RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 NBEAL1Q6ZS30 2694 aa14.1□□□□□ -0.15
RAB40C-210ENST00000566290 STAB1Q9NY15 2570 aa14.09□□□□□ -0.15
RAB40C-210ENST00000566290 L7N2F9 121 aa14.09□□□□□ -0.15
RAB40C-210ENST00000566290 SIX6O95475 246 aa14.09□□□□□ -0.15
RAB40C-210ENST00000566290 THBDP07204 575 aa14.09□□□□□ -0.15
RAB40C-210ENST00000566290 FOSL1P15407 271 aa14.09□□□□□ -0.15
RAB40C-210ENST00000566290 ZNF81P51508 661 aa14.09□□□□□ -0.15
RAB40C-210ENST00000566290 PIGPP57054 158 aa14.09□□□□□ -0.15
RAB40C-210ENST00000566290 SORDQ00796 357 aa14.09□□□□□ -0.15
RAB40C-210ENST00000566290 BAMBIQ13145 260 aa14.09□□□□□ -0.15
RAB40C-210ENST00000566290 ANKRD55Q3KP44 614 aa14.09□□□□□ -0.15
RAB40C-210ENST00000566290 ABCA11PQ4W5N1 156 aa14.09□□□□□ -0.15
RAB40C-210ENST00000566290 C11orf87Q6NUJ2 197 aa14.09□□□□□ -0.15
RAB40C-210ENST00000566290 CASTOR1Q8WTX7 329 aa14.09□□□□□ -0.15
RAB40C-210ENST00000566290 FAM222BQ8WU58 562 aa14.09□□□□□ -0.15
RAB40C-210ENST00000566290 RTN4IP1Q8WWV3 396 aaPredicted RBP14.09□□□□□ -0.15
RAB40C-210ENST00000566290 ELMOD3Q96FG2 381 aa14.09□□□□□ -0.15
RAB40C-210ENST00000566290 MSL2Q9HCI7 577 aa14.09□□□□□ -0.15
RAB40C-210ENST00000566290 IGKV1-6A0A0C4DH72 117 aa14.08□□□□□ -0.16
RAB40C-210ENST00000566290 A0A0D9SG52 128 aa14.08□□□□□ -0.16
RAB40C-210ENST00000566290 TUBAL3A6NHL2 446 aa14.08□□□□□ -0.16
RAB40C-210ENST00000566290 A6NLC8 198 aa14.08□□□□□ -0.16
RAB40C-210ENST00000566290 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.08□□□□□ -0.16
RAB40C-210ENST00000566290 OR2F2O95006 317 aa14.08□□□□□ -0.16
RAB40C-210ENST00000566290 LHBP01229 141 aa14.08□□□□□ -0.16
RAB40C-210ENST00000566290 PET100P0DJ07 73 aa14.08□□□□□ -0.16
RAB40C-210ENST00000566290 DUSP1P28562 367 aa14.08□□□□□ -0.16
RAB40C-210ENST00000566290 S100A11P31949 105 aa14.08□□□□□ -0.16
RAB40C-210ENST00000566290 OR2F1Q13607 317 aa14.08□□□□□ -0.16
RAB40C-210ENST00000566290 IGSF11Q5DX21 431 aa14.08□□□□□ -0.16
RAB40C-210ENST00000566290 OR2Z1Q8NG97 314 aa14.08□□□□□ -0.16
RAB40C-210ENST00000566290 SPATA3Q8NHX4 192 aa14.08□□□□□ -0.16
RAB40C-210ENST00000566290 PLPPR1Q8TBJ4 325 aa14.08□□□□□ -0.16
RAB40C-210ENST00000566290 KIRREL1Q96J84 757 aa14.08□□□□□ -0.16
RAB40C-210ENST00000566290 C2orf50Q96LR7 162 aa14.08□□□□□ -0.16
RAB40C-210ENST00000566290 PDCD10Q9BUL8 212 aa14.08□□□□□ -0.16
RAB40C-210ENST00000566290 MRPL37Q9BZE1 423 aaKnown RBP14.08□□□□□ -0.16
RAB40C-210ENST00000566290 TNFSF18Q9UNG2 199 aa14.08□□□□□ -0.16
RAB40C-210ENST00000566290 OR2W1Q9Y3N9 320 aa14.08□□□□□ -0.16
RAB40C-210ENST00000566290 TEX13DA0A0J9YY54 714 aaPredicted RBP14.07□□□□□ -0.16
RAB40C-210ENST00000566290 VSTM5A8MXK1 200 aa14.07□□□□□ -0.16
RAB40C-210ENST00000566290 GPR31O00270 319 aa14.07□□□□□ -0.16
RAB40C-210ENST00000566290 HS3ST1O14792 307 aa14.07□□□□□ -0.16
RAB40C-210ENST00000566290 ATP6V1G1O75348 118 aa14.07□□□□□ -0.16
RAB40C-210ENST00000566290 SCTP09683 121 aa14.07□□□□□ -0.16
RAB40C-210ENST00000566290 CXCL2P19875 107 aa14.07□□□□□ -0.16
RAB40C-210ENST00000566290 PI3P19957 117 aa14.07□□□□□ -0.16
RAB40C-210ENST00000566290 TNFSF4P23510 183 aa14.07□□□□□ -0.16
RAB40C-210ENST00000566290 SERPINF1P36955 418 aa14.07□□□□□ -0.16
RAB40C-210ENST00000566290 TMEM187Q14656 261 aa14.07□□□□□ -0.16
RAB40C-210ENST00000566290 C6orf183Q5T699 404 aa14.07□□□□□ -0.16
RAB40C-210ENST00000566290 PRAMEF6Q5VXH4 476 aa14.07□□□□□ -0.16
RAB40C-210ENST00000566290 TEX261Q6UWH6 196 aa14.07□□□□□ -0.16
RAB40C-210ENST00000566290 C20orf204Q6ZNR8 217 aa14.07□□□□□ -0.16
RAB40C-210ENST00000566290 C22orf34Q6ZV56 151 aa14.07□□□□□ -0.16
RAB40C-210ENST00000566290 BATF2Q8N1L9 274 aa14.07□□□□□ -0.16
RAB40C-210ENST00000566290 PPP1R35Q8TAP8 253 aa14.07□□□□□ -0.16
RAB40C-210ENST00000566290 PPP1R1CQ8WVI7 109 aa14.07□□□□□ -0.16
RAB40C-210ENST00000566290 IL22RA2Q969J5 263 aa14.07□□□□□ -0.16
RAB40C-210ENST00000566290 ZFP57Q9NU63 452 aa14.07□□□□□ -0.16
RAB40C-210ENST00000566290 U3KQ87 197 aa14.07□□□□□ -0.16
RAB40C-210ENST00000566290 CHD3Q12873 2000 aaKnown RBP14.07□□□□□ -0.16
RAB40C-210ENST00000566290 DPRXA6NFQ7 191 aa14.06□□□□□ -0.16
RAB40C-210ENST00000566290 SIRPB1O00241 398 aa14.06□□□□□ -0.16
RAB40C-210ENST00000566290 MPC2O95563 127 aa14.06□□□□□ -0.16
RAB40C-210ENST00000566290 PSMB6P28072 239 aa14.06□□□□□ -0.16
RAB40C-210ENST00000566290 OPCMLQ14982 345 aa14.06□□□□□ -0.16
RAB40C-210ENST00000566290 SLC9A3R2Q15599 337 aa14.06□□□□□ -0.16
RAB40C-210ENST00000566290 CR1LQ2VPA4 569 aa14.06□□□□□ -0.16
RAB40C-210ENST00000566290 FAM209AQ5JX71 171 aa14.06□□□□□ -0.16
RAB40C-210ENST00000566290 LIAT1Q6ZQX7 453 aa14.06□□□□□ -0.16
RAB40C-210ENST00000566290 LRP11Q86VZ4 500 aa14.06□□□□□ -0.16
RAB40C-210ENST00000566290 LGI3Q8N145 548 aa14.06□□□□□ -0.16
RAB40C-210ENST00000566290 KCNRGQ8N5I3 272 aa14.06□□□□□ -0.16
RAB40C-210ENST00000566290 OR10J5Q8NHC4 309 aa14.06□□□□□ -0.16
RAB40C-210ENST00000566290 LRRC29Q8WV35 223 aa14.06□□□□□ -0.16
RAB40C-210ENST00000566290 TOMM40LQ969M1 308 aa14.06□□□□□ -0.16
RAB40C-210ENST00000566290 LRRC46Q96FV0 321 aa14.06□□□□□ -0.16
RAB40C-210ENST00000566290 AKR1E2Q96JD6 320 aa14.06□□□□□ -0.16
RAB40C-210ENST00000566290 OR2V2Q96R30 315 aa14.06□□□□□ -0.16
RAB40C-210ENST00000566290 DUSP13Q9UII6 198 aa14.06□□□□□ -0.16
RAB40C-210ENST00000566290 OOEPA6NGQ2 149 aa14.05□□□□□ -0.16
RAB40C-210ENST00000566290 MPPED1O15442 326 aa14.05□□□□□ -0.16
RAB40C-210ENST00000566290 PSPNO60542 156 aa14.05□□□□□ -0.16
RAB40C-210ENST00000566290 ZNF737O75373 536 aa14.05□□□□□ -0.16
RAB40C-210ENST00000566290 IFNA7P01567 189 aa14.05□□□□□ -0.16
RAB40C-210ENST00000566290 IFNA21P01568 189 aa14.05□□□□□ -0.16
RAB40C-210ENST00000566290 S100GP29377 79 aa14.05□□□□□ -0.16
RAB40C-210ENST00000566290 GNRHRP30968 328 aa14.05□□□□□ -0.16
RAB40C-210ENST00000566290 OR3A1P47881 315 aa14.05□□□□□ -0.16
RAB40C-210ENST00000566290 SNRPD2P62316 118 aaKnown RBP14.05□□□□□ -0.16
RAB40C-210ENST00000566290 NCMAPQ5T1S8 102 aa14.05□□□□□ -0.16
RAB40C-210ENST00000566290 ZNF826PQ6ZT77 177 aa14.05□□□□□ -0.16
RAB40C-210ENST00000566290 GCSAMQ8N6F7 178 aa14.05□□□□□ -0.16
RAB40C-210ENST00000566290 ZNF565Q8N9K5 539 aa14.05□□□□□ -0.16
RAB40C-210ENST00000566290 BVESQ8NE79 360 aa14.05□□□□□ -0.16
RAB40C-210ENST00000566290 THAP6Q8TBB0 222 aa14.05□□□□□ -0.16
RAB40C-210ENST00000566290 MSI2Q96DH6 328 aaKnown RBP14.05□□□□□ -0.16
RAB40C-210ENST00000566290 WDR89Q96FK6 387 aaPredicted RBP14.05□□□□□ -0.16
RAB40C-210ENST00000566290 TMEM56Q96MV1 263 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms