RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 Q6ZPA2 131 aa6.16□□□□□ -1.42
HERPUD1-209ENST00000564678 LDLRAD3Q86YD5 345 aa6.16□□□□□ -1.42
HERPUD1-209ENST00000564678 C17orf78Q8N4C9 275 aa6.16□□□□□ -1.42
HERPUD1-209ENST00000564678 ZADH2Q8N4Q0 377 aa6.16□□□□□ -1.42
HERPUD1-209ENST00000564678 BHLHE23Q8NDY6 225 aa6.16□□□□□ -1.42
HERPUD1-209ENST00000564678 ABHD5Q8WTS1 349 aa6.16□□□□□ -1.42
HERPUD1-209ENST00000564678 C18orf12Q96KH6 178 aa6.16□□□□□ -1.42
HERPUD1-209ENST00000564678 TMEM100Q9NV29 134 aa6.16□□□□□ -1.42
HERPUD1-209ENST00000564678 PEMTQ9UBM1 199 aa6.16□□□□□ -1.42
HERPUD1-209ENST00000564678 GLS2Q9UI32 602 aa6.16□□□□□ -1.42
HERPUD1-209ENST00000564678 DUXBA0A1W2PPF3 345 aa6.16□□□□□ -1.42
HERPUD1-209ENST00000564678 TMEM210A6NLX4 147 aa6.16□□□□□ -1.42
HERPUD1-209ENST00000564678 E5RGE8 158 aa6.16□□□□□ -1.42
HERPUD1-209ENST00000564678 AVPP01185 164 aa6.16□□□□□ -1.42
HERPUD1-209ENST00000564678 DUSP1P28562 367 aa6.16□□□□□ -1.42
HERPUD1-209ENST00000564678 GNRHRP30968 328 aa6.16□□□□□ -1.42
HERPUD1-209ENST00000564678 ERVK11-1P61568 191 aa6.16□□□□□ -1.42
HERPUD1-209ENST00000564678 SRSF6Q13247 344 aaKnown RBP6.16□□□□□ -1.42
HERPUD1-209ENST00000564678 DEFB109BQ30KR1 87 aa6.16□□□□□ -1.42
HERPUD1-209ENST00000564678 STPG2Q8N412 459 aa6.16□□□□□ -1.42
HERPUD1-209ENST00000564678 SUMF2Q8NBJ7 301 aa6.16□□□□□ -1.42
HERPUD1-209ENST00000564678 RELL2Q8NC24 303 aaPredicted RBP6.16□□□□□ -1.42
HERPUD1-209ENST00000564678 OR5T2Q8NGG2 359 aa6.16□□□□□ -1.42
HERPUD1-209ENST00000564678 OR4A4PQ8NGN8 299 aa6.16□□□□□ -1.42
HERPUD1-209ENST00000564678 NEK7Q8TDX7 302 aa6.16□□□□□ -1.42
HERPUD1-209ENST00000564678 MRPL24Q96A35 216 aaKnown RBP6.16□□□□□ -1.42
HERPUD1-209ENST00000564678 PIGMQ9H3S5 423 aa6.16□□□□□ -1.42
HERPUD1-209ENST00000564678 NSG2Q9Y328 171 aa6.16□□□□□ -1.42
HERPUD1-209ENST00000564678 C3orf85A0A1B0GTC6 90 aa6.15□□□□□ -1.43
HERPUD1-209ENST00000564678 RAB19A4D1S5 217 aa6.15□□□□□ -1.43
HERPUD1-209ENST00000564678 GPR31O00270 319 aa6.15□□□□□ -1.43
HERPUD1-209ENST00000564678 DEGS1O15121 323 aa6.15□□□□□ -1.43
HERPUD1-209ENST00000564678 LYZL6O75951 148 aa6.15□□□□□ -1.43
HERPUD1-209ENST00000564678 JTBO76095 146 aa6.15□□□□□ -1.43
HERPUD1-209ENST00000564678 GAPDHP04406 335 aaKnown RBP6.15□□□□□ -1.43
HERPUD1-209ENST00000564678 HKR1P10072 659 aa6.15□□□□□ -1.43
HERPUD1-209ENST00000564678 TNFRSF1AP19438 455 aa6.15□□□□□ -1.43
HERPUD1-209ENST00000564678 S100GP29377 79 aa6.15□□□□□ -1.43
HERPUD1-209ENST00000564678 RPL12P30050 165 aaKnown RBP6.15□□□□□ -1.43
HERPUD1-209ENST00000564678 GATA4P43694 442 aa6.15□□□□□ -1.43
HERPUD1-209ENST00000564678 IDH3GP51553 393 aaPredicted RBP6.15□□□□□ -1.43
HERPUD1-209ENST00000564678 S100A10P60903 97 aa6.15□□□□□ -1.43
HERPUD1-209ENST00000564678 TCF15Q12870 199 aa6.15□□□□□ -1.43
HERPUD1-209ENST00000564678 ZNF169Q14929 603 aaPredicted RBP6.15□□□□□ -1.43
HERPUD1-209ENST00000564678 P2RY6Q15077 328 aa6.15□□□□□ -1.43
HERPUD1-209ENST00000564678 EIF2S3LQ2VIR3 472 aaKnown RBP6.15□□□□□ -1.43
HERPUD1-209ENST00000564678 PHLDA2Q53GA4 152 aa6.15□□□□□ -1.43
HERPUD1-209ENST00000564678 GPR157Q5UAW9 335 aa6.15□□□□□ -1.43
HERPUD1-209ENST00000564678 ZNF585AQ6P3V2 769 aa6.15□□□□□ -1.43
HERPUD1-209ENST00000564678 UQCC3Q6UW78 93 aa6.15□□□□□ -1.43
HERPUD1-209ENST00000564678 MOB1BQ7L9L4 216 aa6.15□□□□□ -1.43
HERPUD1-209ENST00000564678 GCNT2Q8N0V5 402 aa6.15□□□□□ -1.43
HERPUD1-209ENST00000564678 FAM71E2Q8N5Q1 922 aa6.15□□□□□ -1.43
HERPUD1-209ENST00000564678 ZNF565Q8N9K5 539 aa6.15□□□□□ -1.43
HERPUD1-209ENST00000564678 RNASE8Q8TDE3 154 aaKnown RBP6.15□□□□□ -1.43
HERPUD1-209ENST00000564678 TMEM171Q8WVE6 324 aa6.15□□□□□ -1.43
HERPUD1-209ENST00000564678 TMEM56Q96MV1 263 aa6.15□□□□□ -1.43
HERPUD1-209ENST00000564678 BCL2L14Q9BZR8 327 aa6.15□□□□□ -1.43
HERPUD1-209ENST00000564678 OR2J1Q9GZK6 312 aa6.15□□□□□ -1.43
HERPUD1-209ENST00000564678 DLL3Q9NYJ7 618 aa6.15□□□□□ -1.43
HERPUD1-209ENST00000564678 TMEM56-RWDD3S4R434 201 aa6.15□□□□□ -1.43
HERPUD1-209ENST00000564678 CACNA1GO43497 2377 aa6.15□□□□□ -1.43
HERPUD1-209ENST00000564678 TRAV24A0A0B4J272 114 aa6.14□□□□□ -1.43
HERPUD1-209ENST00000564678 MSGN1A6NI15 193 aa6.14□□□□□ -1.43
HERPUD1-209ENST00000564678 B8ZZF3 427 aa6.14□□□□□ -1.43
HERPUD1-209ENST00000564678 NPIPB11E5RHQ5 1161 aa6.14□□□□□ -1.43
HERPUD1-209ENST00000564678 TEX46H3BTG2 121 aa6.14□□□□□ -1.43
HERPUD1-209ENST00000564678 K7EPK0 472 aa6.14□□□□□ -1.43
HERPUD1-209ENST00000564678 ST8SIA3O43173 380 aa6.14□□□□□ -1.43
HERPUD1-209ENST00000564678 PHF1O43189 567 aaPredicted RBP6.14□□□□□ -1.43
HERPUD1-209ENST00000564678 ZNHIT1O43257 154 aa6.14□□□□□ -1.43
HERPUD1-209ENST00000564678 SCAF4O95104 1147 aaKnown RBP6.14□□□□□ -1.43
HERPUD1-209ENST00000564678 CDS2O95674 445 aa6.14□□□□□ -1.43
HERPUD1-209ENST00000564678 WNT2P09544 360 aa6.14□□□□□ -1.43
HERPUD1-209ENST00000564678 SCTP09683 121 aa6.14□□□□□ -1.43
HERPUD1-209ENST00000564678 ZNF146Q15072 292 aa6.14□□□□□ -1.43
HERPUD1-209ENST00000564678 SP6Q3SY56 376 aa6.14□□□□□ -1.43
HERPUD1-209ENST00000564678 ACSF3Q4G176 576 aaPredicted RBP6.14□□□□□ -1.43
HERPUD1-209ENST00000564678 SPIN3Q5JUX0 258 aa6.14□□□□□ -1.43
HERPUD1-209ENST00000564678 Q6P435 159 aa6.14□□□□□ -1.43
HERPUD1-209ENST00000564678 LYZL2Q7Z4W2 148 aa6.14□□□□□ -1.43
HERPUD1-209ENST00000564678 CMTM1Q8IZ96 169 aa6.14□□□□□ -1.43
HERPUD1-209ENST00000564678 GAPTQ8N292 157 aa6.14□□□□□ -1.43
HERPUD1-209ENST00000564678 CNEP1R1Q8N9A8 125 aa6.14□□□□□ -1.43
HERPUD1-209ENST00000564678 SPERTQ8NA61 448 aa6.14□□□□□ -1.43
HERPUD1-209ENST00000564678 C9orf106Q8NAJ2 232 aa6.14□□□□□ -1.43
HERPUD1-209ENST00000564678 SCCPDHQ8NBX0 429 aa6.14□□□□□ -1.43
HERPUD1-209ENST00000564678 OR1J1Q8NGS3 322 aa6.14□□□□□ -1.43
HERPUD1-209ENST00000564678 SLC25A40Q8TBP6 338 aa6.14□□□□□ -1.43
HERPUD1-209ENST00000564678 MRPL30Q8TCC3 161 aaKnown RBP6.14□□□□□ -1.43
HERPUD1-209ENST00000564678 MARC2Q969Z3 335 aa6.14□□□□□ -1.43
HERPUD1-209ENST00000564678 ABHD14BQ96IU4 210 aa6.14□□□□□ -1.43
HERPUD1-209ENST00000564678 SCNM1Q9BWG6 230 aa6.14□□□□□ -1.43
HERPUD1-209ENST00000564678 TMEM222Q9H0R3 208 aa6.14□□□□□ -1.43
HERPUD1-209ENST00000564678 JKAMPQ9P055 326 aa6.14□□□□□ -1.43
HERPUD1-209ENST00000564678 EP300Q09472 2414 aaPredicted RBP6.14□□□□□ -1.43
HERPUD1-209ENST00000564678 ESPL1Q14674 2120 aa6.14□□□□□ -1.43
HERPUD1-209ENST00000564678 MBD3L5A6NJ08 208 aaPredicted RBP6.14□□□□□ -1.43
HERPUD1-209ENST00000564678 SH2D1BO14796 132 aa6.14□□□□□ -1.43
HERPUD1-209ENST00000564678 PGA5P0DJD9 388 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms