82
SF3B3-208ENST00000567250 ZNF286AQ9HBT8 521 aa9.91□□□□□ -0.82
SF3B3-208ENST00000567250 GFOD1Q9NXC2 390 aa9.91□□□□□ -0.82
SF3B3-208ENST00000567250 CCDC59Q9P031 241 aaKnown RBP9.91□□□□□ -0.82
SF3B3-208ENST00000567250 ZNRD1Q9P1U0 126 aa9.91□□□□□ -0.82
SF3B3-208ENST00000567250 COMMD3Q9UBI1 195 aa9.91□□□□□ -0.82
SF3B3-208ENST00000567250 GNG12Q9UBI6 72 aa9.91□□□□□ -0.82
SF3B3-208ENST00000567250 RSL24D1Q9UHA3 163 aaKnown RBP9.91□□□□□ -0.82
SF3B3-208ENST00000567250 ANK3Q12955 4377 aaKnown RBP9.91□□□□□ -0.82
SF3B3-208ENST00000567250 SMIM31A0A1B0GVY4 71 aa9.9□□□□□ -0.82
SF3B3-208ENST00000567250 FAM172BPA6NC97 362 aa9.9□□□□□ -0.82
SF3B3-208ENST00000567250 TRIM77I1YAP6 450 aa9.9□□□□□ -0.82
SF3B3-208ENST00000567250 APOA1P02647 267 aa9.9□□□□□ -0.82
SF3B3-208ENST00000567250 FCGR3AP08637 254 aa9.9□□□□□ -0.82
SF3B3-208ENST00000567250 DTYMKP23919 212 aa9.9□□□□□ -0.82
SF3B3-208ENST00000567250 IL3RAP26951 378 aa9.9□□□□□ -0.82
SF3B3-208ENST00000567250 HTR1DP28221 377 aa9.9□□□□□ -0.82
SF3B3-208ENST00000567250 GDNFP39905 211 aa9.9□□□□□ -0.82
SF3B3-208ENST00000567250 MNDAP41218 407 aa9.9□□□□□ -0.82
SF3B3-208ENST00000567250 HTD2P86397 168 aa9.9□□□□□ -0.82
SF3B3-208ENST00000567250 BAMBIQ13145 260 aa9.9□□□□□ -0.82
SF3B3-208ENST00000567250 HLA-DRB5Q30154 266 aa9.9□□□□□ -0.82
SF3B3-208ENST00000567250 CDNFQ49AH0 187 aa9.9□□□□□ -0.82
SF3B3-208ENST00000567250 STEAP3Q658P3 488 aa9.9□□□□□ -0.82
SF3B3-208ENST00000567250 BCL6BQ8N143 479 aaPredicted RBP9.9□□□□□ -0.82
SF3B3-208ENST00000567250 C8orf31Q8N9H6 132 aa9.9□□□□□ -0.82
SF3B3-208ENST00000567250 SSMEM1Q8WWF3 244 aa9.9□□□□□ -0.82
SF3B3-208ENST00000567250 MALSU1Q96EH3 234 aa9.9□□□□□ -0.82
SF3B3-208ENST00000567250 HDHD3Q9BSH5 251 aaPredicted RBP9.9□□□□□ -0.82
SF3B3-208ENST00000567250 MMP28Q9H239 520 aa9.9□□□□□ -0.82
SF3B3-208ENST00000567250 DPAGT1Q9H3H5 408 aa9.9□□□□□ -0.82
SF3B3-208ENST00000567250 PRDM13Q9H4Q3 707 aa9.9□□□□□ -0.82
SF3B3-208ENST00000567250 Q9N2K0 584 aa9.9□□□□□ -0.82
SF3B3-208ENST00000567250 OR2S2Q9NQN1 319 aa9.9□□□□□ -0.82
SF3B3-208ENST00000567250 ADAM30Q9UKF2 790 aa9.9□□□□□ -0.82
SF3B3-208ENST00000567250 KCNK7Q9Y2U2 307 aa9.9□□□□□ -0.82
SF3B3-208ENST00000567250 POMT1Q9Y6A1 747 aa9.9□□□□□ -0.82
SF3B3-208ENST00000567250 CEPT1Q9Y6K0 416 aa9.9□□□□□ -0.82
SF3B3-208ENST00000567250 TRAV18A0A075B6X5 111 aa9.89□□□□□ -0.83
SF3B3-208ENST00000567250 TMEM235A6NFC5 223 aa9.89□□□□□ -0.83
SF3B3-208ENST00000567250 LEUTXA8MZ59 168 aa9.89□□□□□ -0.83
SF3B3-208ENST00000567250 XRCC3O43542 346 aa9.89□□□□□ -0.83
SF3B3-208ENST00000567250 IGLV1-47P01700 117 aa9.89□□□□□ -0.83
SF3B3-208ENST00000567250 LPLP06858 475 aa9.89□□□□□ -0.83
SF3B3-208ENST00000567250 GNG10P50151 68 aa9.89□□□□□ -0.83
SF3B3-208ENST00000567250 AANATQ16613 207 aa9.89□□□□□ -0.83
SF3B3-208ENST00000567250 SRSF7Q16629 238 aaKnown RBP eCLIP9.89□□□□□ -0.83
SF3B3-208ENST00000567250 ZNF260Q3ZCT1 412 aa9.89□□□□□ -0.83
SF3B3-208ENST00000567250 OLFML2AQ68BL7 652 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms