RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 TMEM30BQ3MIR4 351 aa12.99□□□□□ -0.33
RAB40C-208ENST00000564703 PLAC9Q5JTB6 97 aa12.99□□□□□ -0.33
RAB40C-208ENST00000564703 CLVS1Q8IUQ0 354 aaPredicted RBP12.99□□□□□ -0.33
RAB40C-208ENST00000564703 ZDHHC22Q8N966 263 aa12.99□□□□□ -0.33
RAB40C-208ENST00000564703 BEND2Q8NDZ0 799 aa12.99□□□□□ -0.33
RAB40C-208ENST00000564703 SLC25A46Q96AG3 418 aa12.99□□□□□ -0.33
RAB40C-208ENST00000564703 GALMQ96C23 342 aa12.99□□□□□ -0.33
RAB40C-208ENST00000564703 DUX5Q96PT3 197 aa12.99□□□□□ -0.33
RAB40C-208ENST00000564703 C12orf4Q9NQ89 552 aa12.99□□□□□ -0.33
RAB40C-208ENST00000564703 TNFRSF19Q9NS68 423 aa12.99□□□□□ -0.33
RAB40C-208ENST00000564703 MBNL3Q9NUK0 354 aaKnown RBP12.99□□□□□ -0.33
RAB40C-208ENST00000564703 RHBDL2Q9NX52 303 aa12.99□□□□□ -0.33
RAB40C-208ENST00000564703 DPM3Q9P2X0 92 aa12.99□□□□□ -0.33
RAB40C-208ENST00000564703 GNG12Q9UBI6 72 aa12.99□□□□□ -0.33
RAB40C-208ENST00000564703 SPATA2Q9UM82 520 aa12.99□□□□□ -0.33
RAB40C-208ENST00000564703 POMT1Q9Y6A1 747 aa12.99□□□□□ -0.33
RAB40C-208ENST00000564703 DNAJC9-AS1A6NH13 148 aa12.98□□□□□ -0.33
RAB40C-208ENST00000564703 FOXI3A8MTJ6 420 aaPredicted RBP12.98□□□□□ -0.33
RAB40C-208ENST00000564703 RNF212BA8MTL3 300 aa12.98□□□□□ -0.33
RAB40C-208ENST00000564703 SERPINE3A8MV23 424 aa12.98□□□□□ -0.33
RAB40C-208ENST00000564703 ODF3BA8MYP8 253 aa12.98□□□□□ -0.33
RAB40C-208ENST00000564703 LEUTXA8MZ59 168 aa12.98□□□□□ -0.33
RAB40C-208ENST00000564703 C15orf65H3BRN8 121 aa12.98□□□□□ -0.33
RAB40C-208ENST00000564703 GABARAPO95166 117 aa12.98□□□□□ -0.33
RAB40C-208ENST00000564703 NAPSAO96009 420 aa12.98□□□□□ -0.33
RAB40C-208ENST00000564703 HBZP02008 142 aa12.98□□□□□ -0.33
RAB40C-208ENST00000564703 GNB3P16520 340 aa12.98□□□□□ -0.33
RAB40C-208ENST00000564703 IER3P46695 156 aa12.98□□□□□ -0.33
RAB40C-208ENST00000564703 SLC9A3R2Q15599 337 aa12.98□□□□□ -0.33
RAB40C-208ENST00000564703 SSX2Q16385 188 aa12.98□□□□□ -0.33
RAB40C-208ENST00000564703 CTF1Q16619 201 aa12.98□□□□□ -0.33
RAB40C-208ENST00000564703 MOGAT2Q3SYC2 334 aa12.98□□□□□ -0.33
RAB40C-208ENST00000564703 CDNFQ49AH0 187 aa12.98□□□□□ -0.33
RAB40C-208ENST00000564703 BAIAP2L2Q6UXY1 529 aa12.98□□□□□ -0.33
RAB40C-208ENST00000564703 MOB1BQ7L9L4 216 aa12.98□□□□□ -0.33
RAB40C-208ENST00000564703 LHFPL4Q7Z7J7 247 aa12.98□□□□□ -0.33
RAB40C-208ENST00000564703 TMEM86BQ8N661 226 aa12.98□□□□□ -0.33
RAB40C-208ENST00000564703 UBALD1Q8TB05 177 aa12.98□□□□□ -0.33
RAB40C-208ENST00000564703 KCTD12Q96CX2 325 aaKnown RBP12.98□□□□□ -0.33
RAB40C-208ENST00000564703 NAA50Q9GZZ1 169 aaKnown RBP12.98□□□□□ -0.33
RAB40C-208ENST00000564703 MEGF9Q9H1U4 602 aa12.98□□□□□ -0.33
RAB40C-208ENST00000564703 ZNF286AQ9HBT8 521 aa12.98□□□□□ -0.33
RAB40C-208ENST00000564703 OR2S2Q9NQN1 319 aa12.98□□□□□ -0.33
RAB40C-208ENST00000564703 PSG11Q9UQ72 335 aa12.98□□□□□ -0.33
RAB40C-208ENST00000564703 AMMECR1Q9Y4X0 333 aaPredicted RBP12.98□□□□□ -0.33
RAB40C-208ENST00000564703 ZFHX3Q15911 3703 aa12.98□□□□□ -0.33
RAB40C-208ENST00000564703 CLDN34H7C241 214 aa12.97□□□□□ -0.33
RAB40C-208ENST00000564703 J3QR06 171 aa12.97□□□□□ -0.33
RAB40C-208ENST00000564703 IGHV3-7P01780 117 aa12.97□□□□□ -0.33
RAB40C-208ENST00000564703 CRYBA1P05813 215 aa12.97□□□□□ -0.33
RAB40C-208ENST00000564703 HIST1H1DP16402 221 aaKnown RBP12.97□□□□□ -0.33
RAB40C-208ENST00000564703 ARHGDIBP52566 201 aa12.97□□□□□ -0.33
RAB40C-208ENST00000564703 TMBIM6P55061 237 aa12.97□□□□□ -0.33
RAB40C-208ENST00000564703 UBA52P62987 128 aaKnown RBP12.97□□□□□ -0.33
RAB40C-208ENST00000564703 C16orf87Q6PH81 154 aa12.97□□□□□ -0.33
RAB40C-208ENST00000564703 LDLRAD3Q86YD5 345 aa12.97□□□□□ -0.33
RAB40C-208ENST00000564703 OR5H6Q8NGV6 325 aa12.97□□□□□ -0.33
RAB40C-208ENST00000564703 OR5R1Q8NH85 324 aa12.97□□□□□ -0.33
RAB40C-208ENST00000564703 OR1L1Q8NH94 360 aa12.97□□□□□ -0.33
RAB40C-208ENST00000564703 FAM216AQ8WUB2 273 aa12.97□□□□□ -0.33
RAB40C-208ENST00000564703 RAB2BQ8WUD1 216 aa12.97□□□□□ -0.33
RAB40C-208ENST00000564703 C17orf50Q8WW18 174 aa12.97□□□□□ -0.33
RAB40C-208ENST00000564703 LEAP2Q969E1 77 aa12.97□□□□□ -0.33
RAB40C-208ENST00000564703 S100A16Q96FQ6 103 aaKnown RBP12.97□□□□□ -0.33
RAB40C-208ENST00000564703 SSX3Q99909 188 aa12.97□□□□□ -0.33
RAB40C-208ENST00000564703 DCSTAMPQ9H295 470 aa12.97□□□□□ -0.33
RAB40C-208ENST00000564703 ESM1Q9NQ30 184 aa12.97□□□□□ -0.33
RAB40C-208ENST00000564703 ABCB10Q9NRK6 738 aa12.97□□□□□ -0.33
RAB40C-208ENST00000564703 GFOD1Q9NXC2 390 aa12.97□□□□□ -0.33
RAB40C-208ENST00000564703 ZNRD1Q9P1U0 126 aa12.97□□□□□ -0.33
RAB40C-208ENST00000564703 HILPDAQ9Y5L2 63 aa12.97□□□□□ -0.33
RAB40C-208ENST00000564703 TRBV6-6A0A0A6YYG2 114 aa12.96□□□□□ -0.33
RAB40C-208ENST00000564703 IGHV3-43A0A0B4J1X8 118 aa12.96□□□□□ -0.33
RAB40C-208ENST00000564703 BUB1B-PAK6H3BSN5 160 aa12.96□□□□□ -0.33
RAB40C-208ENST00000564703 F2RL2O00254 374 aa12.96□□□□□ -0.33
RAB40C-208ENST00000564703 RGS11O94810 467 aa12.96□□□□□ -0.33
RAB40C-208ENST00000564703 IGHV3-43DP0DP04 118 aa12.96□□□□□ -0.33
RAB40C-208ENST00000564703 GNG10P50151 68 aa12.96□□□□□ -0.33
RAB40C-208ENST00000564703 PITPNAQ00169 270 aa12.96□□□□□ -0.33
RAB40C-208ENST00000564703 AANATQ16613 207 aa12.96□□□□□ -0.33
RAB40C-208ENST00000564703 HLA-DRB5Q30154 266 aa12.96□□□□□ -0.33
RAB40C-208ENST00000564703 MZT2AQ6P582 158 aa12.96□□□□□ -0.33
RAB40C-208ENST00000564703 OR10X1Q8NGY0 326 aa12.96□□□□□ -0.33
RAB40C-208ENST00000564703 IL1F10Q8WWZ1 152 aa12.96□□□□□ -0.33
RAB40C-208ENST00000564703 ACOT12Q8WYK0 555 aa12.96□□□□□ -0.33
RAB40C-208ENST00000564703 AP3S1Q92572 193 aa12.96□□□□□ -0.33
RAB40C-208ENST00000564703 MMP28Q9H239 520 aa12.96□□□□□ -0.33
RAB40C-208ENST00000564703 ANK3Q12955 4377 aaKnown RBP12.96□□□□□ -0.34
RAB40C-208ENST00000564703 A0A0A6YYH2 397 aa12.95□□□□□ -0.34
RAB40C-208ENST00000564703 SMIM31A0A1B0GVY4 71 aa12.95□□□□□ -0.34
RAB40C-208ENST00000564703 A6NJ64 397 aa12.95□□□□□ -0.34
RAB40C-208ENST00000564703 MFNGO00587 321 aa12.95□□□□□ -0.34
RAB40C-208ENST00000564703 IGLV1-47P01700 117 aa12.95□□□□□ -0.34
RAB40C-208ENST00000564703 IGHV4-59P01825 116 aa12.95□□□□□ -0.34
RAB40C-208ENST00000564703 RNASE1P07998 156 aaKnown RBP12.95□□□□□ -0.34
RAB40C-208ENST00000564703 GSTP1P09211 210 aaKnown RBP12.95□□□□□ -0.34
RAB40C-208ENST00000564703 SOX6P35712 828 aa12.95□□□□□ -0.34
RAB40C-208ENST00000564703 LOXL3P58215 753 aa12.95□□□□□ -0.34
RAB40C-208ENST00000564703 HTD2P86397 168 aa12.95□□□□□ -0.34
RAB40C-208ENST00000564703 LRRC75BQ2VPJ9 315 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms