RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 OR51M1Q9H341 326 aa12.15□□□□□ -0.46
CDH1-209ENST00000566510 TMPRSS5Q9H3S3 457 aa12.15□□□□□ -0.46
CDH1-209ENST00000566510 SMOC1Q9H4F8 434 aa12.15□□□□□ -0.46
CDH1-209ENST00000566510 PPP1R3CQ9UQK1 317 aa12.15□□□□□ -0.46
CDH1-209ENST00000566510 OR2W1Q9Y3N9 320 aa12.15□□□□□ -0.46
CDH1-209ENST00000566510 CLEC18AA5D8T8 446 aa12.14□□□□□ -0.47
CDH1-209ENST00000566510 CD300LBA8K4G0 201 aa12.14□□□□□ -0.47
CDH1-209ENST00000566510 SYNGR4O95473 234 aa12.14□□□□□ -0.47
CDH1-209ENST00000566510 CNOT4O95628 575 aaKnown RBP12.14□□□□□ -0.47
CDH1-209ENST00000566510 HSPB1P04792 205 aaKnown RBP12.14□□□□□ -0.47
CDH1-209ENST00000566510 ERVFRD-1P60508 538 aa12.14□□□□□ -0.47
CDH1-209ENST00000566510 HNF4GQ14541 408 aa12.14□□□□□ -0.47
CDH1-209ENST00000566510 ELOBQ15370 118 aa12.14□□□□□ -0.47
CDH1-209ENST00000566510 PCSK4Q6UW60 755 aa12.14□□□□□ -0.47
CDH1-209ENST00000566510 VASH2Q86V25 355 aa12.14□□□□□ -0.47
CDH1-209ENST00000566510 SAXO1Q8IYX7 474 aa12.14□□□□□ -0.47
CDH1-209ENST00000566510 CLEC18CQ8NCF0 446 aa12.14□□□□□ -0.47
CDH1-209ENST00000566510 OR8G5Q8NG78 346 aa12.14□□□□□ -0.47
CDH1-209ENST00000566510 OR1A1Q9P1Q5 309 aa12.14□□□□□ -0.47
CDH1-209ENST00000566510 TRBV23-1A0A0A0MS06 115 aa12.14□□□□□ -0.47
CDH1-209ENST00000566510 IGHV3-64DA0A0J9YX35 117 aa12.14□□□□□ -0.47
CDH1-209ENST00000566510 ANKRD30BLA7E2S9 258 aa12.14□□□□□ -0.47
CDH1-209ENST00000566510 YKT6O15498 198 aa12.14□□□□□ -0.47
CDH1-209ENST00000566510 DFFBO76075 338 aa12.14□□□□□ -0.47
CDH1-209ENST00000566510 HBE1P02100 147 aa12.14□□□□□ -0.47
CDH1-209ENST00000566510 METTL15P1P0C7V9 234 aa12.14□□□□□ -0.47
CDH1-209ENST00000566510 S100PP25815 95 aa12.14□□□□□ -0.47
CDH1-209ENST00000566510 FGF8P55075 233 aaPredicted RBP12.14□□□□□ -0.47
CDH1-209ENST00000566510 PLP2Q04941 152 aa12.14□□□□□ -0.47
CDH1-209ENST00000566510 LPAL2Q16609 132 aa12.14□□□□□ -0.47
CDH1-209ENST00000566510 ZNF506Q5JVG8 444 aa12.14□□□□□ -0.47
CDH1-209ENST00000566510 SPATA46Q5T0L3 261 aa12.14□□□□□ -0.47
CDH1-209ENST00000566510 TIPARPQ7Z3E1 657 aaKnown RBP12.14□□□□□ -0.47
CDH1-209ENST00000566510 C1QL4Q86Z23 238 aa12.14□□□□□ -0.47
CDH1-209ENST00000566510 OR5A2Q8NGI9 324 aa12.14□□□□□ -0.47
CDH1-209ENST00000566510 TMEM45BQ96B21 275 aa12.14□□□□□ -0.47
CDH1-209ENST00000566510 YPEL4Q96NS1 127 aa12.14□□□□□ -0.47
CDH1-209ENST00000566510 PRDM6Q9NQX0 595 aa12.14□□□□□ -0.47
CDH1-209ENST00000566510 CACNG5Q9UF02 275 aa12.14□□□□□ -0.47
CDH1-209ENST00000566510 KCNS2Q9ULS6 477 aa12.14□□□□□ -0.47
CDH1-209ENST00000566510 RHBDL1O75783 438 aa12.14□□□□□ -0.47
CDH1-209ENST00000566510 SERPINA7P05543 415 aa12.14□□□□□ -0.47
CDH1-209ENST00000566510 MMP9P14780 707 aa12.14□□□□□ -0.47
CDH1-209ENST00000566510 C3AR1Q16581 482 aa12.14□□□□□ -0.47
CDH1-209ENST00000566510 SRSF7Q16629 238 aaKnown RBP eCLIP12.14□□□□□ -0.47
CDH1-209ENST00000566510 PDZD11Q5EBL8 140 aa12.14□□□□□ -0.47
CDH1-209ENST00000566510 FAM209BQ5JX69 171 aa12.14□□□□□ -0.47
CDH1-209ENST00000566510 C6orf15Q6UXA7 325 aaPredicted RBP12.14□□□□□ -0.47
CDH1-209ENST00000566510 FAM58AQ8N1B3 248 aa12.14□□□□□ -0.47
CDH1-209ENST00000566510 POM121Q96HA1 1249 aa12.14□□□□□ -0.47
CDH1-209ENST00000566510 DOCK11Q5JSL3 2073 aa12.13□□□□□ -0.47
CDH1-209ENST00000566510 ARHGAP21Q5T5U3 1957 aa12.13□□□□□ -0.47
CDH1-209ENST00000566510 TRAV24A0A0B4J272 114 aa12.13□□□□□ -0.47
CDH1-209ENST00000566510 PDGFBP01127 241 aaPredicted RBP12.13□□□□□ -0.47
CDH1-209ENST00000566510 CA6P23280 308 aa12.13□□□□□ -0.47
CDH1-209ENST00000566510 MAGEA5P43359 124 aa12.13□□□□□ -0.47
CDH1-209ENST00000566510 SSPNQ14714 243 aa12.13□□□□□ -0.47
CDH1-209ENST00000566510 Q6ZRM9 215 aa12.13□□□□□ -0.47
CDH1-209ENST00000566510 APH1AQ96BI3 265 aa12.13□□□□□ -0.47
CDH1-209ENST00000566510 GGACTQ9BVM4 153 aa12.13□□□□□ -0.47
CDH1-209ENST00000566510 VSIRQ9H7M9 311 aa12.13□□□□□ -0.47
CDH1-209ENST00000566510 DOK5Q9P104 306 aa12.13□□□□□ -0.47
CDH1-209ENST00000566510 DEGS1O15121 323 aa12.13□□□□□ -0.47
CDH1-209ENST00000566510 TNRC18O15417 2968 aaPredicted RBP12.13□□□□□ -0.47
CDH1-209ENST00000566510 PPIHO43447 177 aaKnown RBP12.13□□□□□ -0.47
CDH1-209ENST00000566510 CER1O95813 267 aa12.13□□□□□ -0.47
CDH1-209ENST00000566510 S100A2P29034 98 aa12.13□□□□□ -0.47
CDH1-209ENST00000566510 CD200P41217 278 aa12.13□□□□□ -0.47
CDH1-209ENST00000566510 LHX2P50458 406 aa12.13□□□□□ -0.47
CDH1-209ENST00000566510 NRN1LQ496H8 165 aa12.13□□□□□ -0.47
CDH1-209ENST00000566510 ZNF324BQ6AW86 544 aaPredicted RBP12.13□□□□□ -0.47
CDH1-209ENST00000566510 OR2T2Q6IF00 324 aa12.13□□□□□ -0.47
CDH1-209ENST00000566510 OR2M7Q8NG81 312 aa12.13□□□□□ -0.47
CDH1-209ENST00000566510 RIMS4Q9H426 269 aaPredicted RBP12.13□□□□□ -0.47
CDH1-209ENST00000566510 C12orf49Q9H741 205 aa12.13□□□□□ -0.47
CDH1-209ENST00000566510 RPRMQ9NS64 109 aa12.13□□□□□ -0.47
CDH1-209ENST00000566510 A0A1B0GU03 582 aa12.12□□□□□ -0.47
CDH1-209ENST00000566510 MAS1LP35410 378 aa12.12□□□□□ -0.47
CDH1-209ENST00000566510 HLA-DRB3P79483 266 aa12.12□□□□□ -0.47
CDH1-209ENST00000566510 MYPOPQ86VE0 399 aaPredicted RBP12.12□□□□□ -0.47
CDH1-209ENST00000566510 LILRB2Q8N423 598 aa12.12□□□□□ -0.47
CDH1-209ENST00000566510 ZNF610Q8N9Z0 462 aa12.12□□□□□ -0.47
CDH1-209ENST00000566510 OR10V1Q8NGI7 309 aa12.12□□□□□ -0.47
CDH1-209ENST00000566510 OR1K1Q8NGR3 316 aa12.12□□□□□ -0.47
CDH1-209ENST00000566510 OR5P3Q8WZ94 311 aa12.12□□□□□ -0.47
CDH1-209ENST00000566510 ZNF665Q9H7R5 613 aa12.12□□□□□ -0.47
CDH1-209ENST00000566510 DLL3Q9NYJ7 618 aa12.12□□□□□ -0.47
CDH1-209ENST00000566510 PLA2G3Q9NZ20 509 aa12.12□□□□□ -0.47
CDH1-209ENST00000566510 PSENENQ9NZ42 101 aa12.12□□□□□ -0.47
CDH1-209ENST00000566510 LOXL2Q9Y4K0 774 aa12.12□□□□□ -0.47
CDH1-209ENST00000566510 MED13Q9UHV7 2174 aa12.12□□□□□ -0.47
CDH1-209ENST00000566510 IGKV3D-15A0A087WSY6 115 aa12.12□□□□□ -0.47
CDH1-209ENST00000566510 WDR1O75083 606 aa12.12□□□□□ -0.47
CDH1-209ENST00000566510 TRGC2P03986 189 aa12.12□□□□□ -0.47
CDH1-209ENST00000566510 CEACAM1P13688 526 aa12.12□□□□□ -0.47
CDH1-209ENST00000566510 OR8G1Q15617 311 aa12.12□□□□□ -0.47
CDH1-209ENST00000566510 KHDC3LQ587J8 217 aa12.12□□□□□ -0.47
CDH1-209ENST00000566510 ABHD17BQ5VST6 288 aa12.12□□□□□ -0.47
CDH1-209ENST00000566510 ZNF787Q6DD87 383 aa12.12□□□□□ -0.47
CDH1-209ENST00000566510 LINC00696Q6ZRV3 163 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms